BLASTX nr result

ID: Ephedra26_contig00021204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021204
         (925 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002636800.1| Hypothetical protein CBG23547 [Caenorhabditi...    59   3e-06
emb|CAP39824.2| Protein CBR-CLEC-223 [Caenorhabditis briggsae]         58   6e-06

>ref|XP_002636800.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae]
          Length = 2035

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 3/272 (1%)
 Frame = -2

Query: 918  EIHDSSTIKKAHASENEIHDSATEKQLTSKAESKPHDTTAVEKAESELH---GTTAVERH 748
            E+  SST  +  +S  E+  S+T  + +S     P  +T  E + S       +T  E  
Sbjct: 1384 EVPSSSTTAEPSSSTTELPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPS 1443

Query: 747  NCSVEKQPYLPGNELAVKLPHLAENGLPSFTELELPNGKRVELQNPMALQPPNSDEMLVH 568
            + + E    LP +    + P  +   +PS +    P+    E+ +      P+S    V 
Sbjct: 1444 SSTTE----LPSSSTTAE-PSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVP 1498

Query: 567  NNISENDMELPSSTTMEICPNSIVIEQQNLTENEQQGSITTEMPNSADMEVCTSTAKGMP 388
            ++ +  +   PSS+T E+ P+S    +Q+ +  E   SITT  P+S+  EV +S+    P
Sbjct: 1499 SSSTTAE---PSSSTTEV-PSSSTTAEQSSSTTEVPSSITTAEPSSSTTEVPSSSTTAEP 1554

Query: 387  NSATSCSPGYAALDSKHCNEKRKTSPYFVADVSLSPELQLSHDPQQGIVANVSTSEVVSK 208
            +S+T+  P      S        T+    +  +  P    +  P     A  S+S     
Sbjct: 1555 SSSTTEVPS----SSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVP 1610

Query: 207  QQMLTRGVKRKLSSAKGQNKRRRICGSDFEVP 112
                T       S     +       S  EVP
Sbjct: 1611 SSSTTAEPSSSTSEVPSSSTTAEPSSSTSEVP 1642


>emb|CAP39824.2| Protein CBR-CLEC-223 [Caenorhabditis briggsae]
          Length = 2419

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 7/243 (2%)
 Frame = -2

Query: 918  EIHDSSTIKKAHASENEIHDSATEKQLTSKAESKPHDTTAVEKAES--ELHGTTAVERHN 745
            E+  SST  +  +S  E+  S+T  + +S     P  +T  E + S  E+  ++  E  +
Sbjct: 1127 EVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTSEVPSSSTTAEPSSSTSEVPSSSTTEPSS 1186

Query: 744  CSVEKQPYLPGNELAVKLPHLAENGLPSFTELELPNGKRVELQNPMALQPPNSDEMLVHN 565
             + E    +P +    + P  + + +PS +    P+    E+ +      P+S    V +
Sbjct: 1187 STTE----VPSSSTTAE-PSSSTSEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPS 1241

Query: 564  NI-----SENDMELPSSTTMEICPNSIVIEQQNLTENEQQGSITTEMPNSADMEVCTSTA 400
            +      S +  E+PSS T    P+S   E  + +   +  S TTE+P+S+     +S+ 
Sbjct: 1242 SSTTAEPSSSTTEVPSSRTAAE-PSSSTTEVPSSSTTAESSSSTTEVPSSSTTAEPSSST 1300

Query: 399  KGMPNSATSCSPGYAALDSKHCNEKRKTSPYFVADVSLSPELQLSHDPQQGIVANVSTSE 220
              +P+S+T+  P  +  +    +   + S       S+      S   +   V + ST+E
Sbjct: 1301 TEVPSSSTTAEPSSSTTEVPSSSTTAEPSSPTTVSTSVGTSTVGSSTTESSTVPSTSTTE 1360

Query: 219  VVS 211
            + S
Sbjct: 1361 IPS 1363


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