BLASTX nr result
ID: Ephedra26_contig00021373
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00021373
(641 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 267 2e-69
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 257 2e-66
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 243 3e-62
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 243 3e-62
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 241 1e-61
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 239 4e-61
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 239 4e-61
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 238 1e-60
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 236 4e-60
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 236 4e-60
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 236 4e-60
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 235 7e-60
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 234 2e-59
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 227 3e-57
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 226 3e-57
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 226 3e-57
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 225 7e-57
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 225 1e-56
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 225 1e-56
ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi... 224 1e-56
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 267 bits (682), Expect = 2e-69
Identities = 133/167 (79%), Positives = 149/167 (89%)
Frame = +1
Query: 1 AVINQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQY 180
AVIN++KG YNLLVEGTNL AVMG GV+GK TKSNHVIE EQTLGIEAAR IIDEIQY
Sbjct: 1230 AVINKEKGVYNLLVEGTNLKAVMGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQY 1289
Query: 181 TMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASL 360
TM SHGM+ID RHMMLLADVMT+KG++LGITRFGIAKMKDSVLMLASFEKTTD LFDA++
Sbjct: 1290 TMGSHGMTIDARHMMLLADVMTYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAI 1349
Query: 361 HGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
HG VD++EGVSECIIMGIP+P+GTGL KIRQ+V+ LPKL Y P L+
Sbjct: 1350 HGRVDKIEGVSECIIMGIPMPIGTGLFKIRQKVEKLPKLSYGPTPLL 1396
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 257 bits (656), Expect = 2e-66
Identities = 128/163 (78%), Positives = 142/163 (87%)
Frame = +1
Query: 1 AVINQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQY 180
AVINQ+KGKYNLLVEGTNL AVMGTEGVDG+ T SNH+ E + LGIEAAR II EIQY
Sbjct: 1226 AVINQEKGKYNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQY 1285
Query: 181 TMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASL 360
TM SHGMSID RHMMLLADVMT++G+ILGITRFG+AKMKDSVLMLASFEKTTD LF AS+
Sbjct: 1286 TMGSHGMSIDQRHMMLLADVMTYRGEILGITRFGMAKMKDSVLMLASFEKTTDHLFAASV 1345
Query: 361 HGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAP 489
HG DQ+EGVSECIIMGIP+PLGTGL K+RQ+V +PKL Y P
Sbjct: 1346 HGRTDQIEGVSECIIMGIPMPLGTGLFKVRQKVGRIPKLIYGP 1388
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 243 bits (621), Expect = 3e-62
Identities = 120/167 (71%), Positives = 144/167 (86%)
Frame = +1
Query: 1 AVINQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQY 180
AVI+Q KY+LLVEGTNL AVMGT GVD TKSNH++E+ +TLGIEAARR IIDEIQY
Sbjct: 1222 AVISQTGDKYSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQY 1281
Query: 181 TMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASL 360
TM SHGM+ID RHMMLLAD+MT+KG+ILGITR+GIAKMK SVLMLASFEKT + LF+AS
Sbjct: 1282 TMTSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASY 1341
Query: 361 HGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
G DQ+EGVSECIIMGIP+ LGTG++K+RQR+DHLP+ +Y P+ ++
Sbjct: 1342 SGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1388
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 243 bits (620), Expect = 3e-62
Identities = 117/159 (73%), Positives = 143/159 (89%)
Frame = +1
Query: 25 KYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTMASHGMS 204
KYNLLVEGTNL AVMGT GVD +NTKSNH++E+ TLGIEAARR IIDEIQYTM SHGM+
Sbjct: 1238 KYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMN 1297
Query: 205 IDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHGIVDQVE 384
ID+RHMMLLAD+MT+KG++LGITR+GIAKMK SVLMLASFEKT++ LF+AS G D++E
Sbjct: 1298 IDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIE 1357
Query: 385 GVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
GVSECIIMGIP+ LGTG++K+RQR+DHLP+L+Y P+ ++
Sbjct: 1358 GVSECIIMGIPMQLGTGILKVRQRLDHLPELKYQPDPIL 1396
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 241 bits (615), Expect = 1e-61
Identities = 118/167 (70%), Positives = 141/167 (84%)
Frame = +1
Query: 1 AVINQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQY 180
AVIN KGK NLLVEGTNL AVMGT GVDG+NT SNH++E+E TLGIEAAR+ IIDEIQY
Sbjct: 1216 AVINNVKGKLNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQY 1275
Query: 181 TMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASL 360
TM SHGMSIDLRHMMLLAD+MTF+G +LGI RFGI KMK+SVLMLASFE+T D+LFDA+
Sbjct: 1276 TMKSHGMSIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATT 1335
Query: 361 HGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
G VD + GVSECIIMG+P+ +GTG++ ++QR + L KL Y P+ +I
Sbjct: 1336 RGRVDTIAGVSECIIMGVPMQIGTGILSVQQRPEQLAKLTYGPDPII 1382
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 239 bits (611), Expect = 4e-61
Identities = 120/168 (71%), Positives = 145/168 (86%), Gaps = 1/168 (0%)
Frame = +1
Query: 1 AVINQD-KGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQ 177
AVIN+D K KYNLLVEGT L VMGTEGV G+ T SNH+IE++QTLGIEAAR+CII+EIQ
Sbjct: 1651 AVINKDNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQ 1710
Query: 178 YTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDAS 357
YTMASHGMSID+RHMMLLAD+MTF+G++LGITRFGI KM SVLMLASFEKT D LF+AS
Sbjct: 1711 YTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 1770
Query: 358 LHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
+ G D++EGVSECIIMGIP+ LGTG++K+RQR+ +P+L Y + +I
Sbjct: 1771 VSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPII 1818
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 239 bits (611), Expect = 4e-61
Identities = 120/168 (71%), Positives = 145/168 (86%), Gaps = 1/168 (0%)
Frame = +1
Query: 1 AVINQD-KGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQ 177
AVIN+D K KYNLLVEGT L VMGTEGV G+ T SNH+IE++QTLGIEAAR+CII+EIQ
Sbjct: 1215 AVINKDNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQ 1274
Query: 178 YTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDAS 357
YTMASHGMSID+RHMMLLAD+MTF+G++LGITRFGI KM SVLMLASFEKT D LF+AS
Sbjct: 1275 YTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 1334
Query: 358 LHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
+ G D++EGVSECIIMGIP+ LGTG++K+RQR+ +P+L Y + +I
Sbjct: 1335 VSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPII 1382
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 238 bits (606), Expect = 1e-60
Identities = 116/165 (70%), Positives = 140/165 (84%)
Frame = +1
Query: 7 INQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTM 186
+N +Y LLVEGTNL AVMGT GVD + TKSNH++E QTLGIEAARR IIDEIQYTM
Sbjct: 171 VNNATERYQLLVEGTNLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTM 230
Query: 187 ASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHG 366
SHGM+ID RHMMLLAD+MT+KG+ILGITR+GIAKMK SVLMLASFEKT + LF+AS G
Sbjct: 231 KSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSG 290
Query: 367 IVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
DQ+EGVSECIIMGIP+ LGTG++K+RQR+DH+P+ +Y P+ ++
Sbjct: 291 RQDQIEGVSECIIMGIPMQLGTGILKVRQRLDHVPEFKYQPDPIL 335
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 236 bits (602), Expect = 4e-60
Identities = 115/165 (69%), Positives = 140/165 (84%)
Frame = +1
Query: 7 INQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTM 186
+ + +Y LLVEGTNL AVMGT GVD TKSNH++E QTLGIEAARR IIDEIQYTM
Sbjct: 1226 VKNETERYQLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTM 1285
Query: 187 ASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHG 366
SHGM+ID RHMMLLAD+MT+KG+ILGITR+GIAKMK SVLMLASFEKT++ LF+AS G
Sbjct: 1286 KSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSG 1345
Query: 367 IVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
DQ+EGVSECIIMGIP+ LGTG++K+RQR+DH+P+ +Y P+ ++
Sbjct: 1346 REDQIEGVSECIIMGIPMQLGTGILKVRQRLDHVPEFKYQPDPIL 1390
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 236 bits (602), Expect = 4e-60
Identities = 115/159 (72%), Positives = 138/159 (86%)
Frame = +1
Query: 25 KYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTMASHGMS 204
+Y LLVEGTNL AVMGT GVD TKSNH++E+ +TLGIEAARR IIDEIQYTM SHGM+
Sbjct: 1162 RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMN 1221
Query: 205 IDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHGIVDQVE 384
ID RHMMLLAD+MT+KG+ILGITR+GIAKMK SVLMLASFEKT + LF+AS G DQ+E
Sbjct: 1222 IDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIE 1281
Query: 385 GVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
GVSECIIMGIP+ LGTG++K+RQR+DHLP+ +Y P+ ++
Sbjct: 1282 GVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1320
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 236 bits (602), Expect = 4e-60
Identities = 115/159 (72%), Positives = 138/159 (86%)
Frame = +1
Query: 25 KYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTMASHGMS 204
+Y LLVEGTNL AVMGT GVD TKSNH++E+ +TLGIEAARR IIDEIQYTM SHGM+
Sbjct: 1224 RYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMN 1283
Query: 205 IDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHGIVDQVE 384
ID RHMMLLAD+MT+KG+ILGITR+GIAKMK SVLMLASFEKT + LF+AS G DQ+E
Sbjct: 1284 IDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIE 1343
Query: 385 GVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
GVSECIIMGIP+ LGTG++K+RQR+DHLP+ +Y P+ ++
Sbjct: 1344 GVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1382
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 235 bits (600), Expect = 7e-60
Identities = 119/174 (68%), Positives = 142/174 (81%), Gaps = 7/174 (4%)
Frame = +1
Query: 1 AVINQDKGK-------YNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRC 159
AVI+ +K K Y LLVEGT L VMGTEGVDG+NTK+NH+IE++QTLGIEAAR C
Sbjct: 1004 AVISSEKDKKTDISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTC 1063
Query: 160 IIDEIQYTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTD 339
IIDEI+YTM SHGMSID RHMMLLADVMT +G++LGITRFGI KM SVLMLASFEKT D
Sbjct: 1064 IIDEIEYTMKSHGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMDKSVLMLASFEKTAD 1123
Query: 340 LLFDASLHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
LF+AS++G D++EGVSECIIMGIP+ +GTG++K+RQRVD P L Y P ++
Sbjct: 1124 HLFNASVNGREDKIEGVSECIIMGIPMQIGTGMIKVRQRVDVPPMLSYGPKPIL 1177
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 234 bits (596), Expect = 2e-59
Identities = 116/173 (67%), Positives = 144/173 (83%), Gaps = 6/173 (3%)
Frame = +1
Query: 1 AVINQDKGK------YNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCI 162
AVI ++K K ++LLVEGT L AVMGTEGVDG NTKSNH+IE++Q LGIEAAR+CI
Sbjct: 1227 AVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCI 1286
Query: 163 IDEIQYTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDL 342
I+EI+YTM SHGMSID+RHMMLL D+MTF+G++LGITRFGI KM SVLMLASFEKT D
Sbjct: 1287 IEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADH 1346
Query: 343 LFDASLHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
LF+AS++G D++EGVSEC+IMGIP+PLGTG++K+RQRV +L Y P ++
Sbjct: 1347 LFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAIL 1399
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 227 bits (578), Expect = 3e-57
Identities = 110/159 (69%), Positives = 134/159 (84%)
Frame = +1
Query: 25 KYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTMASHGMS 204
+YNLLVEGTNL V+GT GVD K TKSNH++E+ QTLGIEAARR IIDEI+YT S+ M
Sbjct: 1233 RYNLLVEGTNLLKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMI 1292
Query: 205 IDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHGIVDQVE 384
ID RHMMLLAD+MT+KG++LGITRFGI KMK SVLMLASFEKT + LF+AS G D++E
Sbjct: 1293 IDQRHMMLLADLMTYKGEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIE 1352
Query: 385 GVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPNLLI 501
GVSECIIMGIP+ LG+G++K+RQR+DHLP+ Y P+ +I
Sbjct: 1353 GVSECIIMGIPMTLGSGILKVRQRLDHLPEFNYQPDAII 1391
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 226 bits (577), Expect = 3e-57
Identities = 114/169 (67%), Positives = 139/169 (82%), Gaps = 6/169 (3%)
Frame = +1
Query: 1 AVINQDKGK------YNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCI 162
AV+N KG+ YNLLVEGTNL AV+G GVD TKSNH++E+ QTLGIEAARR I
Sbjct: 943 AVVNPVKGRDKTIERYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSI 1002
Query: 163 IDEIQYTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDL 342
IDEIQYT S+ M IDLRHMMLLAD+MT+KG++LGITR+GIAKMK SVLMLASFEKT++
Sbjct: 1003 IDEIQYTFESNNMIIDLRHMMLLADLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEH 1062
Query: 343 LFDASLHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAP 489
LF+AS G DQ++GVSECIIMGIP+ LGTG++K+RQR++ LP+ +Y P
Sbjct: 1063 LFNASYAGREDQIDGVSECIIMGIPMQLGTGILKVRQRLESLPEFKYQP 1111
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 226 bits (577), Expect = 3e-57
Identities = 114/169 (67%), Positives = 139/169 (82%), Gaps = 6/169 (3%)
Frame = +1
Query: 1 AVINQDKGK------YNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCI 162
AV+N KG+ YNLLVEGTNL AV+G GVD TKSNH++E+ QTLGIEAARR I
Sbjct: 1074 AVVNPVKGRDKTIERYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSI 1133
Query: 163 IDEIQYTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDL 342
IDEIQYT S+ M IDLRHMMLLAD+MT+KG++LGITR+GIAKMK SVLMLASFEKT++
Sbjct: 1134 IDEIQYTFESNNMIIDLRHMMLLADLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEH 1193
Query: 343 LFDASLHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAP 489
LF+AS G DQ++GVSECIIMGIP+ LGTG++K+RQR++ LP+ +Y P
Sbjct: 1194 LFNASYAGREDQIDGVSECIIMGIPMQLGTGILKVRQRLESLPEFKYQP 1242
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 225 bits (574), Expect = 7e-57
Identities = 113/162 (69%), Positives = 140/162 (86%), Gaps = 1/162 (0%)
Frame = +1
Query: 10 NQDKGK-YNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTM 186
N KG+ Y LLVEGT L AVMG EGVDG+ TKSNH++E++ TLGIEAAR IIDEI YTM
Sbjct: 1225 NDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTM 1284
Query: 187 ASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHG 366
+SHGM+IDLRHMMLLAD+MT+KG++LGITR G+ KMKDSVLMLASFEKTTD LF+AS++G
Sbjct: 1285 SSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNG 1344
Query: 367 IVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEYAPN 492
D++EGV+ECIIMGIP+ +GTG+ K+RQRV+H+ +L Y P+
Sbjct: 1345 RDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEHV-ELNYQPD 1385
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 225 bits (573), Expect = 1e-56
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +1
Query: 10 NQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTMA 189
N +K KY LLVEGT L AVMG EG+DG TKSNH+ E++QTLGIEAAR CIIDEI TM
Sbjct: 1239 NGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMK 1298
Query: 190 SHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHGI 369
+HGMSID RHMMLLAD+MTF+G++LGITRFGI KM SVLMLASFEKT D LF+AS++G
Sbjct: 1299 AHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 1358
Query: 370 VDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEY 483
D++EGVSECIIMGIP+PLGTG++KIRQR P L+Y
Sbjct: 1359 DDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKY 1396
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 225 bits (573), Expect = 1e-56
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +1
Query: 10 NQDKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQYTMA 189
N +K KY LLVEGT L AVMG EG+DG TKSNH+ E++QTLGIEAAR CIIDEI TM
Sbjct: 1232 NGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMK 1291
Query: 190 SHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDASLHGI 369
+HGMSID RHMMLLAD+MTF+G++LGITRFGI KM SVLMLASFEKT D LF+AS++G
Sbjct: 1292 AHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 1351
Query: 370 VDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLEY 483
D++EGVSECIIMGIP+PLGTG++KIRQR P L+Y
Sbjct: 1352 DDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKY 1389
>ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi|226517297|gb|ACO63290.1|
predicted protein [Micromonas sp. RCC299]
Length = 1479
Score = 224 bits (572), Expect = 1e-56
Identities = 113/161 (70%), Positives = 134/161 (83%), Gaps = 1/161 (0%)
Frame = +1
Query: 1 AVINQ-DKGKYNLLVEGTNLGAVMGTEGVDGKNTKSNHVIEIEQTLGIEAARRCIIDEIQ 177
AVIN +GKYNL+VEGTNL AVMG EGV G +T +NHV+E E+TLGIEAAR CII EI
Sbjct: 1233 AVINDVGQGKYNLVVEGTNLQAVMGVEGVKGTHTTTNHVMEAERTLGIEAARSCIIKEIN 1292
Query: 178 YTMASHGMSIDLRHMMLLADVMTFKGQILGITRFGIAKMKDSVLMLASFEKTTDLLFDAS 357
TM +HGMSID RH MLLADVMT+KG++LGITRFG+AKMKDSVLMLASFEKTTD LFDA+
Sbjct: 1293 DTMKAHGMSIDARHSMLLADVMTYKGEVLGITRFGMAKMKDSVLMLASFEKTTDHLFDAA 1352
Query: 358 LHGIVDQVEGVSECIIMGIPVPLGTGLMKIRQRVDHLPKLE 480
LHG D ++GVSECIIMGIP+P+GTG+ K++ R L ++
Sbjct: 1353 LHGRTDTIDGVSECIIMGIPMPVGTGMFKLQHRAMRLETMD 1393