BLASTX nr result

ID: Ephedra26_contig00021514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021514
         (666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24494.1| unknown [Picea sitchensis]                              62   1e-18
gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus ta...    60   7e-14
ref|XP_001757786.1| predicted protein [Physcomitrella patens] gi...    55   2e-10
ref|XP_001784434.1| predicted protein [Physcomitrella patens] gi...    45   2e-07
ref|XP_001771624.1| predicted protein [Physcomitrella patens] gi...    41   9e-06

>gb|ABK24494.1| unknown [Picea sitchensis]
          Length = 366

 Score = 62.0 bits (149), Expect(2) = 1e-18
 Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -1

Query: 666 LVKPKRILPTLQLDHQ-PLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIRN 490
           LVKP+R LP+L L    P WA++M+ L+ K+++E+DK+KA   SS++L ELD +H  ++ 
Sbjct: 234 LVKPRRPLPSLHLTSSYPSWASSMLRLQSKVKEEIDKKKAGASSSALLHELDCVHSEVKK 293

Query: 489 SILVME 472
             +V++
Sbjct: 294 LYIVLD 299



 Score = 57.8 bits (138), Expect(2) = 1e-18
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = -3

Query: 493 KLNSRDGDTKVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLSH 317
           K +S     K+ E+R+ V +LQ   + L+K M P+E Q++E+Y+MLVSSRV LLG  +H
Sbjct: 305 KTSSASNREKMDEVRQSVGQLQGYAETLQKGMIPLENQIKELYRMLVSSRVALLGVFTH 363


>gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus taeda]
          Length = 136

 Score = 60.1 bits (144), Expect(2) = 7e-14
 Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -1

Query: 666 LVKPKRILPTLQLDHQ-PLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIRN 490
           LVKP+R LP+L L    P WA++M+ L+ K+++E+DK+KA   SS++L ELD +H  ++ 
Sbjct: 20  LVKPRRPLPSLHLTSSYPSWASSMLRLQSKVKEEIDKKKAKASSSALLHELDCVHSEVKK 79

Query: 489 SILVME 472
              V++
Sbjct: 80  LYNVLD 85



 Score = 43.5 bits (101), Expect(2) = 7e-14
 Identities = 19/46 (41%), Positives = 31/46 (67%)
 Frame = -3

Query: 493 KLNSRDGDTKVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKML 356
           K NS     K+ E+R+ V +LQ+  + L+K M P+E Q++E+Y+ML
Sbjct: 91  KANSASNREKMDEVRQSVGQLQRYAEVLQKGMIPLENQIKELYRML 136


>ref|XP_001757786.1| predicted protein [Physcomitrella patens]
           gi|162691062|gb|EDQ77426.1| predicted protein
           [Physcomitrella patens]
          Length = 357

 Score = 55.5 bits (132), Expect(2) = 2e-10
 Identities = 26/63 (41%), Positives = 46/63 (73%)
 Frame = -1

Query: 660 KPKRILPTLQLDHQPLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIRNSIL 481
           KPKR L  L + +Q LWA+++++L+ ++++E DKRK +KGS ++L+ELDN+   +R    
Sbjct: 229 KPKRPLVNLHVSNQCLWASSLLSLQQRVKEETDKRK-NKGSIALLRELDNVDVLVRRLYE 287

Query: 480 VME 472
           V++
Sbjct: 288 VVD 290



 Score = 36.6 bits (83), Expect(2) = 2e-10
 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -3

Query: 496 QKLNSRDGDTKVSEIREC---VTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGT 326
           +K+N R   T   +  +    V +L  + Q+L + +AP+E+ V E++++L++SR+ LL  
Sbjct: 291 KKVNERSLFTNTQDSEQLSFLVEELACTSQNLGRGLAPLEECVNELFRLLIASRIALLDL 350

Query: 325 LS 320
           LS
Sbjct: 351 LS 352


>ref|XP_001784434.1| predicted protein [Physcomitrella patens]
           gi|162664005|gb|EDQ50741.1| predicted protein
           [Physcomitrella patens]
          Length = 361

 Score = 44.7 bits (104), Expect(2) = 2e-07
 Identities = 20/56 (35%), Positives = 40/56 (71%)
 Frame = -1

Query: 660 KPKRILPTLQLDHQPLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIR 493
           KPKR L +L +     W+ ++++L+ +++++ DKRK +KGS ++L+ELD++   +R
Sbjct: 234 KPKRPLSSLSVASHYKWSPSLISLQQRVKEDTDKRK-NKGSIALLRELDSVDASVR 288



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 17/49 (34%), Positives = 31/49 (63%)
 Frame = -3

Query: 466 KVSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 320
           +  E+   V +L+K   DL + + P+E  V E+++ML++SR+ LL  +S
Sbjct: 309 QAQELALDVDELRKHSSDLGQGLTPLEGHVNELFRMLIASRLALLDIIS 357


>ref|XP_001771624.1| predicted protein [Physcomitrella patens]
           gi|162677063|gb|EDQ63538.1| predicted protein
           [Physcomitrella patens]
          Length = 376

 Score = 41.2 bits (95), Expect(2) = 9e-06
 Identities = 19/56 (33%), Positives = 38/56 (67%)
 Frame = -1

Query: 660 KPKRILPTLQLDHQPLWAAAMMNLELKIRDEVDKRKADKGSSSMLQELDNMHXXIR 493
           KP+R L +L L +   W+ ++++L+ K+++E+DK K + GS ++L+EL +    +R
Sbjct: 229 KPRRPLASLHLANHYKWSGSLVSLQQKVKEEIDKSK-NMGSIALLRELHDTDVSVR 283



 Score = 34.7 bits (78), Expect(2) = 9e-06
 Identities = 16/48 (33%), Positives = 31/48 (64%)
 Frame = -3

Query: 463 VSEIRECVTKLQKSVQDLEKKMAPVEKQVQEIYKMLVSSRVTLLGTLS 320
           V+E++  V  L+K   DL   +AP+E  V E+++ML+++R+  +  +S
Sbjct: 305 VAELKIEVEVLRKRSSDLGLGLAPLEIHVNELFRMLIATRLVFIDVIS 352


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