BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021733
         (943 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76512.1| unknown [Picea sitchensis]                             130   6e-28
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi...   130   7e-28
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr...   129   1e-27
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p...   128   4e-27
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar...   127   6e-27
gb|AAM62704.1| unknown [Arabidopsis thaliana]                         127   6e-27
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ...   125   2e-26
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr...   124   7e-26
ref|XP_006648243.1| PREDICTED: pentatricopeptide repeat-containi...   123   9e-26
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi...   123   9e-26
ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containi...   123   9e-26
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   123   9e-26
ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A...   122   2e-25
ref|NP_001045703.1| Os02g0119700 [Oryza sativa Japonica Group] g...   122   2e-25
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-25
gb|EAY84232.1| hypothetical protein OsI_05614 [Oryza sativa Indi...   122   3e-25
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi...   121   3e-25
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   121   4e-25
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ...   120   7e-25
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   120   1e-24

>gb|ADE76512.1| unknown [Picea sitchensis]
          Length = 224

 Score =  130 bits (328), Expect = 6e-28
 Identities = 67/181 (37%), Positives = 114/181 (62%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           L+ G+ K+      +++Y++M  + C PDVVT+NTLI   SKV  + EA K+ K M+ A 
Sbjct: 35  LMKGYCKINKANEALEIYKKMDAEGCAPDVVTFNTLIFGLSKVAKVDEAKKFLKLMVRAG 94

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PDV+T+TSLMNG+   +G A  A+++LEEM+    +PD   YNTL+ GL   + +  A
Sbjct: 95  HPPDVITYTSLMNGMCR-KGDAMGALALLEEMQQSVCQPDGCTYNTLMHGLCMCQHLHQA 153

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVLLYDLVPPDVARDVLDKS 542
           ++++E + ++++ +    Y AF++ALC + +  +A +V+++VL    +P  VA  VL+ S
Sbjct: 154 LKLYEVLKSKEVDLESGTYAAFLKALCRAGKVAEAYEVFDYVLNRKSLPDVVAYSVLENS 213

Query: 543 M 545
           +
Sbjct: 214 L 214


>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform X1 [Citrus sinensis]
           gi|568825365|ref|XP_006467050.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X2 [Citrus sinensis]
           gi|568825367|ref|XP_006467051.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X3 [Citrus sinensis]
          Length = 465

 Score =  130 bits (327), Expect = 7e-28
 Identities = 67/163 (41%), Positives = 100/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +     V+ VY +M ++  EPD+VTYNTLI   SK G + EA K+ K M++A 
Sbjct: 273 IMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNTLIFGLSKCGRVGEAKKFLKIMVEAG 332

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   EG A  A+++LEEM+ +G  P+   YNTLL GL KSR ME  
Sbjct: 333 FLPDAVTYTSLMNGMCR-EGDALGALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKG 391

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M    + +  A Y   VRALC   +  +A +V+++ +
Sbjct: 392 IELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAV 434



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEM-LDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDA 179
           L+    K R    V +  ++M      +P++VTY  LI +     N+ EA +    + D+
Sbjct: 202 LVKCLCKCRSLTTVYNFVDQMRASLGIKPNLVTYTILIDNVCNTKNLREAMRLVSALSDS 261

Query: 180 DLQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEA 359
             +PD   + ++M G  ++  G  + + V  +MK  G+ PD + YNTL+ GLSK   +  
Sbjct: 262 GFKPDCFVYNTIMKGYCNLSRGG-EVIGVYNKMKEEGVEPDLVTYNTLIFGLSKCGRVGE 320

Query: 360 AVEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHV 488
           A +  + M+      +   Y + +  +C     + A  + E +
Sbjct: 321 AKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLEEM 363


>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
           gi|557527305|gb|ESR38555.1| hypothetical protein
           CICLE_v10025555mg [Citrus clementina]
          Length = 465

 Score =  129 bits (325), Expect = 1e-27
 Identities = 66/163 (40%), Positives = 100/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +     V+ VY +M ++  EPD+VTYNT+I   SK G + EA K+ K M++A 
Sbjct: 273 IMKGYCNLSRGGEVIGVYNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAG 332

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   EG A  A+++LEEM+ +G  P+   YNTLL GL KSR ME  
Sbjct: 333 FLPDAVTYTSLMNGMCR-EGDALGALALLEEMEGKGCSPNSCTYNTLLYGLCKSRLMEKG 391

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M    + +  A Y   VRALC   +  +A +V+++ +
Sbjct: 392 IELYRAMKEGGVKLETAAYATLVRALCRHGKVAEAYEVFDYAV 434



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 34/136 (25%), Positives = 66/136 (48%)
 Frame = +3

Query: 81  EPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDADLQPDVVTFTSLMNGLSHVEGGATDAV 260
           +P++VTY  LI +     N+ EA +    + D+  +PD   + ++M G  ++  G  + +
Sbjct: 229 KPNLVTYTILIDNVCNTKNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGG-EVI 287

Query: 261 SVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAAVEMFETMMTRKIGVNQAGYIAFVRAL 440
            V  +MK  G+ PD + YNT++ GLSK   +  A +  + M+      +   Y + +  +
Sbjct: 288 GVYNKMKEEGVEPDLVTYNTMIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGM 347

Query: 441 CMSKRFMDAQKVYEHV 488
           C     + A  + E +
Sbjct: 348 CREGDALGALALLEEM 363


>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 464

 Score =  128 bits (321), Expect = 4e-27
 Identities = 66/163 (40%), Positives = 102/163 (62%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   + +++VY++M ++  EPD+VTYNTLI   SK G + EA KY   M+++ 
Sbjct: 272 IMKGYCMLSKGSEIIEVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESG 331

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   EG A  AV +LEEM+ +G  P+   YNTLL GL K R ME  
Sbjct: 332 HFPDAVTYTSLMNGMCR-EGNALGAVLLLEEMERKGCSPNSCTYNTLLHGLCKGRLMEKG 390

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + + +A Y   VRALC   R  +A +V+++ +
Sbjct: 391 MELYRAMKSAGMMLEKASYATLVRALCREGRVAEAYEVFDYAV 433


>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
           [Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251570|gb|AEC06664.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 463

 Score =  127 bits (319), Expect = 6e-27
 Identities = 65/163 (39%), Positives = 101/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ GF  +   +  V VY++M ++  EPD +TYNTLI   SK G + EA  Y K M+DA 
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
            +PD  T+TSLMNG+   +G +  A+S+LEEM+ RG  P+   YNTLL GL K+R M+  
Sbjct: 331 YEPDTATYTSLMNGMCR-KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++E M +  + +   GY   VR+L  S +  +A +V+++ +
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQ-KCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDA 179
           L+    K +    V +  +EM D    +PD+V++  LI +     N+ EA     ++ +A
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259

Query: 180 DLQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEA 359
             +PD   + ++M G   +  G+ +AV V ++MK  G+ PDQI YNTL+ GLSK+  +E 
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGS-EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318

Query: 360 AVEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVLLYDLVPPDVARDVL 533
           A    +TM+      + A Y + +  +C     + A  + E +      P D   + L
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376


>gb|AAM62704.1| unknown [Arabidopsis thaliana]
          Length = 463

 Score =  127 bits (319), Expect = 6e-27
 Identities = 65/163 (39%), Positives = 101/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ GF  +   +  V VY++M ++  EPD +TYNTLI   SK G + EA  Y K M+DA 
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
            +PD  T+TSLMNG+   +G +  A+S+LEEM+ RG  P+   YNTLL GL K+R M+  
Sbjct: 331 YEPDTATYTSLMNGMCR-KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++E M +  + +   GY   VR+L  S +  +A +V+++ +
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432



 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQ-KCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDA 179
           L+    K +    V +  +EM D    +PD+V++  LI +     N+ EA     ++ +A
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259

Query: 180 DLQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEA 359
             +PD   + ++M G   +  G+ +AV V ++MK  G+ PDQI YNTL+ GLSK+  +E 
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGS-EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318

Query: 360 AVEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVLLYDLVPPDVARDVL 533
           A    +TM+      + A Y + +  +C     + A  + E +      P D   + L
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376


>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329915|gb|EFH60334.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 462

 Score =  125 bits (314), Expect = 2e-26
 Identities = 64/163 (39%), Positives = 101/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ GF  +   +  + VY++M ++  EPD +TYNTLI   SK G + EA  Y K M+DA 
Sbjct: 270 IMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAG 329

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
            +PD  T+TSLMNG+   +G +  A+S+LEEM+ RG  P+   YNTLL GL K+R M+  
Sbjct: 330 YEPDTATYTSLMNGMCR-KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 388

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++E M +  + +   GY   VR+L  S +  +A +V+++ +
Sbjct: 389 MELYELMKSSGVKLETNGYATLVRSLVKSGKVAEAYEVFDYAV 431



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQ-KCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDA 179
           L+    K +    V +  +EM D    +PD+V++  LI +     N+ EA     ++ +A
Sbjct: 199 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 258

Query: 180 DLQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEA 359
             +PD   + ++M G   +  G+ +A+ V ++MK  G+ PDQI YNTL+ GLSKS  +E 
Sbjct: 259 GFKPDCFLYNTIMKGFCTLSKGS-EAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEE 317

Query: 360 AVEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVLLYDLVPPDVARDVL 533
           A    +TM+      + A Y + +  +C     + A  + E +      P D   + L
Sbjct: 318 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 375


>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
           gi|557110430|gb|ESQ50721.1| hypothetical protein
           EUTSA_v10022683mg [Eutrema salsugineum]
          Length = 462

 Score =  124 bits (310), Expect = 7e-26
 Identities = 62/163 (38%), Positives = 101/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ GF  +   +  + VY++M ++  EPD +TYNTLI   SK G + EA KY + M++A 
Sbjct: 270 IMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVEAG 329

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
            +PD VT+TSLMNG+   +G +  A+S+LEEM+ RG  P+   YNTLL GL K+R M+  
Sbjct: 330 YEPDAVTYTSLMNGMCR-KGASLGALSLLEEMEARGCAPNACTYNTLLYGLCKARLMDKG 388

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + +  + Y   VR L  S +  +A +V+++ +
Sbjct: 389 IELYGLMKSNGVKLESSAYATLVRGLVRSGKVAEAYEVFDYAV 431



 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
 Frame = +3

Query: 39  GVVDVYEEMLDQKCE-----PDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDADLQPDVVT 203
           G +DV  E +D+  E     PD+V+Y  LI +     N+ EA +    + DA  +PD   
Sbjct: 207 GSLDVVYEFIDEMKETFEVKPDLVSYTILIDNVCNSKNLREAMRLVSALGDAGFKPDCFL 266

Query: 204 FTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAAVEMFETM 383
           + ++M G   +  G ++A+ V ++MK  G+ PD+I YNTL+ GLSKS  +E A +  +TM
Sbjct: 267 YNTIMKGFCTLSKG-SEAIIVYKKMKEEGVEPDRITYNTLIFGLSKSGRVEEARKYLQTM 325

Query: 384 MTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHV 488
           +      +   Y + +  +C     + A  + E +
Sbjct: 326 VEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEM 360


>ref|XP_006648243.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like, partial [Oryza brachyantha]
          Length = 235

 Score =  123 bits (309), Expect = 9e-26
 Identities = 64/150 (42%), Positives = 97/150 (64%)
 Frame = +3

Query: 36  AGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDADLQPDVVTFTSL 215
           AGV+ V   M D   EPD+VTYNTL+   ++ G + +A  Y   M  A   PDV+T+TSL
Sbjct: 59  AGVLGVLRRMKDDGVEPDLVTYNTLVFGLARAGMVTKARTYLDAMAAAGHFPDVITYTSL 118

Query: 216 MNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAAVEMFETMMTRK 395
           MNG+  V+G A  A+++LEEM+ +G  P++  YNTLL+GL K++ +E AVE++ +M+   
Sbjct: 119 MNGMC-VKGDALGALALLEEMEAKGCEPNERTYNTLLMGLCKNKKLEKAVEVYRSMVGAG 177

Query: 396 IGVNQAGYIAFVRALCMSKRFMDAQKVYEH 485
           + +    Y  FVRALC + R  DA +V+++
Sbjct: 178 MKLEAPAYATFVRALCRAGRVPDAYEVFDY 207


>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Cucumis sativus]
          Length = 464

 Score =  123 bits (309), Expect = 9e-26
 Identities = 66/163 (40%), Positives = 100/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   A  + VY++M +   EPDVVT+NTLI   SK G + EA  +   M +  
Sbjct: 272 IMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMG 331

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   EG A  A+S+L+EM+ +G  P+   YNTLL GLSKSR ++  
Sbjct: 332 HFPDAVTYTSLMNGMCR-EGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRG 390

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + +  A Y  FVRALC S R  +A +V+++ +
Sbjct: 391 IELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEVFDYAV 433


>ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like, partial [Vitis vinifera]
          Length = 253

 Score =  123 bits (309), Expect = 9e-26
 Identities = 65/163 (39%), Positives = 100/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   +  + VY++M ++  EPD+VTYNTLI   SK G + EA K+   M +  
Sbjct: 61  IMKGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMG 120

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNGL   EG A  A+++LEEM+ +G  P+   YNTLL GL K R +E  
Sbjct: 121 HFPDAVTYTSLMNGLCR-EGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERG 179

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + + +A Y  FVRALC   R  +A + +++V+
Sbjct: 180 IELYGVMKSGGMKLEKASYATFVRALCKEGRVAEAYEAFDYVV 222


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  123 bits (309), Expect = 9e-26
 Identities = 65/163 (39%), Positives = 100/163 (61%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   +  + VY++M ++  EPD+VTYNTLI   SK G + EA K+   M +  
Sbjct: 280 IMKGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMG 339

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNGL   EG A  A+++LEEM+ +G  P+   YNTLL GL K R +E  
Sbjct: 340 HFPDAVTYTSLMNGLCR-EGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERG 398

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + + +A Y  FVRALC   R  +A + +++V+
Sbjct: 399 IELYGVMKSGGMKLEKASYATFVRALCKEGRVAEAYEAFDYVV 441


>ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda]
           gi|548861268|gb|ERN18652.1| hypothetical protein
           AMTR_s00065p00182300 [Amborella trichopoda]
          Length = 470

 Score =  122 bits (306), Expect = 2e-25
 Identities = 64/181 (35%), Positives = 105/181 (58%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   A  + VY++M ++ CEPD+VTYNTLI   S  G    A KY + M++  
Sbjct: 283 IMKGYCLLDRGAEAITVYKKMREEGCEPDLVTYNTLIYGLSNAGKEDIAMKYLRVMVEEG 342

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   +G AT A+ +L+EM+ RG  P+   Y+TLL GL K+ +++  
Sbjct: 343 HLPDTVTYTSLMNGMCR-KGNATGALELLKEMEDRGCEPNSCTYSTLLQGLFKAGNLDKG 401

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVLLYDLVPPDVARDVLDKS 542
           +E++  M    + +  A Y   +RALC  +R  DA +V+++ +    +    A   L+ S
Sbjct: 402 LEVYGVMKEGSMKMEAACYAVILRALCRGERVADAYEVFDYAVASKSLTDVAAYSALESS 461

Query: 543 M 545
           +
Sbjct: 462 L 462


>ref|NP_001045703.1| Os02g0119700 [Oryza sativa Japonica Group]
           gi|41052618|dbj|BAD08127.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|41053255|dbj|BAD07623.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|113535234|dbj|BAF07617.1|
           Os02g0119700 [Oryza sativa Japonica Group]
           gi|125580592|gb|EAZ21523.1| hypothetical protein
           OsJ_05149 [Oryza sativa Japonica Group]
           gi|215766292|dbj|BAG98520.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 367

 Score =  122 bits (306), Expect = 2e-25
 Identities = 62/150 (41%), Positives = 98/150 (65%)
 Frame = +3

Query: 36  AGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDADLQPDVVTFTSL 215
           AGV+ V   M D   EPD+VTYNTL+   ++ G + +A  Y   M  A   PDV+T+TSL
Sbjct: 191 AGVLGVLRRMKDDGVEPDLVTYNTLVFGLARAGMVTKARTYLDAMAAAGHFPDVITYTSL 250

Query: 216 MNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAAVEMFETMMTRK 395
           MNG+  V+G A  A+++LEEM+ +G  P++  YNTLL+GL K++ ++ AV+++++M+   
Sbjct: 251 MNGMC-VKGDAMGALALLEEMEAKGCEPNERTYNTLLMGLCKNKKLDKAVDVYKSMVGAA 309

Query: 396 IGVNQAGYIAFVRALCMSKRFMDAQKVYEH 485
           + +    Y  FVRALC + R  DA +V+++
Sbjct: 310 MKLEAPAYATFVRALCRAGRIPDAYEVFDY 339


>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Cucumis sativus]
          Length = 464

 Score =  122 bits (305), Expect = 3e-25
 Identities = 65/163 (39%), Positives = 99/163 (60%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   A  + VY++M +   EPDVVT+NTLI   SK G + EA  +   M +  
Sbjct: 272 IMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMG 331

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   EG A  A+S+L+EM+ +G  P+   YNTLL GLSKSR ++  
Sbjct: 332 HFPDAVTYTSLMNGMCR-EGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRG 390

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + +  A Y  FVRALC S R  +A + +++ +
Sbjct: 391 IELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEAFDYAV 433


>gb|EAY84232.1| hypothetical protein OsI_05614 [Oryza sativa Indica Group]
          Length = 367

 Score =  122 bits (305), Expect = 3e-25
 Identities = 62/150 (41%), Positives = 98/150 (65%)
 Frame = +3

Query: 36  AGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDADLQPDVVTFTSL 215
           AGV+ V   M D   EPD+VTYNTL+   ++ G + +A  Y   M  A   PDV+T+TSL
Sbjct: 191 AGVLGVLRRMKDDGVEPDLVTYNTLVFGLARAGMVTKARTYLDAMAAAGHFPDVITYTSL 250

Query: 216 MNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAAVEMFETMMTRK 395
           MNG+  V+G A  A+++LEEM+ +G  P++  YNTLL+GL K++ ++ AV+++++M+   
Sbjct: 251 MNGMC-VKGDAMGALALLEEMEAKGCEPNERTYNTLLMGLCKNKKLDKAVDVYKSMVGAA 309

Query: 396 IGVNQAGYIAFVRALCMSKRFMDAQKVYEH 485
           + +    Y  FVRALC + R  DA +V+++
Sbjct: 310 MKLEAPAYATFVRALCRAGRVPDAYEVFDY 339


>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform X1 [Cicer arietinum]
           gi|502155526|ref|XP_004510106.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X2 [Cicer arietinum]
          Length = 468

 Score =  121 bits (304), Expect = 3e-25
 Identities = 66/163 (40%), Positives = 98/163 (60%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+ KM      ++VY +M +   EPD++TYNTLI   SK G + EA K  + M +  
Sbjct: 272 IMKGYCKMGRGNEAIEVYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKG 331

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNGL   +G    A+++LEEM+  G  P+   YNTLL GL KSR  + A
Sbjct: 332 HFPDEVTYTSLMNGLCR-KGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKA 390

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + +  A Y  FVRALC + R  DA +V+++ +
Sbjct: 391 MELYGEMKSGCLKLEMASYATFVRALCRAGRIADAYEVFDYAV 433



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
 Frame = +3

Query: 45  VDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDA-DLQPDVVTFTSLMN 221
           V++ +E+  + C PD+ T+N L+ H  K   +   + +  +M     ++PD+VTFT L++
Sbjct: 180 VELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPDLVTFTILID 239

Query: 222 GLSHVE----------------------------------GGATDAVSVLEEMKTRGIRP 299
            + + +                                  G   +A+ V  +MK  G+ P
Sbjct: 240 NVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAGVEP 299

Query: 300 DQIAYNTLLVGLSKSRDMEAAVEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVY 479
           D I YNTL+ GLSKS  +  A ++   M  +    ++  Y + +  LC     + A  + 
Sbjct: 300 DLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIALL 359

Query: 480 EHV 488
           E +
Sbjct: 360 EEM 362


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  121 bits (303), Expect = 4e-25
 Identities = 60/163 (36%), Positives = 102/163 (62%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   +  + V+++M ++  EPD++TYNTLI   SK G + EA +Y K M+++ 
Sbjct: 266 IMKGYCMLSKGSDAIQVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESG 325

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNGL   +G A  A+++LE+M+ +G  P+   YNTLL GL K R +E  
Sbjct: 326 HFPDAVTYTSLMNGLCR-KGDALGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKG 384

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  +    + ++ A Y  FVRALC   +  +A +V+++ +
Sbjct: 385 IELYNVIKEGGMLLDTASYATFVRALCREGKVAEAYEVFDYAV 427


>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484989|gb|AES66192.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  120 bits (301), Expect = 7e-25
 Identities = 71/198 (35%), Positives = 110/198 (55%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   +  ++VY  M ++  EPD++TYNTLI   SK G + EA K  + M +  
Sbjct: 278 IMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKG 337

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   +G    A+++LEEM+ +G  P+   YNTLL GL KSR  + A
Sbjct: 338 HFPDEVTYTSLMNGMCR-KGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKA 396

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVLLYDLVPPDVARDVLDKS 542
           +E++  M +  + ++ A Y  FVRALC   R  DA +V+++      V      DV   S
Sbjct: 397 MELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYA-----VESKSLSDVAAYS 451

Query: 543 MVVATRRGPMDKHSKARN 596
            + +T +    +  KA N
Sbjct: 452 TLESTLKWSRKQKKKALN 469


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520709|gb|AET01163.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  120 bits (300), Expect = 1e-24
 Identities = 63/163 (38%), Positives = 99/163 (60%)
 Frame = +3

Query: 3   LISGFAKMRYTAGVVDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQMLDAD 182
           ++ G+  +   +  ++VY  M ++  EPD++TYNTLI   SK G + EA K  + M +  
Sbjct: 275 IMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKG 334

Query: 183 LQPDVVTFTSLMNGLSHVEGGATDAVSVLEEMKTRGIRPDQIAYNTLLVGLSKSRDMEAA 362
             PD VT+TSLMNG+   +G    A+++LEEM+ +G  P+   YNTLL GL KSR  + A
Sbjct: 335 HFPDEVTYTSLMNGMCR-KGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKA 393

Query: 363 VEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVYEHVL 491
           +E++  M +  + ++ A Y  FVRALC   R  DA +V+++ +
Sbjct: 394 MELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAV 436



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 35/183 (19%)
 Frame = +3

Query: 45  VDVYEEMLDQKCEPDVVTYNTLIIHYSKVGNMPEAFKYYKQM-LDADLQPDVVTFTSLMN 221
           V++ +E+  + C PD+ +YN L+ +  K   +   + +  +M    D++P++VT+T L++
Sbjct: 183 VELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILID 242

Query: 222 GLSHVEG--GATDAVSVLEE--------------------------------MKTRGIRP 299
            + + +    AT  V +LEE                                MK +G+ P
Sbjct: 243 NVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEP 302

Query: 300 DQIAYNTLLVGLSKSRDMEAAVEMFETMMTRKIGVNQAGYIAFVRALCMSKRFMDAQKVY 479
           D I YNTL+ GLSKS  +  A ++   M  +    ++  Y + +  +C     + A  + 
Sbjct: 303 DLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALL 362

Query: 480 EHV 488
           E +
Sbjct: 363 EEM 365