BLASTX nr result

ID: Ephedra26_contig00021947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021947
         (1816 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY12782.1| Uncharacterized protein isoform 1 [Theobroma caca...    60   4e-06
ref|XP_006582257.1| PREDICTED: micronuclear linker histone polyp...    59   7e-06

>gb|EOY12782.1| Uncharacterized protein isoform 1 [Theobroma cacao]
            gi|508720886|gb|EOY12783.1| Uncharacterized protein
            isoform 1 [Theobroma cacao]
          Length = 423

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 69/291 (23%), Positives = 114/291 (39%), Gaps = 17/291 (5%)
 Frame = -1

Query: 1552 DRWSFLEGMDAPKWADLSLEGRIRMETCNNDSWFETVHPCHQLSLKELVSPSPFRGK-GK 1376
            D W+FLE ++AP W DL+LE ++  +  + D WF+T H  H  S ++L S     G+ G 
Sbjct: 8    DHWAFLEEIEAPMWVDLTLEAKLNSQDIDGD-WFQTSHLFHHCSSRKLKSAFSRSGEDGV 66

Query: 1375 NKFLKV-------SPDAVSDTRGEPFTNKVLGKTIKERRKTKFKFSSSFNNQPSLAGPSW 1217
            N  L +        P +VS +RG+ + +K       +      K     N + S     +
Sbjct: 67   NSELDLVGASSPTLPQSVSRSRGKDYRSKKWKGDCHDGSLNNIKPVKVLNGKFSRLDSGY 126

Query: 1216 MKRSLPTIHIESEMGPSCSNQPSVSNLPEIINPKAQEKILDKVLLRGVVSNFETRMKGEV 1037
             +   P +   S  G S S    VS +                         ET  +  V
Sbjct: 127  GEEIKPKLSFVSLKGASSSKTSLVSEIT------------------------ETNTRSTV 162

Query: 1036 ANDSNCGESSREEPMPLPVKSRISSLSSEEALSKRQSSNESETCCPCQSSDCNSTKVDLQ 857
             ++S      +++     V SR    SS   LS R S  +S    P    + N+ + + +
Sbjct: 163  TSES---VQQQQQQKTFEVSSRGFGQSSGLLLSVRSSLRKSCITRPASRVEINADRRESR 219

Query: 856  -KPINNNWTSNSSQTHNSEDASKSS--------GTDGSVNIGTQTLALKPK 731
             +  +++ +S  S + +  D  +SS         T  S N+   T A K K
Sbjct: 220  DRKSSSSKSSVGSSSFSGHDVKRSSIALIKRKEHTPDSRNVARMTEAAKNK 270


>ref|XP_006582257.1| PREDICTED: micronuclear linker histone polyprotein-like [Glycine max]
          Length = 568

 Score = 58.9 bits (141), Expect = 7e-06
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
 Frame = -1

Query: 1552 DRWSFLEGMDAPKWADLSLEGRIRMETCNNDSWFETVHPCHQLSLKELVSPSPFRGKGKN 1373
            D W+FLE ++AP W DL+LE +       +D WF T HP HQ+S +EL S    R     
Sbjct: 16   DPWAFLEHIEAPMWVDLTLEVKSGCVDTGDDEWFNTSHPFHQMSARELKS----RFSHGE 71

Query: 1372 KFLKVS------PDAVSDTRGEPFTNK 1310
            + L         P +VS +RG+ + NK
Sbjct: 72   EILTSGVDSPELPSSVSRSRGKHYNNK 98


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