BLASTX nr result

ID: Ephedra26_contig00021711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021711
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001774030.1| predicted protein [Physcomitrella patens] gi...    57   2e-06
gb|EOY24121.1| SBP family protein [Theobroma cacao]                    56   4e-06
ref|XP_006854019.1| hypothetical protein AMTR_s00048p00028800 [A...    56   6e-06

>ref|XP_001774030.1| predicted protein [Physcomitrella patens]
           gi|162674715|gb|EDQ61220.1| predicted protein
           [Physcomitrella patens]
          Length = 638

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 32/153 (20%)
 Frame = -3

Query: 365 SPFTLVPNNPQTQ--NTIIGNNMGFQA-FDAQT--------------GSAKASRKSTDTL 237
           +P T++P + Q    N + G   GF +  DA                GS K SR++ D  
Sbjct: 51  NPSTVMPESNQYHVFNQLAGGRQGFTSQLDASLPNGADKEIVANNLLGSRKRSREAEDLR 110

Query: 236 STFSPQGKRQCLMSC-SDHHK---PGTV--------STGLRLTFEEERA-TSLPVKSA-- 102
           S +  Q  +Q LM+  S+ H+   PG+V        STGLRLTFE++R  +S PV ++  
Sbjct: 111 SQWQQQ--QQLLMNTVSEFHQNTGPGSVVNPQSTGVSTGLRLTFEDDRLRSSSPVSTSGR 168

Query: 101 IHSSNDILSSISEELGRKLHRERDELDQFLRIQ 3
           + ++    SSI+E  G  L +ERDE++Q L+ Q
Sbjct: 169 LEATKIFTSSIAENFGTHLQQERDEIEQLLKTQ 201


>gb|EOY24121.1| SBP family protein [Theobroma cacao]
          Length = 338

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
 Frame = -3

Query: 248 TDTLSTFSPQGKRQCLMSCSDHHKPGTVSTGLRLTFEEER---------ATSLPVKSAIH 96
           T  +++FS Q +   L+  S  H+P  VSTGLRL+F +++         +     ++ + 
Sbjct: 69  TAPINSFSMQTQPPQLIDLSQLHQPNVVSTGLRLSFGDQQHNLQQNQNQSFQHQQQNLVS 128

Query: 95  SSNDILSSISEELGRKLHRERDELDQFLRIQ 3
           +S+  LS ISE+L  ++ R+R+ELDQFL++Q
Sbjct: 129 NSSAFLSIISEDLATQIKRQREELDQFLQVQ 159


>ref|XP_006854019.1| hypothetical protein AMTR_s00048p00028800 [Amborella trichopoda]
           gi|548857688|gb|ERN15486.1| hypothetical protein
           AMTR_s00048p00028800 [Amborella trichopoda]
          Length = 336

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = -3

Query: 341 NPQTQNTIIGNNMGFQAFDAQTGSAKASRKSTDTLSTFSPQGKRQCLMSCSDHHKP---- 174
           +P   N  +G  + +Q+ + Q  + +  +++ +T +    Q +   +++ +D H+     
Sbjct: 49  SPVFNNAGVGPPIMYQSSN-QAQAGQQRKRARETPNCGLGQQQMPTVINLADLHQQPNSS 107

Query: 173 -GTVSTGLRLTFEEERATSLPVKSAIHSSNDILSSISEELGRKLHRERDELDQFLRIQ 3
            G VSTGLRL F++E+    P  S+   S+ + S +SEEL  +L ++RDE+DQFLR Q
Sbjct: 108 VGVVSTGLRLAFKDEQQ---PTLSSSSLSSSLSSLVSEELSAQLKQQRDEIDQFLRAQ 162


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