BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00022101
         (842 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006847033.1| hypothetical protein AMTR_s00017p00179100 [A...   108   2e-21
ref|XP_002878225.1| hypothetical protein ARALYDRAFT_486304 [Arab...   100   1e-18
ref|NP_567068.1| plant organelle RNA recognition domain-containi...   100   1e-18
gb|AAM61144.1| unknown [Arabidopsis thaliana]                         100   1e-18
emb|CAB68190.1| putative protein [Arabidopsis thaliana]               100   1e-18
gb|EXB57748.1| hypothetical protein L484_006861 [Morus notabilis]      99   1e-18
ref|XP_006402780.1| hypothetical protein EUTSA_v10006002mg [Eutr...    98   4e-18
ref|XP_006292874.1| hypothetical protein CARUB_v10019134mg [Caps...    98   4e-18
ref|XP_002531167.1| conserved hypothetical protein [Ricinus comm...    98   4e-18
dbj|BAH20043.1| AT3G58520 [Arabidopsis thaliana]                       97   7e-18
emb|CBI29972.3| unnamed protein product [Vitis vinifera]               96   2e-17
ref|XP_002281091.1| PREDICTED: uncharacterized protein LOC100255...    96   2e-17
ref|XP_002309284.1| hypothetical protein POPTR_0006s21060g [Popu...    96   2e-17
ref|XP_004146449.1| PREDICTED: uncharacterized protein LOC101212...    91   4e-16
ref|NP_001154682.1| plant organelle RNA recognition domain-conta...    91   7e-16
gb|EOY09590.1| Ubiquitin carboxyl-terminal hydrolase family prot...    90   9e-16
ref|XP_006840497.1| hypothetical protein AMTR_s00045p00194830 [A...    89   2e-15
ref|XP_006844748.1| hypothetical protein AMTR_s00016p00255910 [A...    86   1e-14
ref|XP_006351233.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE...    84   5e-14
gb|EOY18717.1| Ubiquitin carboxyl-terminal hydrolase family prot...    83   1e-13

>ref|XP_006847033.1| hypothetical protein AMTR_s00017p00179100 [Amborella trichopoda]
           gi|548850062|gb|ERN08614.1| hypothetical protein
           AMTR_s00017p00179100 [Amborella trichopoda]
          Length = 415

 Score =  108 bits (271), Expect = 2e-21
 Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
 Frame = +1

Query: 298 YGNRRYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISV-LDKKRWE 474
           +  +R L K RLK+  N+  DH+   +  +  +  IK+ IK     GC  S     ++  
Sbjct: 20  FSQKRGLVKVRLKWVKNRGLDHIIDNETDLKAVSLIKDAIKR-SSSGCLSSTSFSDRQKH 78

Query: 475 LRLQIRVSKFMKRYPTIFKEFKGPKYNVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLC 654
           L L I V +F++RYPTIF+EF+G KYNVPWFRLT  AL  D +E  + +  E   VE+LC
Sbjct: 79  LGLTIPVLRFIRRYPTIFEEFRGLKYNVPWFRLTKTALLLDEQEQRIYKTHEPDLVERLC 138

Query: 655 RIXXXXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRD 834
           R+                        Y++V+T++P Y D       P+    + L++WR+
Sbjct: 139 RLLMMLSSRSIPLQAIDYLKWDMGLPYDFVKTILPNYSDQFRMIKQPNGRLAIALSRWRE 198

Query: 835 EF 840
           EF
Sbjct: 199 EF 200


>ref|XP_002878225.1| hypothetical protein ARALYDRAFT_486304 [Arabidopsis lyrata subsp.
           lyrata] gi|297324063|gb|EFH54484.1| hypothetical protein
           ARALYDRAFT_486304 [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 4   MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 63

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 64  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 123

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KWRDEF
Sbjct: 124 RTKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 179


>ref|NP_567068.1| plant organelle RNA recognition domain-containing protein
           [Arabidopsis thaliana] gi|15810016|gb|AAL06935.1|
           AT3g58520/F14P22_110 [Arabidopsis thaliana]
           gi|22135767|gb|AAM91040.1| AT3g58520/F14P22_110
           [Arabidopsis thaliana] gi|332646273|gb|AEE79794.1| plant
           organelle RNA recognition domain-containing protein
           [Arabidopsis thaliana]
          Length = 418

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 87

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 88  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 147

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KWRDEF
Sbjct: 148 RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 203


>gb|AAM61144.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 1   MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 60

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 61  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 120

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KWRDEF
Sbjct: 121 RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 176


>emb|CAB68190.1| putative protein [Arabidopsis thaliana]
          Length = 394

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 4   MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 63

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 64  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 123

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KWRDEF
Sbjct: 124 RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 179


>gb|EXB57748.1| hypothetical protein L484_006861 [Morus notabilis]
          Length = 438

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
 Frame = +1

Query: 289 NCTYGNRRYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKR 468
           N  +   R + K RLK+  N+  DH+  +D  +     +K+ IK  P        +   +
Sbjct: 36  NLLHQQWRSITKVRLKWVKNRSLDHIIDKDTDLKAASLLKDAIKRSPTGFLTAKSVADWQ 95

Query: 469 WELRLQIRVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVE 645
             L L + V +FM+RYPTIF EF   +Y N+P FRLTD AL  D +E AV E  E  +VE
Sbjct: 96  KLLGLTVPVLRFMRRYPTIFHEFPHARYTNLPCFRLTDTALLLDSQEQAVHEERESETVE 155

Query: 646 KLCRIXXXXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAK 825
           +LCR+                         N+ + +V KYPD   F    +   CLRL +
Sbjct: 156 RLCRLLMMMKTRTLPLKSLYPIKWDLGLPDNFDKVLVLKYPDCFRFVKASNGLSCLRLEQ 215

Query: 826 WRDEF 840
           WR+EF
Sbjct: 216 WREEF 220


>ref|XP_006402780.1| hypothetical protein EUTSA_v10006002mg [Eutrema salsugineum]
           gi|557103879|gb|ESQ44233.1| hypothetical protein
           EUTSA_v10006002mg [Eutrema salsugineum]
          Length = 419

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 87

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 88  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 147

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L  WRDEF
Sbjct: 148 RTRTISLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVNWRDEF 203


>ref|XP_006292874.1| hypothetical protein CARUB_v10019134mg [Capsella rubella]
           gi|482561581|gb|EOA25772.1| hypothetical protein
           CARUB_v10019134mg [Capsella rubella]
          Length = 418

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 28  MAKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 87

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 88  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 147

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KW DEF
Sbjct: 148 RTKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWHDEF 203


>ref|XP_002531167.1| conserved hypothetical protein [Ricinus communis]
           gi|223529237|gb|EEF31210.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 430

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
 Frame = +1

Query: 310 RYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQI 489
           R + K RLK+  N+  DH+   +  +     +K+ IK  P        +   +  L L +
Sbjct: 35  RSIVKVRLKWVKNRSLDHIIDRETDLKAACLLKDAIKRSPTGFLTAKSVADWQKLLGLTV 94

Query: 490 RVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXX 666
            V +F++RYPT+F EF   +Y N+P FRLTD AL  D +E ++ +  E  +VE+LCR+  
Sbjct: 95  PVLRFLRRYPTLFSEFPHARYTNLPCFRLTDTALLLDSQEQSIHQNYERDTVERLCRLLM 154

Query: 667 XXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                  N+ R ++PK+PDY  +    +   CLRLA+WR+EF
Sbjct: 155 MMKSRTVPLQSLHPLKWDLGLPDNFERILIPKHPDYFQYVRASNGVGCLRLAQWREEF 212


>dbj|BAH20043.1| AT3G58520 [Arabidopsis thaliana]
          Length = 418

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P        +   +  L L + V
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 87

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
            +F++RYPT+F EF   +Y ++P F+LTD AL  D +E  + ++    +VE+LCR+    
Sbjct: 88  LRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHGADTVERLCRVLMMM 147

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KWRDEF
Sbjct: 148 RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 203


>emb|CBI29972.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
 Frame = +1

Query: 310 RYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQI 489
           R + + RLK+  N+  DH+   +  +  +  +K+ IK         + +   +  L L +
Sbjct: 27  RGIVRVRLKWVKNRSLDHIIDTETDLKAVCLLKDAIKRSSSGFLASNSVANWQKLLGLTV 86

Query: 490 RVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXX 666
            V +FM+RYPT+F EF  PKY ++P FRLTD AL    +E ++ +  E  +VE+LC++  
Sbjct: 87  PVLRFMRRYPTLFHEFPHPKYPSLPCFRLTDTALMLHSQEESIHQTHEADTVERLCKVLM 146

Query: 667 XXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                  +Y RT++PKYPD+       +  PCLRL  WR+EF
Sbjct: 147 MMKTSMVPLQSLSPLKWDLGLPDDYHRTLIPKYPDHFRVIKASNGVPCLRLGGWREEF 204


>ref|XP_002281091.1| PREDICTED: uncharacterized protein LOC100255516 [Vitis vinifera]
          Length = 425

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
 Frame = +1

Query: 310 RYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQI 489
           R + + RLK+  N+  DH+   +  +  +  +K+ IK         + +   +  L L +
Sbjct: 27  RGIVRVRLKWVKNRSLDHIIDTETDLKAVCLLKDAIKRSSSGFLASNSVANWQKLLGLTV 86

Query: 490 RVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXX 666
            V +FM+RYPT+F EF  PKY ++P FRLTD AL    +E ++ +  E  +VE+LC++  
Sbjct: 87  PVLRFMRRYPTLFHEFPHPKYPSLPCFRLTDTALMLHSQEESIHQTHEADTVERLCKVLM 146

Query: 667 XXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                  +Y RT++PKYPD+       +  PCLRL  WR+EF
Sbjct: 147 MMKTSMVPLQSLSPLKWDLGLPDDYHRTLIPKYPDHFRVIKASNGVPCLRLGGWREEF 204


>ref|XP_002309284.1| hypothetical protein POPTR_0006s21060g [Populus trichocarpa]
           gi|222855260|gb|EEE92807.1| hypothetical protein
           POPTR_0006s21060g [Populus trichocarpa]
          Length = 431

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
 Frame = +1

Query: 310 RYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQI 489
           R + K RLK+  N+  D++   +  +     +K+ IK  P        + + +  L L +
Sbjct: 36  RSIVKVRLKWVKNRSLDNIIDTETDLKAACLLKDAIKRSPTGFLTAKSVSEWQKLLGLTV 95

Query: 490 RVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXX 666
            V +FM+RYPT+F EF   +Y N+P FRLTD AL  D +E  + +  E  +VE+LCR+  
Sbjct: 96  PVLRFMRRYPTLFNEFPHAQYTNLPCFRLTDTALLLDSQEQTIHQTYESDTVERLCRVLM 155

Query: 667 XXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                  N+ + ++PKYPD+  F   P+    LRL +W +EF
Sbjct: 156 MMKSQTVPLQSLHPLKWDLGLPVNFEKVLIPKYPDHFQFAKAPNGTRSLRLVQWHEEF 213


>ref|XP_004146449.1| PREDICTED: uncharacterized protein LOC101212487 [Cucumis sativus]
          Length = 423

 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
 Frame = +1

Query: 298 YGNRRYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWEL 477
           Y   R + K RLK+  N+  DH+   +  +     +K  IK           +   +  L
Sbjct: 23  YHQWRGIAKVRLKWVKNRSLDHIIDTETDLKAACLLKNAIKRSSTGFITAKSIANWQKLL 82

Query: 478 RLQIRVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLC 654
            L I V +F++RYPT+F EF   +Y N+P FR+TD AL  D+EE ++ +  E  +VE+LC
Sbjct: 83  GLTIPVIRFIRRYPTLFHEFPHSRYANLPCFRMTDTALLLDQEEGSIHQFHESDTVERLC 142

Query: 655 RIXXXXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRD 834
           R+                         ++ R++VP+YPD+       +   CLRL +WR+
Sbjct: 143 RVLMMMKTRTVPLQSLRPLEWDLGLPCDFERSLVPRYPDHFRLVKASNGDWCLRLKEWRE 202

Query: 835 EF 840
           EF
Sbjct: 203 EF 204


>ref|NP_001154682.1| plant organelle RNA recognition domain-containing protein
           [Arabidopsis thaliana] gi|332646274|gb|AEE79795.1| plant
           organelle RNA recognition domain-containing protein
           [Arabidopsis thaliana]
          Length = 406

 Score = 90.5 bits (223), Expect = 7e-16
 Identities = 59/176 (33%), Positives = 82/176 (46%), Gaps = 1/176 (0%)
 Frame = +1

Query: 316 LEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRV 495
           + K RLK+  NK  DHV   +  +     +K+ IK  P  G  I       W        
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPT-GITIRENFNCYWN------- 79

Query: 496 SKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXXXX 672
               KRYPT+F EF   +Y ++P F+LTD AL  D +E  + ++ E  +VE+LCR+    
Sbjct: 80  ----KRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMM 135

Query: 673 XXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDEF 840
                                NY +T+V KYPD+  F    +  PCL+L KWRDEF
Sbjct: 136 RSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 191


>gb|EOY09590.1| Ubiquitin carboxyl-terminal hydrolase family protein [Theobroma
           cacao]
          Length = 422

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
 Frame = +1

Query: 310 RYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQI 489
           R + K RLK+  N+  DHV   +  +     +K+ IK  P            +  L L +
Sbjct: 26  RSIVKVRLKWVKNRSLDHVIDTETDLKAACLLKDAIKRSPTGFLTAKSFADWQKLLGLTV 85

Query: 490 RVSKFMKRYPTIFKEFKGPKY-NVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRIXX 666
            V +F++RYPT+F+EF   +Y N+P FRLT  AL  D +E ++ +A E  ++E+LCR+  
Sbjct: 86  PVLRFLRRYPTLFEEFPHARYANLPCFRLTGTALLLDSQEQSIHQAHESDTIERLCRLLM 145

Query: 667 XXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAKWRDE 837
                                  N+ + ++PK+PD+  F   P     +RL +WR+E
Sbjct: 146 MMKSRTAPLQSLHPLKWDLGLPDNFEKVLIPKFPDHFRFVKAPIGVAAVRLVQWREE 202


>ref|XP_006840497.1| hypothetical protein AMTR_s00045p00194830 [Amborella trichopoda]
           gi|548842215|gb|ERN02172.1| hypothetical protein
           AMTR_s00045p00194830 [Amborella trichopoda]
          Length = 370

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = +1

Query: 331 LKYKTNKMFDHVTVEDIT--VMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRVSKF 504
           +K+K ++  D + V D    +  ++ +K++I   PD   PIS + KK +EL + IRV+ F
Sbjct: 1   MKWKKDRYLDSLPVLDKIHDLKAIFAVKDYIIKEPDFCIPISCISKKNFELGIPIRVATF 60

Query: 505 MKRYPTIFKEFKGPKYNVPWFRLTDDALEKDREEMAVLEAEEMRSVEKLCRI 660
           +++YPTIFKE  G KYN+PWFRLT +A++ D EE AV +      +++L ++
Sbjct: 61  LRKYPTIFKEVTGEKYNLPWFRLTQEAIDLDSEEQAVYQNHLSDFIDRLKKL 112


>ref|XP_006844748.1| hypothetical protein AMTR_s00016p00255910 [Amborella trichopoda]
           gi|548847219|gb|ERN06423.1| hypothetical protein
           AMTR_s00016p00255910 [Amborella trichopoda]
          Length = 396

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
 Frame = +1

Query: 292 CTYGNRRYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWIKNYPDQGCPISVLDKKRW 471
           C Y  R  L   +LK+  + + D V   +  +  + ++K+ I    D   P+  L K+R 
Sbjct: 16  CYYQQRFSLVNIKLKWVKDPVLDTVVAMEKDLKAVCELKDMICRQADGCLPVYQLSKRRR 75

Query: 472 ELRLQIRVSKFMKRYPTIFKEFKGPKYNVP--WFRLTDDALEKDREEMAVLEAEEMRSVE 645
           ++ ++IRVS+FM+RYPTIF EF   +   P  WF+LT +A     EE    E  E  +V+
Sbjct: 76  QMDIEIRVSRFMRRYPTIFHEFIRHQNGCPLHWFKLTQEARSLHEEEQRWQEVTEEGTVQ 135

Query: 646 KLCRIXXXXXXXXXXXXXXXXXXXXXXXXYNYVRTVVPKYPDYLHFDYIPDRGPCLRLAK 825
           +LC++                         +Y R ++P+YP    F  + D    L+L+ 
Sbjct: 136 RLCKLLMLTKQRTLPLQTIDQLRWDMGLVQDYDRGLIPRYPQLFEFVKLEDDRIGLQLSH 195

Query: 826 W 828
           W
Sbjct: 196 W 196


>ref|XP_006351233.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X1
           [Solanum tuberosum]
          Length = 409

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 13/134 (9%)
 Frame = +1

Query: 253 RASFSANHENLWN-----CTYGNRRYLEKFRLKYKTNKMFDHVTVEDITVMRMWKIKEWI 417
           ++S    HE L++     C+Y  R+      +K+K +  FD +     T+ R  ++K  I
Sbjct: 9   KSSVPLLHEVLFSDHPLPCSYTQRQTYVDVYMKWKKDSFFDSID----TIHRSVQLKPLI 64

Query: 418 -------KNYPDQGC-PISVLDKKRWELRLQIRVSKFMKRYPTIFKEFKGPKYNVPWFRL 573
                   + P+  C PISV+ KK  EL + I+V++F++ YP++F+EF GP YN+PWF+L
Sbjct: 65  ALKNCIVSSSPNDYCIPISVISKKGLELGIPIKVARFLRLYPSVFEEFTGPNYNLPWFKL 124

Query: 574 TDDALEKDREEMAV 615
           T  A+E DREE  V
Sbjct: 125 TQRAIELDREEREV 138


>gb|EOY18717.1| Ubiquitin carboxyl-terminal hydrolase family protein [Theobroma
           cacao]
          Length = 367

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 38/99 (38%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = +1

Query: 331 LKYKTNKMFDHVTV--EDITVMRMWKIKEWIKNYPDQGCPISVLDKKRWELRLQIRVSKF 504
           +K+K +  FD +    + I +  + ++K +I   P    PIS + K+  E  + I+V++F
Sbjct: 1   MKWKKDPFFDSIMHIHKSIELKPIIQLKNFIAKDPSGCIPISAVSKRGLEFDISIKVARF 60

Query: 505 MKRYPTIFKEFKGPKYNVPWFRLTDDALEKDREEMAVLE 621
           +++YP++F+EF+GP+YN+PWFRLT +A E DREE  V +
Sbjct: 61  LRQYPSVFEEFRGPEYNLPWFRLTPEAAEIDREEKRVFD 99