BLASTX nr result

ID: Ephedra26_contig00022326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00022326
         (750 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004290977.1| PREDICTED: F-box protein At3g12350-like [Fra...    67   8e-09
ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...    62   2e-07
ref|XP_006433642.1| hypothetical protein CICLE_v10001174mg [Citr...    60   1e-06
ref|XP_006472308.1| PREDICTED: F-box protein At3g12350-like isof...    58   4e-06
ref|XP_006472307.1| PREDICTED: F-box protein At3g12350-like isof...    58   4e-06
gb|EMJ24304.1| hypothetical protein PRUPE_ppa005379mg [Prunus pe...    57   7e-06
ref|XP_003630313.1| F-box protein, partial [Medicago truncatula]...    57   9e-06

>ref|XP_004290977.1| PREDICTED: F-box protein At3g12350-like [Fragaria vesca subsp.
           vesca]
          Length = 452

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
 Frame = +3

Query: 228 DGMSVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGP-WMNLCRQRWGDVLDV 404
           D +S  + PED    I   L    + +    SK   ++  ++G  W ++C +RWG    +
Sbjct: 13  DTVSFSDFPEDVQLCILSFLTPPEISSFACTSKRFVSLCKNDGKLWFSMCDRRWGSRTQI 72

Query: 405 AQLRGETHSAKSLYSALNRLSNLVGLWNAQELYPRGGLLYFHWGHLCLVASRVWSRTDG- 581
            +  G   + ++LY  L+R  NL+G W          L++F WG   L  SRV    DG 
Sbjct: 73  KKWGGGKIAYRNLYQTLSRWENLIGFWRQGGQATSPPLIFFEWGPSFLAGSRVSPAKDGG 132

Query: 582 -NVVLRPFFKVPIPFGGSFKIYFLSEESKVLVPAELIWSSK 701
             VV  PF  + +   G   + FL  E +  + AE + S +
Sbjct: 133 YGVVKAPFLWMSLSPEGQV-VNFLDPEGRAEISAEELSSGR 172


>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 51/155 (32%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
 Frame = +3

Query: 237 SVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGP-WMNLCRQRWGDVLDV--- 404
           S  + PED    I   L    +  L   SK M ++ +++   W ++C +RWG    +   
Sbjct: 11  SFTDFPEDIQVCILSFLGPPEIATLACTSKRMGSLCATDSKLWFSMCERRWGSYTRITQW 70

Query: 405 AQLRGETHSAKSLYSALNRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW- 566
           AQ +  T S K LY+ L+R  NL+G W       R G     LL+F WG   + ASRV  
Sbjct: 71  AQGKNPTLSFKHLYNTLHRWENLLGFWR------RSGTGIPSLLFFEWGPSFISASRVSP 124

Query: 567 SRTDGNVVLRPFFKVPIPFGGSFKIYFLSEESKVL 671
           S +D N V     K P      F    LSEE  V+
Sbjct: 125 SASDSNSVTYGVTKTP------FLWMSLSEEGHVV 153


>ref|XP_006433642.1| hypothetical protein CICLE_v10001174mg [Citrus clementina]
           gi|557535764|gb|ESR46882.1| hypothetical protein
           CICLE_v10001174mg [Citrus clementina]
          Length = 442

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
 Frame = +3

Query: 225 MDGMSVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGP-WMNLCRQRWGDVLD 401
           M+  S  + PED    +   L  + +      SK   ++ +S+   W ++C +RWG   +
Sbjct: 1   MESFSFSDFPEDVQLTVLSFLSPKEIATFACTSKRFGSLCNSDDKLWYSMCERRWGAETE 60

Query: 402 VAQLRGETHSAKSLYSALNRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW 566
           + +      + K LY  L+   NL+G W      P        L++F WG   L  SRV 
Sbjct: 61  IKKWGDGKIAYKLLYKTLSECENLIGFWRRSGGQPAVNFSSPPLIFFEWGPSFLAGSRVS 120

Query: 567 SRTDG--NVVLRPFFKVPIPFGGSFKIYFLSEESKV 668
              DG  NV+  PF  + +   G   + FL    ++
Sbjct: 121 PSHDGTYNVLKSPFLWMSLSPDGEM-VNFLQPNGEI 155


>ref|XP_006472308.1| PREDICTED: F-box protein At3g12350-like isoform X2 [Citrus
           sinensis]
          Length = 294

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
 Frame = +3

Query: 225 MDGMSVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGP-WMNLCRQRWGDVLD 401
           M+  S  + PED    +   L  + +      SK   ++  S+   W ++C +RWG    
Sbjct: 1   MESFSFSDFPEDVQLTVLSFLSPKEIATFACTSKRFGSLCKSDDRLWYSMCERRWGAETQ 60

Query: 402 VAQLRGETHSAKSLYSALNRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW 566
           + +      + K LY  L+   NL+G W      P        L++F WG   L  SRV 
Sbjct: 61  IKKWGDGKIAYKLLYKTLSEWENLIGFWRRSGGQPAVNFSSPPLIFFEWGPSFLAGSRVS 120

Query: 567 SRTDG--NVVLRPFFKVPIPFGGSFKIYFLSEESKV 668
              DG  NV+  PF  + +   G   + FL    ++
Sbjct: 121 PSHDGTCNVLKSPFLWMSLSPDGEM-VNFLQPNGEI 155


>ref|XP_006472307.1| PREDICTED: F-box protein At3g12350-like isoform X1 [Citrus
           sinensis]
          Length = 442

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
 Frame = +3

Query: 225 MDGMSVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGP-WMNLCRQRWGDVLD 401
           M+  S  + PED    +   L  + +      SK   ++  S+   W ++C +RWG    
Sbjct: 1   MESFSFSDFPEDVQLTVLSFLSPKEIATFACTSKRFGSLCKSDDRLWYSMCERRWGAETQ 60

Query: 402 VAQLRGETHSAKSLYSALNRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW 566
           + +      + K LY  L+   NL+G W      P        L++F WG   L  SRV 
Sbjct: 61  IKKWGDGKIAYKLLYKTLSEWENLIGFWRRSGGQPAVNFSSPPLIFFEWGPSFLAGSRVS 120

Query: 567 SRTDG--NVVLRPFFKVPIPFGGSFKIYFLSEESKV 668
              DG  NV+  PF  + +   G   + FL    ++
Sbjct: 121 PSHDGTCNVLKSPFLWMSLSPDGEM-VNFLQPNGEI 155


>gb|EMJ24304.1| hypothetical protein PRUPE_ppa005379mg [Prunus persica]
          Length = 464

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
 Frame = +3

Query: 234 MSVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGP-WMNLCRQRWGDVLDVAQ 410
           +S  + PED    +   L    + +    SK   ++  ++G  W ++C +RWG    + +
Sbjct: 18  VSFADFPEDVQLCVLSFLTPPEIASFACTSKRFVSLCKNDGKLWFSMCDRRWGSKTQIKK 77

Query: 411 LRGETHSAKSLYSALNRLSNLVGLWNAQELYPRGGLLYFHWGHLCLVASRVWSRTDG--N 584
                 + + LY  L+   NL+G W    +     L++F WG   +   RV    DG   
Sbjct: 78  WGNGKITYRILYQTLSDWENLIGFWRQGGIVTSPPLIFFEWGPSFMTGFRVSPAKDGTYG 137

Query: 585 VVLRPFFKVPIPFGGSFKIYFLSEESKVLVPAELIWSSKKEKF 713
           VV  PF  + +   G   + FL  E +  + +E   +SK+ KF
Sbjct: 138 VVKAPFLWMSLSPEGQV-VNFLDPEGRTEI-SEDFANSKRFKF 178


>ref|XP_003630313.1| F-box protein, partial [Medicago truncatula]
           gi|355524335|gb|AET04789.1| F-box protein, partial
           [Medicago truncatula]
          Length = 468

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
 Frame = +3

Query: 225 MDGMSVWELPEDSLTDICKRLDVESLLNLGLVSKAMNAVASSEGPWMNLCRQRWGDVLDV 404
           +D   +  LP+D    + + L    + NL L  K++ A+ASSE  W+  C     D++D+
Sbjct: 9   LDSSPLIHLPDDVFATVSRYLIPREVFNLSLCCKSLYALASSEKVWLTQC-----DIIDI 63

Query: 405 AQLRG--ETHSAKSLYSALNR----LSNLVGLWNAQELYPRGGLLYFHWGHLCLVASRVW 566
             L+   E     S Y AL R    + +L+G+W  Q+    G L+Y   G + +VA RV 
Sbjct: 64  VSLKDLVEWRVCVSSYKALCRFLLSVKSLLGIW-VQQNPELGNLVYVMPGFVSIVACRVI 122

Query: 567 SR-------TDGNVVLRPFFKVPIPFGGSFKIYFL 650
            +        D +++  P F++   F GS  ++FL
Sbjct: 123 PQEVVSLGIKDCSILWSPVFEIVCDFDGS-NMFFL 156


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