BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021816
         (543 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002519996.1| hypothetical protein EpeqC_p062 (chloroplast...   123   3e-26
ref|YP_002519742.1| hypothetical protein GnpaC_p015 [Gnetum parv...    80   4e-13
ref|YP_002519736.1| hypothetical protein GnpaC_p007 [Gnetum parv...    80   4e-13
dbj|BAH11177.1| hypothetical protein (chloroplast) [Welwitschia ...    77   2e-12
ref|YP_001876619.1| hypothetical chloroplast RF2 [Welwitschia mi...    77   2e-12

>ref|YP_002519996.1| hypothetical protein EpeqC_p062 (chloroplast) [Ephedra equisetina]
           gi|222139940|ref|YP_002520008.1| hypothetical protein
           EpeqC_p074 (chloroplast) [Ephedra equisetina]
           gi|220983597|dbj|BAH11364.1| hypothetical protein
           (chloroplast) [Ephedra equisetina]
           gi|220983609|dbj|BAH11376.1| hypothetical protein
           (chloroplast) [Ephedra equisetina]
          Length = 2125

 Score =  123 bits (308), Expect = 3e-26
 Identities = 59/68 (86%), Positives = 62/68 (91%)
 Frame = +3

Query: 243 FFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAFAQSLFSELHKNRLRN 422
           FFSSFCKERLFHFCRLKPIVLKR D+ TLLLTNPNQ+SANNTFAFAQSLF ELHKNRL N
Sbjct: 314 FFSSFCKERLFHFCRLKPIVLKRTDRFTLLLTNPNQVSANNTFAFAQSLFYELHKNRLGN 373

Query: 423 QIFDTDKQ 446
           QIFD  K+
Sbjct: 374 QIFDHRKK 381


>ref|YP_002519742.1| hypothetical protein GnpaC_p015 [Gnetum parvifolium]
           gi|512721616|ref|YP_008082235.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
           gi|512721622|ref|YP_008082241.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
           gi|220983484|dbj|BAH11252.1| hypothetical protein
           (chloroplast) [Gnetum parvifolium]
           gi|490345061|gb|AGL11081.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
           gi|490345067|gb|AGL11087.1| hypothetical protein
           (chloroplast) [Gnetum montanum]
          Length = 2185

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
 Frame = +3

Query: 243 FFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTF--AFAQSLFSELHKNRL 416
           F SSFCKE LF FCRLKPIVLKR D+ TL LTNP+Q+SAN +    +   LF EL K +L
Sbjct: 349 FCSSFCKELLFGFCRLKPIVLKRTDRFTLSLTNPSQVSANTSAFDIYYSKLFDELQKQKL 408

Query: 417 RNQIFDTDKQ 446
            NQIF   K+
Sbjct: 409 WNQIFHHRKK 418


>ref|YP_002519736.1| hypothetical protein GnpaC_p007 [Gnetum parvifolium]
           gi|220983478|dbj|BAH11246.1| hypothetical protein
           (chloroplast) [Gnetum parvifolium]
          Length = 2185

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
 Frame = +3

Query: 243 FFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTF--AFAQSLFSELHKNRL 416
           F SSFCKE LF FCRLKPIVLKR D+ TL LTNP+Q+SAN +    +   LF EL K +L
Sbjct: 349 FCSSFCKELLFGFCRLKPIVLKRTDRFTLSLTNPSQVSANTSAFDIYYSKLFDELQKQKL 408

Query: 417 RNQIFDTDKQ 446
            NQIF   K+
Sbjct: 409 WNQIFHHRKK 418


>dbj|BAH11177.1| hypothetical protein (chloroplast) [Welwitschia mirabilis]
           gi|220983417|dbj|BAH11186.1| hypothetical protein
           (chloroplast) [Welwitschia mirabilis]
          Length = 2266

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = +3

Query: 198 SQSNKTGFLFCLGIFFFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAF 377
           SQ +   FL      FFSSFCKE LFHFCRLKPIVLKR D+ TL LTNP+++SA  TFAF
Sbjct: 313 SQRDINQFLCSRLNLFFSSFCKELLFHFCRLKPIVLKRTDRFTLSLTNPSRVSA-KTFAF 371

Query: 378 ---AQSLFSELHKNRLRNQIF 431
                 L  E+   R  NQIF
Sbjct: 372 DIETPHLSYEIPYKRFWNQIF 392


>ref|YP_001876619.1| hypothetical chloroplast RF2 [Welwitschia mirabilis]
           gi|187763154|ref|YP_001876628.1| hypothetical
           chloroplast RF2 [Welwitschia mirabilis]
           gi|163311674|gb|ABY26832.1| hypothetical chloroplast RF2
           [Welwitschia mirabilis] gi|163311684|gb|ABY26842.1|
           hypothetical chloroplast RF2 [Welwitschia mirabilis]
          Length = 2266

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/81 (56%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = +3

Query: 198 SQSNKTGFLFCLGIFFFSSFCKERLFHFCRLKPIVLKRIDKLTLLLTNPNQISANNTFAF 377
           SQ +   FL      FFSSFCKE LFHFCRLKPIVLKR D+ TL LTNP+++SA  TFAF
Sbjct: 313 SQRDINQFLCSRLNLFFSSFCKELLFHFCRLKPIVLKRTDRFTLSLTNPSRVSA-KTFAF 371

Query: 378 ---AQSLFSELHKNRLRNQIF 431
                 L  E+   R  NQIF
Sbjct: 372 DIETPHLSYEIPYKRFWNQIF 392