BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021221
         (1574 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006301430.1| hypothetical protein CARUB_v10021848mg [Caps...    47   1e-08
ref|XP_006282290.1| hypothetical protein CARUB_v10028576mg [Caps...    48   3e-07
ref|XP_004301975.1| PREDICTED: putative FBD-associated F-box pro...    42   5e-07
ref|XP_006416831.1| hypothetical protein EUTSA_v10007510mg [Eutr...    42   2e-06
ref|NP_001190368.1| putative FBD-associated F-box protein [Arabi...    43   2e-06
ref|NP_197664.2| putative FBD-associated F-box protein [Arabidop...    43   2e-06
sp|Q9FNI9.2|FBD14_ARATH RecName: Full=Putative FBD-associated F-...    43   2e-06
dbj|BAB11678.1| unnamed protein product [Arabidopsis thaliana]         43   2e-06
ref|XP_006287853.1| hypothetical protein CARUB_v10001079mg [Caps...    42   4e-06
ref|XP_006405748.1| hypothetical protein EUTSA_v10028223mg [Eutr...    41   6e-06

>ref|XP_006301430.1| hypothetical protein CARUB_v10021848mg [Capsella rubella]
           gi|482570140|gb|EOA34328.1| hypothetical protein
           CARUB_v10021848mg [Capsella rubella]
          Length = 434

 Score = 46.6 bits (109), Expect(2) = 1e-08
 Identities = 24/53 (45%), Positives = 31/53 (58%)
 Frame = +2

Query: 269 DFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVDREL 427
           D IS LPDD+L+RILS     Y    V    LSKRW  ++TM P L + D ++
Sbjct: 17  DMISELPDDLLVRILSLVPIKY---AVATMFLSKRWLSVWTMIPTLEYQDYDI 66



 Score = 41.2 bits (95), Expect(2) = 1e-08
 Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 12/173 (6%)
 Frame = +3

Query: 510 HKADVRDFV------LQVNDMSQWNWCLQFVSNYAITHLNLD-----SYKPSMLDEFPFS 656
           HKA V DF+      +   D+    W    VS      L+L+     S  P+   +  +S
Sbjct: 92  HKAPVIDFLCVKLGYICPTDVDVVKWVENAVSRCL---LDLEFKLAWSADPTSFPKSLYS 148

Query: 657 CENIVNMNLSFIECVPRSCHLGFPKLGRCRL-CLFMYNQFWYREFLRNCPVLEFLSFTAP 833
           CE++V + L     V        P L +  L C+   ++     FL  CPVL+ L     
Sbjct: 149 CESLVKLTLCHKILVDVPSTECLPSLRKLSLNCVVYKDESSIVRFLSGCPVLKCLYVKRK 208

Query: 834 FSPQLSPFTFSSPSIDYLDLRIQTSENDESADGTQDEIEIIVEGPRLRKLRLH 992
            +  +  FT   PS+  LD        +E  D   +E  +I++ P L  L ++
Sbjct: 209 MNDNVKKFTIKVPSLLELDY------TNEHLDSYDEEHSLIIDTPGLEDLYIY 255


>ref|XP_006282290.1| hypothetical protein CARUB_v10028576mg [Capsella rubella]
           gi|482550994|gb|EOA15188.1| hypothetical protein
           CARUB_v10028576mg [Capsella rubella]
          Length = 413

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +2

Query: 266 LDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVD 418
           +D IS LPDD LL ILS       K+V+K S+LSKRWR+L+ +   L ++D
Sbjct: 1   MDRISFLPDDFLLHILSLLPT---KDVLKTSVLSKRWRNLWKLVHKLEYID 48



 Score = 35.4 bits (80), Expect(2) = 3e-07
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 7/149 (4%)
 Frame = +3

Query: 462 ERRNLMEKA--ISSAFFRHKADVRDFVLQVNDMSQWNWCLQFVSNYAITHLNLDSY---- 623
           +R  L+ KA  + S  F+     +D      D+  W   ++F     +  LN D      
Sbjct: 63  DRSLLLNKAQVLESLHFKLDRQCKDV-----DIGFW---IRFAVERGLRELNFDYCFTIR 114

Query: 624 KPSMLDEFPFSCENIVNMNLSFIECVPRSCHLGFPKLGRCRLCLFMY-NQFWYREFLRNC 800
           KPS L +  F+C  +V + L  +  V     + F  L    L   ++ +    R+ L  C
Sbjct: 115 KPSRLPQSLFTCVTLVALKLKNVSLVDAQFPVCFKLLKTLHLVEVIFRDDESSRKLLSRC 174

Query: 801 PVLEFLSFTAPFSPQLSPFTFSSPSIDYL 887
           PVLE L         ++ F+   PS+  L
Sbjct: 175 PVLEVLVLERAIHDNVATFSVMLPSLQRL 203


>ref|XP_004301975.1| PREDICTED: putative FBD-associated F-box protein At3g50710-like
           [Fragaria vesca subsp. vesca]
          Length = 457

 Score = 42.0 bits (97), Expect(2) = 5e-07
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
 Frame = +2

Query: 158 SRAYVLGI*DSCFTIVMELEKNGY---EPKKNKYSDFGKLDFISSLPDDMLLRILSYTTC 328
           S +Y+L +  + FTI++ +    +   +      S     D IS LPD  L  ILS+   
Sbjct: 4   STSYILKLVATKFTILLAIRPCVFAAGQMNSKPQSQLRVRDRISDLPDAFLWHILSFLDT 63

Query: 329 NYYKEVVKCSILSKRWRHLYTMSPALHFVDRELIGKP 439
            Y   VV+  ILS RW++++   P L F DR     P
Sbjct: 64  TY---VVRTCILSTRWKNIWAYFPTLDF-DRRCFHDP 96



 Score = 40.4 bits (93), Expect(2) = 5e-07
 Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
 Frame = +3

Query: 501 FFRHKADVRDFVLQVN----DMSQWNWCLQFVSNYAITHLNLDSYKPSMLD--EFPFS-- 656
           FFR+ +++  F L +     D S+ N  +     Y+   L++++  P  L   E P S  
Sbjct: 108 FFRYSSNIVKFRLCLRGLDVDQSRINAWINTAVRYSFVELDINAGYPCQLRTYELPKSLV 167

Query: 657 -CENIVNMNLS--FIECVPRS-CHLGFPKLGRCRLCLFMYNQFWYREFLRNCPVLEFLSF 824
            C+ +V + L+  FI  VP S C   FP L    L  F+       E L NCPVLE  + 
Sbjct: 168 ICKTLVTLKLTSEFITSVPASGC---FPSLKSLHLIFFLNVNVSMFEVLSNCPVLEDFTM 224

Query: 825 TAPFSPQLS-PFTFSSPSIDYLDLRIQT 905
                   S  F  +SP +  L + I T
Sbjct: 225 VGILRYNDSVNFNIASPVLKTLRICIDT 252


>ref|XP_006416831.1| hypothetical protein EUTSA_v10007510mg [Eutrema salsugineum]
            gi|557094602|gb|ESQ35184.1| hypothetical protein
            EUTSA_v10007510mg [Eutrema salsugineum]
          Length = 479

 Score = 41.6 bits (96), Expect(2) = 2e-06
 Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
 Frame = +3

Query: 504  FRHKADVRDFVLQVN-------DMSQWNWCLQFVSNYAITHLNLDSYKPSMLD-EFP--- 650
            F+ K+ +++F   VN       D+  + W +  V    + HL+L        + E P   
Sbjct: 117  FKSKSRIQNFSFSVNWCADVELDVDFFTWLINAVIKRKVKHLDLVGKTWGQDEVEIPRTV 176

Query: 651  FSCENIVNMNLSFIECVPRSCHLGFPKLGRCRLCLFMYNQFWYREFL-RNCPVLEFLSFT 827
            ++CE++V++NL  ++ +P    +  P L    L   +Y+     E L   CPVLE LS T
Sbjct: 177  YTCESLVSLNLRDVD-LPNPERVSLPSLKVMVLDEVVYSDDRAFEMLISGCPVLESLSIT 235

Query: 828  AP--FSPQLSPFTFSSPSIDYLDLRIQTSENDESADGTQDEIEIIVEGPRLRKLRL--HC 995
                +   +  F   S S+      +  +       G+  ++  +++ PRL +LR+  H 
Sbjct: 236  VDYFYGNNVKTFRVCSQSL------LSFTYVGHDLFGSFRKLAAVLDAPRLERLRIDDHR 289

Query: 996  DSSY 1007
             SS+
Sbjct: 290  TSSF 293



 Score = 38.9 bits (89), Expect(2) = 2e-06
 Identities = 26/84 (30%), Positives = 43/84 (51%)
 Frame = +2

Query: 206 MELEKNGYEPKKNKYSDFGKLDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHL 385
           ME +K     KK      G+ D +++LP  +L +IL        K+VVK S+LS+RW+++
Sbjct: 1   MEEKKAKRVRKKRSGYKKGEDDMLTNLPVALLHQILLNLPT---KDVVKSSVLSRRWKNI 57

Query: 386 YTMSPALHFVDRELIGKPHQNMKC 457
           +   P L    R+     +Q  +C
Sbjct: 58  WKYVPGLDLECRDFFVPGYQYCEC 81


>ref|NP_001190368.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|332005684|gb|AED93067.1| putative FBD-associated
           F-box protein [Arabidopsis thaliana]
          Length = 675

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)
 Frame = +2

Query: 251 SDFGKLDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVDRE 424
           S   K D IS LPD ++ +IL Y      K+ V  S+LSKRWR L+  +P L  +  +
Sbjct: 17  SSKAKEDLISQLPDSLITQILFYLQT---KKAVTTSVLSKRWRSLWLSTPGLVLISND 71



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
 Frame = +3

Query: 546 NDMSQWNWCLQFVSNYAITHLNLDSYKPSMLDEFP------FSCENIVNMNLSFIECVPR 707
           ND       + FV+   + HL+++   P+  + F       +SCE+++ + L+ + C+ +
Sbjct: 108 NDQDCVTRWIDFVATPKLKHLDVE-IGPTRCECFEVIPLSLYSCESLLYLRLNHV-CLGK 165

Query: 708 SCHLGFPKLGRCRLCLFMY-NQFWYREFLRNCPVLEFLSFTAPFSPQLSPFTFSSPSIDY 884
              +  P L    L   +Y N+      +  CPVLE LSF +    +++     S ++  
Sbjct: 166 FESVSLPCLKTMSLEQNIYANEADLESLISTCPVLEDLSFVSGAYDKVNVLRVQSQTLTS 225

Query: 885 LDLRIQTSENDESADGTQDEIEIIVEGPRLRKLRLHCD 998
           L++       D       D+ E++++  RL+ L L  D
Sbjct: 226 LNIEGCVEYLD------LDKSEVLIDATRLKYLNLEAD 257


>ref|NP_197664.2| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|332005683|gb|AED93066.1| putative FBD-associated
           F-box protein [Arabidopsis thaliana]
          Length = 642

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)
 Frame = +2

Query: 251 SDFGKLDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVDRE 424
           S   K D IS LPD ++ +IL Y      K+ V  S+LSKRWR L+  +P L  +  +
Sbjct: 17  SSKAKEDLISQLPDSLITQILFYLQT---KKAVTTSVLSKRWRSLWLSTPGLVLISND 71



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
 Frame = +3

Query: 546 NDMSQWNWCLQFVSNYAITHLNLDSYKPSMLDEFP------FSCENIVNMNLSFIECVPR 707
           ND       + FV+   + HL+++   P+  + F       +SCE+++ + L+ + C+ +
Sbjct: 108 NDQDCVTRWIDFVATPKLKHLDVE-IGPTRCECFEVIPLSLYSCESLLYLRLNHV-CLGK 165

Query: 708 SCHLGFPKLGRCRLCLFMY-NQFWYREFLRNCPVLEFLSFTAPFSPQLSPFTFSSPSIDY 884
              +  P L    L   +Y N+      +  CPVLE LSF +    +++     S ++  
Sbjct: 166 FESVSLPCLKTMSLEQNIYANEADLESLISTCPVLEDLSFVSGAYDKVNVLRVQSQTLTS 225

Query: 885 LDLRIQTSENDESADGTQDEIEIIVEGPRLRKLRLHCD 998
           L++       D       D+ E++++  RL+ L L  D
Sbjct: 226 LNIEGCVEYLD------LDKSEVLIDATRLKYLNLEAD 257


>sp|Q9FNI9.2|FBD14_ARATH RecName: Full=Putative FBD-associated F-box protein At5g22720
          Length = 468

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)
 Frame = +2

Query: 251 SDFGKLDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVDRE 424
           S   K D IS LPD ++ +IL Y      K+ V  S+LSKRWR L+  +P L  +  +
Sbjct: 17  SSKAKEDLISQLPDSLITQILFYLQT---KKAVTTSVLSKRWRSLWLSTPGLVLISND 71



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
 Frame = +3

Query: 546 NDMSQWNWCLQFVSNYAITHLNLDSYKPSMLDEFP------FSCENIVNMNLSFIECVPR 707
           ND       + FV+   + HL+++   P+  + F       +SCE+++ + L+ + C+ +
Sbjct: 108 NDQDCVTRWIDFVATPKLKHLDVE-IGPTRCECFEVIPLSLYSCESLLYLRLNHV-CLGK 165

Query: 708 SCHLGFPKLGRCRLCLFMY-NQFWYREFLRNCPVLEFLSFTAPFSPQLSPFTFSSPSIDY 884
              +  P L    L   +Y N+      +  CPVLE LSF +    +++     S ++  
Sbjct: 166 FESVSLPCLKTMSLEQNIYANEADLESLISTCPVLEDLSFVSGAYDKVNVLRVQSQTLTS 225

Query: 885 LDLRIQTSENDESADGTQDEIEIIVEGPRLRKLRLHCD 998
           L++       D       D+ E++++  RL+ L L  D
Sbjct: 226 LNIEGCVEYLD------LDKSEVLIDATRLKYLNLEAD 257


>dbj|BAB11678.1| unnamed protein product [Arabidopsis thaliana]
          Length = 422

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)
 Frame = +2

Query: 251 SDFGKLDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVDRE 424
           S   K D IS LPD ++ +IL Y      K+ V  S+LSKRWR L+  +P L  +  +
Sbjct: 17  SSKAKEDLISQLPDSLITQILFYLQT---KKAVTTSVLSKRWRSLWLSTPGLVLISND 71



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
 Frame = +3

Query: 546 NDMSQWNWCLQFVSNYAITHLNLDSYKPSMLDEFP------FSCENIVNMNLSFIECVPR 707
           ND       + FV+   + HL+++   P+  + F       +SCE+++ + L+ + C+ +
Sbjct: 108 NDQDCVTRWIDFVATPKLKHLDVE-IGPTRCECFEVIPLSLYSCESLLYLRLNHV-CLGK 165

Query: 708 SCHLGFPKLGRCRLCLFMY-NQFWYREFLRNCPVLEFLSFTAPFSPQLSPFTFSSPSIDY 884
              +  P L    L   +Y N+      +  CPVLE LSF +    +++     S ++  
Sbjct: 166 FESVSLPCLKTMSLEQNIYANEADLESLISTCPVLEDLSFVSGAYDKVNVLRVQSQTLTS 225

Query: 885 LDLRIQTSENDESADGTQDEIEIIVEGPRLRKLRLHCD 998
           L++       D       D+ E++++  RL+ L L  D
Sbjct: 226 LNIEGCVEYLD------LDKSEVLIDATRLKYLNLEAD 257


>ref|XP_006287853.1| hypothetical protein CARUB_v10001079mg [Capsella rubella]
           gi|482556559|gb|EOA20751.1| hypothetical protein
           CARUB_v10001079mg [Capsella rubella]
          Length = 412

 Score = 42.4 bits (98), Expect(2) = 4e-06
 Identities = 24/51 (47%), Positives = 30/51 (58%)
 Frame = +2

Query: 266 LDFISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVD 418
           +D IS LPD++L++ILSY      K  V  SILSKRW  L+     L F D
Sbjct: 1   MDRISGLPDEVLVKILSYVPT---KVAVSTSILSKRWEFLWMWLTKLEFGD 48



 Score = 37.0 bits (84), Expect(2) = 4e-06
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
 Frame = +3

Query: 510 HKADVRD-FVLQVNDMSQWNWCLQFVSNYAITHLNLD----SYKPSMLDEFPFSCENIVN 674
           H+A V + F L + D+  W   +  VS+Y I  L +     S K ++L    ++C+++V 
Sbjct: 71  HRAPVLESFGLDLGDIRMW--AVVAVSHY-IRELKISVSHYSDKLNILPSSLYTCKSLVV 127

Query: 675 MNLS--FIECVPRSCHLGFPKLGRCRLCLFMY-NQFWYREFLRNCPVLEFLSFTAPFSPQ 845
           + L+   +  VPR   L  P L    L   +Y  +   +  L NCPVLE+L         
Sbjct: 128 LKLNGGILLDVPRMVCL--PSLRTLELRKLIYAKEGSLQRLLSNCPVLEYLQVALCQLDN 185

Query: 846 LSPFTFSSPSIDYLDLRI 899
           +  FT   PS+  L L I
Sbjct: 186 MGTFTVIVPSLQRLSLFI 203


>ref|XP_006405748.1| hypothetical protein EUTSA_v10028223mg [Eutrema salsugineum]
            gi|557106886|gb|ESQ47201.1| hypothetical protein
            EUTSA_v10028223mg [Eutrema salsugineum]
          Length = 424

 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 24/236 (10%)
 Frame = +3

Query: 567  WCLQFVSNYAIT-HLNLDSYK--PSMLDEFPFSCENIVNMNLSFIECVPRSCHLGFPKLG 737
            W L  VS Y +   ++  +Y+    +L    ++C+++V + L+ +  V     +  P L 
Sbjct: 96   WVLTVVSRYVLELEISYFTYQNEQDILSSSLYTCKSLVTLKLNGMILVDVPRMVCLPCLK 155

Query: 738  RCRL-CLFMYNQFWYREFLRNCPVLEFLSFTAPFSPQLSPFTFSSPSIDYLDLRIQTSEN 914
              RL C+   N+   ++ L NCPVL+ L   +     L  F    PS+     R+     
Sbjct: 156  TLRLECMTYLNEDSLQQLLSNCPVLKDLFVQSRGGNNLRKFIVIVPSLK----RLTFLGG 211

Query: 915  DESADGTQDEIEIIVEGPRLRKLRLHCDSSYFQLK----------------VKVDAPNLD 1046
            D+  D      EI+V+ P L+ L    D +Y+  K                V V  P L+
Sbjct: 212  DDHLD------EIVVKTPSLKYL----DFTYYSFKIHHCLIENMPKLSEAYVNVSFPILE 261

Query: 1047 HICVNSILDDERVPSIQCN----QISWGGVLLKEATWNTGRDFTYLNIEGFPRYKL 1202
             + + SI   +R+  +Q +     +  GG +  +          +LN+  + RY L
Sbjct: 262  RL-IGSITSVKRLTLLQVDYGSEDVYGGGFVFNQ--------LVHLNLRMYQRYSL 308



 Score = 37.7 bits (86), Expect(2) = 6e-06
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +2

Query: 275 ISSLPDDMLLRILSYTTCNYYKEVVKCSILSKRWRHLYTMSPALHFVDRELIGKPH-QNM 451
           IS LP+D+L++ILS+      K  V  SILSK+W  L+   P L +       K   + +
Sbjct: 4   ISELPNDLLIKILSFLPT---KVAVSTSILSKQWEFLWMWLPKLVYTSSCCYSKSEDKRL 60

Query: 452 KC 457
           KC
Sbjct: 61  KC 62