BLASTX nr result

ID: Ephedra26_contig00021137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021137
         (587 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN409...    98   2e-18
gb|ABR17075.1| unknown [Picea sitchensis]                              97   2e-18
gb|ABR16339.1| unknown [Picea sitchensis]                              88   2e-15

>gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN40931.1| unknown
           [Picea sitchensis]
          Length = 385

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 69/189 (36%), Positives = 96/189 (50%)
 Frame = -2

Query: 586 PVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEITVPVPVGSMSRRTVGFSLPTSNEG 407
           P+CR  LVP D  NPTGTG+G+IEP+   V    E+TV V                  +G
Sbjct: 192 PICRIILVPTDDENPTGTGYGIIEPL--EVTPPDEVTVVV------------------DG 231

Query: 406 SGRPSRQGSVRPSREGSLRGSLQGSRRASEPKVLDRSESPIKEEGPGNSHSNLSRSYSTG 227
           +    R GSV               RR ++      SE     E PG+  +  SRS+STG
Sbjct: 232 TRSSWRNGSV---------------RRDNDIDTTVASEKADSHELPGDQATEFSRSHSTG 276

Query: 226 HSLVRLRKDMGEERSTEWFISTPKGLTPASHKTCTYAIKQAMALHSKSQGYNIGASKFSR 47
           HSLVRLRK+M ++  TEW++ T +GL P  H+ C+   + A++ HS+SQG +   ++   
Sbjct: 277 HSLVRLRKEM-DQSGTEWYVHTAEGLKPGLHRNCS---RNALS-HSRSQGPSTSETR--- 328

Query: 46  FPFFSKQFS 20
            P  SKQ S
Sbjct: 329 -PALSKQTS 336


>gb|ABR17075.1| unknown [Picea sitchensis]
          Length = 466

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 69/169 (40%), Positives = 90/169 (53%)
 Frame = -2

Query: 586 PVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEITVPVPVGSMSRRTVGFSLPTSNEG 407
           PVCRTSLVP D  NPTGT +G+IEP        PEIT P  +  +   T G S       
Sbjct: 189 PVCRTSLVPTDDANPTGTDYGIIEP--------PEITPPDEITVVVDGTRGSS------- 233

Query: 406 SGRPSRQGSVRPSREGSLRGSLQGSRRASEPKVLDRSESPIKEEGPGNSHSNLSRSYSTG 227
                R GS+R       R +   S  ASE   +  S+ P++  G  N      RS+STG
Sbjct: 234 ----RRNGSLR-------RDNAVESPAASE---MADSQEPLRVMGL-NQAKKFRRSHSTG 278

Query: 226 HSLVRLRKDMGEERSTEWFISTPKGLTPASHKTCTYAIKQAMALHSKSQ 80
           HSLVRL KD+ ++ +TEW+IST +GLTP  H+ C+   +     HS+SQ
Sbjct: 279 HSLVRLPKDL-DQSATEWYISTAEGLTPGLHRNCSLTARP----HSRSQ 322


>gb|ABR16339.1| unknown [Picea sitchensis]
          Length = 467

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 74/192 (38%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
 Frame = -2

Query: 586 PVCRTSLVPDDMTNPTGTGFGVIEPVIEPVEDAPEITVPVPVGSMSRRTVGFSLPTSNEG 407
           PVCRTSL P D  NPTGTG+G+IEP        PEIT    V  +             +G
Sbjct: 186 PVCRTSLAPADDGNPTGTGYGIIEP--------PEITPSYEVAVVV------------DG 225

Query: 406 SGRPSRQGSVRPSREGSLRGSLQGSRRASEPKVLDRSESPIK---EEGPGNSHSNLSRSY 236
           +    R GSVR       R ++  +  A  P+  D  ES      +EG         RSY
Sbjct: 226 A----RNGSVR-------RDNIVETPMA--PESADSQESLYVLGFDEG-----KKFRRSY 267

Query: 235 STGHSLVRLRKDMGEERSTEWFISTPKGLTPASHKTCTYAIKQAMALHSKSQGYNIGASK 56
           STGHSLVRLRKDM ++ +TEW+I T +GL P   + C+         HS+SQG +    +
Sbjct: 268 STGHSLVRLRKDM-DQLATEWYICTAEGLKPGLQRNCSLTALS----HSRSQGPSTSEIR 322

Query: 55  FSRFPFFSKQFS 20
               P FSKQ S
Sbjct: 323 ----PGFSKQAS 330


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