BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021282
         (973 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...   130   8e-28
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr...   129   2e-27
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   127   5e-27
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   127   5e-27
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     127   6e-27
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...   127   6e-27
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   125   2e-26
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   124   4e-26
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   124   5e-26
ref|XP_002336862.1| predicted protein [Populus trichocarpa]           123   1e-25
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   122   2e-25
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   120   6e-25
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   120   6e-25
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...   119   1e-24
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar...   119   1e-24
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-24
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...   119   2e-24
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-24
gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus...   118   4e-24
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...   116   1e-23

>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571458531|ref|XP_006581147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score =  130 bits (327), Expect = 8e-28
 Identities = 89/268 (33%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
 Frame = +2

Query: 170 SVSATRSLKNIYPFTSANYNSIHTFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKP 349
           S SA     +I P T  N N     + P+ E  L DK    +K         N +     
Sbjct: 63  SASALVPELDIQPDTPQNPN-----LSPE-ETTLADKFHAAIKE----HHRRNPTPNPNA 112

Query: 350 SNHLQNYLYPNLVTQLSLIET--PVSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSL 523
                N   P+L    S I    P+S +VA RVI++C G ++   IP +  +L FF WS 
Sbjct: 113 PPPTPNLTIPDLSLAFSAISAAHPISPSVAHRVIEKCGGVRHG--IP-FLQSLAFFNWSS 169

Query: 524 QTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSL 703
               + A P + +NE+L L  K  +FD+AW V D M +RG  I   +F  L+  YV   L
Sbjct: 170 SLDGFPASP-EPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGL 228

Query: 704 PDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNL 883
             + V AF RME++G +P +  +  ++  LC      +AQ FF+S K +   DV +Y +L
Sbjct: 229 AAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSL 288

Query: 884 MRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           + GW  A D+  A EV +++K  G++PN
Sbjct: 289 VHGWCRAGDISKAEEVFSDMKMAGIKPN 316


>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
           gi|557094185|gb|ESQ34767.1| hypothetical protein
           EUTSA_v10007329mg [Eutrema salsugineum]
          Length = 534

 Score =  129 bits (323), Expect = 2e-27
 Identities = 77/224 (34%), Positives = 117/224 (52%), Gaps = 3/224 (1%)
 Frame = +2

Query: 305 SVISQVYNKSEGTKPSNHLQN--YLYPNLVTQLSLIETP-VSATVAERVIQRCNGEKNYA 475
           S+I   Y K+  T P++ + N  +  P+L    S I+   +S +V   VI++C G ++  
Sbjct: 67  SIIKDHYRKNP-TNPNDAVLNPSFTLPSLSLDFSQIDASRISPSVVRCVIEKCGGVRHG- 124

Query: 476 IIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIE 655
            IP  + +L FF W+    +Y  K    +NE++ L  K   FD+AW + D M +R   I 
Sbjct: 125 -IPLLQ-SLAFFNWATSRDEYDQKSPHPYNEMIDLAGKVRHFDLAWHLIDLMKSRNVEIS 182

Query: 656 FDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFN 835
            ++F ILI  YV   L  + V  F RME++G  P    +  ++ IL       +AQ FF+
Sbjct: 183 IETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILSRKRRASEAQSFFD 242

Query: 836 SFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           S KDK   DV +Y NL+RGW  A ++  A  V  E+K  G+ PN
Sbjct: 243 SLKDKFEPDVIVYTNLVRGWCRAGEISEAERVFKEMKVAGIEPN 286


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  127 bits (320), Expect = 5e-27
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
 Frame = +2

Query: 251 PDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLIETP--VSA 424
           P  E  + D    L+K+        N +    P+     Y  P+L +  S +     VS 
Sbjct: 47  PTEETLIADTFHSLIKD----HHRNNPNPNPNPAPPNPTYTIPSLSSDFSQLSAAGSVSP 102

Query: 425 TVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFD 604
            V  RV+++C   ++   + +   A+ FF W+   + +   P + +NE++ L  K  +FD
Sbjct: 103 AVVRRVLEKCGAVRHGIPVLQ---AVAFFNWATSREGFEHNP-EPYNEMVDLAGKVRQFD 158

Query: 605 IAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELM 784
           +AW V D M  R   I  ++F IL+  YV   L  + V AF RMEE+G SP    +  ++
Sbjct: 159 LAWHVIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGVSPDRIAFSVVI 218

Query: 785 GILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRP 964
           GILC      +AQ FF+S K K   DV +Y +L+ GW  A ++  A  V  E+KA G+ P
Sbjct: 219 GILCKKRRASEAQAFFDSLKHKFEADVILYTSLVNGWCRAGNIAEAERVFNEMKAAGIEP 278

Query: 965 N 967
           N
Sbjct: 279 N 279


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492879|gb|AES74082.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  127 bits (320), Expect = 5e-27
 Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 2/246 (0%)
 Frame = +2

Query: 236 HTFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLIET- 412
           +T + P+ +  +VDK   ++K+       Y K+      +   N   P+L  + S I T 
Sbjct: 47  NTNLSPE-DTHIVDKFHTIIKDH------YRKNPNPNAVSPSLNLSIPDLSIEFSKISTV 99

Query: 413 -PVSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCK 589
             VS ++  R I++C+G ++   IP +  +L FF W+   + + + P + +NE++ L  K
Sbjct: 100 YSVSPSITRRAIEKCSGVRHG--IP-FLQSLAFFNWATTLEGFPSSP-EPYNEMIDLAGK 155

Query: 590 YCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVAD 769
              FD+AW + D M +RG  I   +F +L+  YV   L  + V AF RME++G  P    
Sbjct: 156 LRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVS 215

Query: 770 YVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKA 949
           +  ++  LC      +A+ FF+S K K   DV +Y +L+ GW  A D+  A EV +++K 
Sbjct: 216 FSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKE 275

Query: 950 QGLRPN 967
            G++PN
Sbjct: 276 AGVKPN 281


>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  127 bits (319), Expect = 6e-27
 Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 2/238 (0%)
 Frame = +2

Query: 260 EAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLIET--PVSATVA 433
           E  + DKL  L+K         N S  + PS    N+  P+L    S I     +S  + 
Sbjct: 58  ETLIADKLHSLIKG----HHRKNPSPDSNPSPPNPNFTIPSLSLDFSQISAVHSLSPGIV 113

Query: 434 ERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAW 613
            RVI++C G ++   + +   AL FF W+    +    P + +NEL+ L  K  +FD+AW
Sbjct: 114 RRVIEKCGGVRHGIPVLQ---ALAFFNWATAQDRLGQSP-EPYNELVDLAGKVRQFDLAW 169

Query: 614 QVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGIL 793
            V D M  R   I  ++F IL+  YV      + V AF RM+++G  P    +  ++  L
Sbjct: 170 HVLDLMKTRNVEITIETFSILVRRYVRAGFAAEAVHAFNRMDDYGCKPDKIAFSVVISNL 229

Query: 794 CNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           C      +AQ FF+  KDK   DV +Y NL+ GW  A ++  A  V +E+K  G++PN
Sbjct: 230 CKKRRATEAQSFFDGLKDKFEPDVVLYTNLIHGWCRAGNISEAESVFSEMKKAGIKPN 287


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
           gi|482574795|gb|EOA38982.1| hypothetical protein
           CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score =  127 bits (319), Expect = 6e-27
 Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 1/282 (0%)
 Frame = +2

Query: 125 SLKMAMYVRHLLKMPSVSATRSLKNIYPFTSANYNSIHTFVKPDREAELVDKLDDLLKNP 304
           S  +++   H+ K  S SAT  L +     SA  +   +      + +  +KL  ++K+ 
Sbjct: 11  SRTLSLISPHIPKPLSTSATSLLHDHEGDESAVVSVPISPALTPADTQTAEKLHSIIKDH 70

Query: 305 SVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLIETP-VSATVAERVIQRCNGEKNYAII 481
              +   +      PS  L     P+L    S IE   +S +V + VI++C G ++   +
Sbjct: 71  YRKNPTSSNDAVLNPSLTL-----PSLSLDFSQIEASRISPSVVQCVIEKCGGVRHGIPL 125

Query: 482 PRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIEFD 661
            +   +L FF W+    +Y  K    +NE++ L  K  +FD+AW + D M +R   I  +
Sbjct: 126 HQ---SLSFFNWATSRDEYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIE 182

Query: 662 SFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSF 841
           +F ILI  YV   L  + V  F RME++G  P    +  ++ IL       +AQ FF+S 
Sbjct: 183 TFTILIKRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILSRKRRATEAQSFFDSL 242

Query: 842 KDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           KD+   DV +Y NL+RGW  A ++  A  V  E+K  G+ PN
Sbjct: 243 KDRFEPDVIVYTNLVRGWCRAGEISEAERVFKEMKLAGIEPN 284


>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  125 bits (314), Expect = 2e-26
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
 Frame = +2

Query: 227 NSIHTFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLI 406
           NS    V    E  +V+K   L+K+         K+    P +   +Y   +L    S I
Sbjct: 46  NSAVNIVLSSEETLVVEKFHSLIKSHQ------RKNTNPDPISPNPHYTIASLSFDFSQI 99

Query: 407 ETP--VSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSL 580
            +   VS+ +  RVI++C G ++    P+    L FF W+   +++   P + + E++ L
Sbjct: 100 SSADSVSSAIVRRVIEKCGGVRHGIPFPQ---TLAFFNWATNLEEFGHSP-EPYMEMIDL 155

Query: 581 LCKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPT 760
             K  +FD+AWQ+ D M  R   I  ++F IL+  YV   L  + V AF RME++G  P 
Sbjct: 156 AGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPD 215

Query: 761 VADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAE 940
              +  ++  L      I+AQ FF+S KD+   DV +Y +L+ GW  A ++  A  V  E
Sbjct: 216 KIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGE 275

Query: 941 IKAQGLRPN 967
           +K  G++PN
Sbjct: 276 MKMAGIQPN 284


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  124 bits (312), Expect = 4e-26
 Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
 Frame = +2

Query: 227  NSIHTFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLI 406
            NS    V    E  +V+K   L+K+         K+    P +   +Y   +L    S I
Sbjct: 1078 NSAVNIVLSSEETLVVEKFHSLIKSHQ------RKNTNPDPISPNPHYTIASLSFDFSQI 1131

Query: 407  ETP--VSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSL 580
             +   VS+ +  RVI++C G ++    P+    L FF W+   +++   P + + E++ L
Sbjct: 1132 SSADSVSSAIVRRVIEKCGGVRHGIPFPQ---TLAFFNWATNLEEFGHSP-EPYMEMIDL 1187

Query: 581  LCKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPT 760
              K  +FD+AWQ+ D M  R   I  ++F IL+  YV   L  + V AF RME++G  P 
Sbjct: 1188 AGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPD 1247

Query: 761  VADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAE 940
               +  ++  L      I+AQ FF+S KD+   DV +Y +L+ GW  A ++  A  V  E
Sbjct: 1248 KIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGE 1307

Query: 941  IKAQGLRPN 967
            +K  G+ PN
Sbjct: 1308 MKMAGIXPN 1316


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
           gi|550339796|gb|EEE94747.2| hypothetical protein
           POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score =  124 bits (311), Expect = 5e-26
 Identities = 87/280 (31%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
 Frame = +2

Query: 152 HLLKMPSVSATRSLKNIYPFTSANYNSIHTFVKPD-----REAELVDKLDDLLKNPSVIS 316
           HLLK  S S   +  +      +N +  HT   P       E  + +KL  L+K+     
Sbjct: 17  HLLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPLSPEETSVAEKLHSLIKD----- 71

Query: 317 QVYNKSEGTKPSNHLQNYLYPNLVTQLS-LIET--PVSATVAERVIQRCNGEKNYAIIPR 487
              N    T P +    Y  P+L    S  I T   +S ++   VI++  G ++   +P+
Sbjct: 72  HYRNNPNKTLPPD--PTYTIPSLSLDFSQTISTVHSISPSIIRHVIEQSGGVRHGIPVPQ 129

Query: 488 WKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIEFDSF 667
               L FF W+     +   P + FNE++    K   FD+AW V D M  R   I  ++F
Sbjct: 130 ---VLAFFNWASYQDGFDKSP-EAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETF 185

Query: 668 RILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD 847
            IL+  YV   L  + + AF RME++   P    +  L+ ILC      +AQ+FF+S KD
Sbjct: 186 SILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKD 245

Query: 848 KVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           K   DV +Y NL+RGW  A ++  A  V  E+K  G++PN
Sbjct: 246 KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPN 285


>ref|XP_002336862.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score =  123 bits (308), Expect = 1e-25
 Identities = 87/280 (31%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
 Frame = +2

Query: 152 HLLKMPSVSATRSLKNIYPFTSANYNSIHTFVKPD-----REAELVDKLDDLLKNPSVIS 316
           HLLK  S S   +  +      +N +  HT   P       E  + +KL  L+K+     
Sbjct: 17  HLLKPFSSSPLTTSDSNLLEDDSNDDEEHTIKTPKTPLSPEETFVAEKLHSLIKD----- 71

Query: 317 QVYNKSEGTKPSNHLQNYLYPNLVTQLS-LIET--PVSATVAERVIQRCNGEKNYAIIPR 487
              N    T P +    Y  P+L    S  I T   +S ++   VI++  G ++   +P+
Sbjct: 72  HYRNNPNKTLPPD--PTYTIPSLSLDFSQTISTVHSISPSIIRHVIEQSGGVRHGIPVPQ 129

Query: 488 WKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIEFDSF 667
               L FF W+     +   P + FNE++    K   FD+AW V D M  R   I  ++F
Sbjct: 130 ---VLAFFNWASYQDGFDKSP-EAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETF 185

Query: 668 RILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD 847
            IL+  YV   L  + + AF RME++   P    +  L+ ILC      +AQ+FF+S KD
Sbjct: 186 SILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKD 245

Query: 848 KVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           K   DV +Y NL+RGW  A ++  A  V  E+K  G++PN
Sbjct: 246 KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPN 285


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  122 bits (307), Expect = 2e-25
 Identities = 69/186 (37%), Positives = 100/186 (53%)
 Frame = +2

Query: 410 TPVSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCK 589
           +PVS ++   VI++C   ++   IP ++ AL FF W+     ++  P + +NE++ L  K
Sbjct: 99  SPVSPSLVSHVIEKCAAVRHG--IPFFQ-ALSFFNWATSRPGFTHHP-EPYNEMIDLAGK 154

Query: 590 YCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVAD 769
              FD+ WQV D M  R   I  ++F ILI  YV   L  + V AF RME++   P    
Sbjct: 155 VRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIA 214

Query: 770 YVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKA 949
           +  L+ ILC      +AQ FF+S KDK   DV +Y NL+RGW  A ++  A  V  E+K 
Sbjct: 215 FSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKV 274

Query: 950 QGLRPN 967
            G  PN
Sbjct: 275 AGCMPN 280


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Citrus sinensis]
          Length = 538

 Score =  120 bits (302), Expect = 6e-25
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
 Frame = +2

Query: 212 TSANYNSIHTFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVT 391
           T+ N +    F+ P+ E  + +K   L+K+    +   N S  + PS +  ++  P+L  
Sbjct: 45  TNPNSSPDTPFLSPE-ETLISEKFHSLIKDHHRKNP--NPSSNSNPSLN-PDFTIPSLSL 100

Query: 392 QLSLIETP--VSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFN 565
             S I T   +S +    VI++  G ++   IP  +  L FF W     ++   P   ++
Sbjct: 101 GFSQISTAHSISPSTVRHVIEKSCGVRHG--IPLLQ-VLSFFNWVTARPEFVHSPD-LYH 156

Query: 566 ELLSLLCKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEF 745
           E+++L  K  +FD+AW   D M +R   I  D+F IL+  YV   L  + V AF RMEE+
Sbjct: 157 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 216

Query: 746 GYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAY 925
           G +P    +  ++ ILC      +AQ FF+S KDK   DV +Y NL+RGW  A ++  A 
Sbjct: 217 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 276

Query: 926 EVLAEIKAQGLRPN 967
            V  E+K  G++PN
Sbjct: 277 RVFREMKMAGIQPN 290


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
           gi|557537379|gb|ESR48497.1| hypothetical protein
           CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score =  120 bits (302), Expect = 6e-25
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
 Frame = +2

Query: 212 TSANYNSIHTFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVT 391
           T+ N +    F+ P+ E  + +K   L+K+    +   N S  + PS +  ++  P+L  
Sbjct: 48  TNPNSSPDTPFLSPE-ETLISEKFHSLIKDHHRKNP--NPSSNSNPSLN-PDFTIPSLSL 103

Query: 392 QLSLIETP--VSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFN 565
             S I T   +S +    VI++  G ++   IP  +  L FF W     ++   P   ++
Sbjct: 104 GFSQISTAHSISPSTVRHVIEKSCGVRHG--IPLLQ-VLSFFNWVTARPEFVHSPD-LYH 159

Query: 566 ELLSLLCKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEF 745
           E+++L  K  +FD+AW   D M +R   I  D+F IL+  YV   L  + V AF RMEE+
Sbjct: 160 EMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEY 219

Query: 746 GYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAY 925
           G +P    +  ++ ILC      +AQ FF+S KDK   DV +Y NL+RGW  A ++  A 
Sbjct: 220 GCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 279

Query: 926 EVLAEIKAQGLRPN 967
            V  E+K  G++PN
Sbjct: 280 RVFREMKMAGIQPN 293


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cicer arietinum]
          Length = 530

 Score =  119 bits (299), Expect = 1e-24
 Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 5/241 (2%)
 Frame = +2

Query: 260 EAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQ---NYLYPNLVTQLSLIET--PVSA 424
           E+++VDK    +K+       Y+K+    P N L    N   P+L    + I T   +S 
Sbjct: 53  ESQIVDKFHTAIKDH------YSKNPNPNP-NPLPPSLNLSIPDLSIDFTKISTVHSISP 105

Query: 425 TVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFD 604
           ++A RVI++C G ++      +   L FF ++   + + + P + +NE++ L  K   F+
Sbjct: 106 SIARRVIEKCGGVRHGN---PFLQTLAFFNYATTLEGFPSSP-EPYNEMIDLAGKLRHFE 161

Query: 605 IAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELM 784
           +AW + D M +RG  I   +F +L+  YV   L  + V AF RMEE+G +P    +  ++
Sbjct: 162 LAWNLIDLMKSRGVKITVGTFAVLVRRYVRAGLAAEAVHAFNRMEEYGCTPDKVAFSIVI 221

Query: 785 GILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRP 964
             LC      +AQ FF+S K +   DV +Y +L+ GW  A ++  A EV +++K  G++P
Sbjct: 222 SSLCKKRRASEAQLFFDSLKHRFEPDVIVYTSLVHGWCRAGNISKAEEVFSDMKVAGIKP 281

Query: 965 N 967
           N
Sbjct: 282 N 282


>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g20300, mitochondrial; Flags: Precursor
           gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
           to a hypothetical protein T3P18.15 gi|5454201 from
           Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
           multiple PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
           [Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
           At1g20300/F14O10_8 [Arabidopsis thaliana]
           gi|332191838|gb|AEE29959.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  119 bits (299), Expect = 1e-24
 Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 6/227 (2%)
 Frame = +2

Query: 305 SVISQVYNKSEGTKPSNHLQNYLYPNLVTQ-----LSLIETP-VSATVAERVIQRCNGEK 466
           S+I   Y K+  T P++ + N   P+L         S IET  VS +V   VI++C   +
Sbjct: 70  SIIKDHYRKNP-TSPNDAILN---PSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVR 125

Query: 467 NYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGF 646
           +   + +   +L FF W+     Y  K    +NE++ L  K  +FD+AW + D M +R  
Sbjct: 126 HGIPLHQ---SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNV 182

Query: 647 TIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQK 826
            I  ++F ILI  YV   L  + V  F RME++G  P    +  ++  L       +AQ 
Sbjct: 183 EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQS 242

Query: 827 FFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           FF+S KD+   DV +Y NL+RGW  A ++  A +V  E+K  G+ PN
Sbjct: 243 FFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPN 289


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
           gi|449519964|ref|XP_004167004.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  119 bits (297), Expect = 2e-24
 Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
 Frame = +2

Query: 305 SVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLIETP--VSATVAERVIQRCNGEKNYAI 478
           ++I + Y ++ G   +    N+   +L   LS I  P  VS  V   VI++    ++   
Sbjct: 68  ALIKEYYRRNPGPDSTPPCPNFTISSLSNDLSQISAPHSVSPAVVRYVIEKSGAVRHG-- 125

Query: 479 IPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIEF 658
           IP + PAL FF W+   + +   P + +NE++ L  K  +F +AW + D M  R   I  
Sbjct: 126 IP-FLPALAFFNWATAGEGFEHSP-QPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITV 183

Query: 659 DSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNS 838
            +F +L+  YV   L  + V AF RME++G +  +  +  ++ ILC     ++AQ FF++
Sbjct: 184 VTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDN 243

Query: 839 FKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
            K K   DV +Y +L+ GW  A D+  A  V  E+K  G+ PN
Sbjct: 244 LKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPN 286


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336219|gb|EFH66636.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 537

 Score =  119 bits (297), Expect = 2e-24
 Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
 Frame = +2

Query: 305 SVISQVYNKSEGTKPSNHLQN--YLYPNLVTQLSLIETP-VSATVAERVIQRCNGEKNYA 475
           S+I   Y K+  T P++ + N     P L    S I+   +S +V   VI++C   ++  
Sbjct: 70  SIIKDHYRKNP-TNPNDAVLNPSLTLPALSLDFSQIDASRISPSVVRCVIEKCGSVRHGI 128

Query: 476 IIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAWQVFDEMTNRGFTIE 655
            + +   +L FF W+     Y  K    +NE++ L  K  +FD+AW + D M +R   I 
Sbjct: 129 PLHQ---SLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEIS 185

Query: 656 FDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFN 835
            ++F ILI  YV   L  + V  F RME++G  P    +  ++  L       +AQ FF+
Sbjct: 186 IETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFD 245

Query: 836 SFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           S KD+   DV +Y NL+RGW  A ++  A +V  ++K  G+ PN
Sbjct: 246 SLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPN 289


>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum tuberosum]
          Length = 549

 Score =  118 bits (295), Expect = 4e-24
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
 Frame = +2

Query: 239 TFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHL--QNYLYPNLVTQLSLIET 412
           T V  + EA++ +K+  L+K+       + K+    P++     N  +P L    S I  
Sbjct: 63  TEVLSEEEAQIAEKIHSLIKDH------HRKNPTATPTSIPLNPNITFPTLSFDFSSISD 116

Query: 413 --PVSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWS-LQTQQYSAKPTKTFNELLSLL 583
              +S  V  RVI++C   ++   IP +  AL FF W+ ++    S    + +NE++ L 
Sbjct: 117 NRSISPPVVSRVIEKCGSVRHG--IP-FSQALAFFNWAAVRDSCGSFLNPEPYNEMIDLA 173

Query: 584 CKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTV 763
            K  +FD+AW + D M  +   I  ++F ILI  YV   L  + V  F RME++   P  
Sbjct: 174 GKVRQFDVAWHLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDR 233

Query: 764 ADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEI 943
             +  ++GILC      +AQ FF+S KDK   DV +Y +L+ GW  A ++  A  +  ++
Sbjct: 234 NAFSIVIGILCKKRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISEAERIFRDM 293

Query: 944 KAQGLRPN 967
           K  G++PN
Sbjct: 294 KDAGVQPN 301


>gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  118 bits (295), Expect = 4e-24
 Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
 Frame = +2

Query: 260 EAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHLQNYLYPNLVTQLSLIETP--VSATVA 433
           E  L DKL   +K+        N S     +    N   P+L    S +     +S  VA
Sbjct: 53  ETTLADKLHAAIKD----HHRRNPSPNPNAAPPTPNLAIPDLSLDFSALSAAQTLSPAVA 108

Query: 434 ERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQYSAKPTKTFNELLSLLCKYCKFDIAW 613
            RVI++C   ++   IP ++ +L FF W+     +   P + ++E+L L  K   FD+AW
Sbjct: 109 RRVIEKCGAVRHG--IPLFQ-SLAFFNWATSLDGFPPSP-EPYDEMLDLAGKLRHFDLAW 164

Query: 614 QVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTVADYVELMGIL 793
            V D M  RG  I   +F  L+  YV   L  + V AF RME++G +P    +  ++  L
Sbjct: 165 HVIDLMKTRGVEISVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDKVAFSIVISSL 224

Query: 794 CNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEIKAQGLRPN 967
           C      +AQ FF S K K   DV +Y +L+ GW  A ++  A EV +++K  G++PN
Sbjct: 225 CKKRRANEAQSFFESLKHKFEPDVLVYTSLVYGWCRAGNISKAEEVFSDMKMAGIKPN 282


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score =  116 bits (291), Expect = 1e-23
 Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 5/248 (2%)
 Frame = +2

Query: 239 TFVKPDREAELVDKLDDLLKNPSVISQVYNKSEGTKPSNHL--QNYLYPNLVTQLSLIET 412
           T V    EA++ +K   L+K+       + K+    P++     N  +P L    S I  
Sbjct: 57  TEVLSKEEAQIAEKFHSLIKDH------HRKNPTATPTSIPLNPNITFPTLSFDFSSISD 110

Query: 413 --PVSATVAERVIQRCNGEKNYAIIPRWKPALGFFLWSLQTQQY-SAKPTKTFNELLSLL 583
              +S  V  RVI++C   ++   IP +  AL FF W+       S    + +NE++ L 
Sbjct: 111 NRSISPPVVSRVIEKCGSVRHG--IP-FSQALAFFNWAAARDSCGSFLNPEPYNEMIDLA 167

Query: 584 CKYCKFDIAWQVFDEMTNRGFTIEFDSFRILINSYVMDSLPDKGVRAFERMEEFGYSPTV 763
            K  +FD+AW + D M  +   I  ++F ILI  YV   L  + V  F RME++   P  
Sbjct: 168 GKVRQFDVAWHLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDR 227

Query: 764 ADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLSAYEVLAEI 943
             +  ++GILC      +AQ FF+S KDK   DV +Y +L+ GW  A ++  A  +  ++
Sbjct: 228 NAFSVVVGILCKKRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISEAERIFRDM 287

Query: 944 KAQGLRPN 967
           K  G++PN
Sbjct: 288 KDAGVQPN 295