BLASTX nr result
ID: Ephedra26_contig00021514
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00021514 (666 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK24494.1| unknown [Picea sitchensis] 62 1e-18 gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus ta... 60 7e-14 ref|XP_001757786.1| predicted protein [Physcomitrella patens] gi... 55 2e-10 ref|XP_001784434.1| predicted protein [Physcomitrella patens] gi... 45 2e-07 ref|XP_001771624.1| predicted protein [Physcomitrella patens] gi... 41 9e-06 >gb|ABK24494.1| unknown [Picea sitchensis] Length = 366 Score = 62.0 bits (149), Expect(2) = 1e-18 Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Frame = -1 Query: 666 LVKPKRILPTLQLDHQ-PLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIRN 490 LVKP+R LP+L L P WA++M+ L+ K+++E+DK+KA SS++L ELD +H ++ Sbjct: 234 LVKPRRPLPSLHLTSSYPSWASSMLRLQSKVKEEIDKKKAGASSSALLHELDCVHSEVKK 293 Query: 489 SILVME 472 +V++ Sbjct: 294 LYIVLD 299 Score = 57.8 bits (138), Expect(2) = 1e-18 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = -3 Query: 493 KLNSRDGDTKVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLSH 317 K +S K+ E+R+ V +LQ + L+K M P+E Q++E+Y+MLVSSRV LLG +H Sbjct: 305 KTSSASNREKMDEVRQSVGQLQGYAETLQKGMIPLENQIKELYRMLVSSRVALLGVFTH 363 >gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus taeda] Length = 136 Score = 60.1 bits (144), Expect(2) = 7e-14 Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Frame = -1 Query: 666 LVKPKRILPTLQLDHQ-PLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIRN 490 LVKP+R LP+L L P WA++M+ L+ K+++E+DK+KA SS++L ELD +H ++ Sbjct: 20 LVKPRRPLPSLHLTSSYPSWASSMLRLQSKVKEEIDKKKAKASSSALLHELDCVHSEVKK 79 Query: 489 SILVME 472 V++ Sbjct: 80 LYNVLD 85 Score = 43.5 bits (101), Expect(2) = 7e-14 Identities = 19/46 (41%), Positives = 31/46 (67%) Frame = -3 Query: 493 KLNSRDGDTKVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKML 356 K NS K+ E+R+ V +LQ+ + L+K M P+E Q++E+Y+ML Sbjct: 91 KANSASNREKMDEVRQSVGQLQRYAEVLQKGMIPLENQIKELYRML 136 >ref|XP_001757786.1| predicted protein [Physcomitrella patens] gi|162691062|gb|EDQ77426.1| predicted protein [Physcomitrella patens] Length = 357 Score = 55.5 bits (132), Expect(2) = 2e-10 Identities = 26/63 (41%), Positives = 46/63 (73%) Frame = -1 Query: 660 KPKRILPTLQLDHQPLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIRNSIL 481 KPKR L L + +Q LWA+++++L+ ++++E DKRK +KGS ++L+ELDN+ +R Sbjct: 229 KPKRPLVNLHVSNQCLWASSLLSLQQRVKEETDKRK-NKGSIALLRELDNVDVLVRRLYE 287 Query: 480 VME 472 V++ Sbjct: 288 VVD 290 Score = 36.6 bits (83), Expect(2) = 2e-10 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%) Frame = -3 Query: 496 QKLNSRDGDTKVSEIREC---VTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGT 326 +K+N R T + + V +L + Q+L + +AP+E+ V E++++L++SR+ LL Sbjct: 291 KKVNERSLFTNTQDSEQLSFLVEELACTSQNLGRGLAPLEECVNELFRLLIASRIALLDL 350 Query: 325 LS 320 LS Sbjct: 351 LS 352 >ref|XP_001784434.1| predicted protein [Physcomitrella patens] gi|162664005|gb|EDQ50741.1| predicted protein [Physcomitrella patens] Length = 361 Score = 44.7 bits (104), Expect(2) = 2e-07 Identities = 20/56 (35%), Positives = 40/56 (71%) Frame = -1 Query: 660 KPKRILPTLQLDHQPLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIR 493 KPKR L +L + W+ ++++L+ +++++ DKRK +KGS ++L+ELD++ +R Sbjct: 234 KPKRPLSSLSVASHYKWSPSLISLQQRVKEDTDKRK-NKGSIALLRELDSVDASVR 288 Score = 36.6 bits (83), Expect(2) = 2e-07 Identities = 17/49 (34%), Positives = 31/49 (63%) Frame = -3 Query: 466 KVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 320 + E+ V +L+K DL + + P+E V E+++ML++SR+ LL +S Sbjct: 309 QAQELALDVDELRKHSSDLGQGLTPLEGHVNELFRMLIASRLALLDIIS 357 >ref|XP_001771624.1| predicted protein [Physcomitrella patens] gi|162677063|gb|EDQ63538.1| predicted protein [Physcomitrella patens] Length = 376 Score = 41.2 bits (95), Expect(2) = 9e-06 Identities = 19/56 (33%), Positives = 38/56 (67%) Frame = -1 Query: 660 KPKRILPTLQLDHQPLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIR 493 KP+R L +L L + W+ ++++L+ K+++E+DK K + GS ++L+EL + +R Sbjct: 229 KPRRPLASLHLANHYKWSGSLVSLQQKVKEEIDKSK-NMGSIALLRELHDTDVSVR 283 Score = 34.7 bits (78), Expect(2) = 9e-06 Identities = 16/48 (33%), Positives = 31/48 (64%) Frame = -3 Query: 463 VSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 320 V+E++ V L+K DL +AP+E V E+++ML+++R+ + +S Sbjct: 305 VAELKIEVEVLRKRSSDLGLGLAPLEIHVNELFRMLIATRLVFIDVIS 352