BLASTX nr result
ID: Ephedra26_contig00021119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00021119
(2890 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001785468.1| predicted protein [Physcomitrella patens] gi... 682 0.0
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 648 0.0
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao] 645 0.0
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe... 643 0.0
ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Sela... 640 0.0
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [... 638 0.0
ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group] g... 634 0.0
gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indi... 633 0.0
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t... 632 0.0
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 630 0.0
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi... 629 0.0
ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [S... 628 0.0
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 627 0.0
ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutr... 625 0.0
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 624 0.0
gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus... 622 0.0
ref|XP_004957260.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 622 0.0
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr... 622 0.0
ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 620 0.0
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 618 0.0
>ref|XP_001785468.1| predicted protein [Physcomitrella patens] gi|162662910|gb|EDQ49709.1|
predicted protein [Physcomitrella patens]
Length = 869
Score = 682 bits (1759), Expect(2) = 0.0
Identities = 318/467 (68%), Positives = 391/467 (83%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA +VLMVAEKP G+M +R+S +VHEFDG F+G V +KVTSVIGHV
Sbjct: 1 MAPSVLMVAEKPSIALSIANFLSHGRMSSRRSYLEVHEFDGSFRGTSVRFKVTSVIGHVL 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFPP +Q+W+TT+P +LFEAP IK E+NPKA++C+HLQQEARGCDYLVLWLDCDREGE
Sbjct: 61 SIDFPPKYQSWDTTDPFELFEAPTIKNESNPKAHVCKHLQQEARGCDYLVLWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NICFEVM+ V LRK GQ+VFRA+FSA++E+D+ AMN L EPNK+E+L+VDARQEID
Sbjct: 121 NICFEVMESAVPVLRKLPGQQVFRAKFSAISEKDVRVAMNTLGEPNKDESLSVDARQEID 180
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHL+ITTF P+PFW+V+P
Sbjct: 181 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLRITTFVPQPFWVVRP 240
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
+++K G+QL L+WDR ++FD++VA++FQ+LV+++ S V ++ +KE+RK RP GLNTV++
Sbjct: 241 HLSKGGHQLMLEWDRNRLFDREVAMLFQKLVLDAKSVRVADVVKKEDRKTRPHGLNTVDM 300
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSAL MGPHH MQIAERLYTQGY+SYPRTESTAYP++++ L + HP WGDY
Sbjct: 301 LKVASSALNMGPHHTMQIAERLYTQGYLSYPRTESTAYPASYDIREALSIHRNHPIWGDY 360
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
SSL++ G HP K+G DVGDHPPITP RSATESELGGGD+W+LYEY+T+HF+ +VSPDCK
Sbjct: 361 ASSLMSLGPHPPKSGVDVGDHPPITPTRSATESELGGGDSWRLYEYVTRHFLGSVSPDCK 420
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R +I F+AGGEKF GRTV S G+TA+MPWLAV++E+LP S G
Sbjct: 421 YTRTKITFTAGGEKFFASGRTVTSAGFTAVMPWLAVSDESLPLISAG 467
Score = 516 bits (1328), Expect(2) = 0.0
Identities = 254/391 (64%), Positives = 293/391 (74%), Gaps = 5/391 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TS P YLTESELI+LMEK+GIGTDASI VHINNICERNYAQV SGR+L+PT LGITL
Sbjct: 479 QGRTSAPDYLTESELITLMEKHGIGTDASISVHINNICERNYAQVQSGRRLVPTPLGITL 538
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
+RGYQ ID DLCLP+IR FIE QITLIAKG +++RVV+H LQ+F+AKF YF QIE MD
Sbjct: 539 VRGYQVIDVDLCLPDIRAFIEKQITLIAKGQAEYSRVVRHVLQEFAAKFAYFVAQIEIMD 598
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSG+ LSKCGKC RYMKYI++RPSRLYC +CEEVH LPQNG IKLYKE+
Sbjct: 599 TLFEAQFSPLADSGKPLSKCGKCLRYMKYIAMRPSRLYCPSCEEVHALPQNGHIKLYKEI 658
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL----GRGNRSLGMP 767
CPLDN+ELVLF L GPDG++ PFE G + G+ GMP
Sbjct: 659 TCPLDNFELVLFSLAGPDGKSYPLCPYCYNNPPFEGAEKLFGGVGFSKEPGKHVGKGGMP 718
Query: 766 CSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKIST 587
C+ C HPTC +SMI+QGVCACPECDGTLVLDP SAPKWRLDCNKCS LVYLP N++KI+
Sbjct: 719 CTLCPHPTCRNSMIQQGVCACPECDGTLVLDPVSAPKWRLDCNKCSNLVYLPHNAHKIAV 778
Query: 586 TEEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSF-PXXXXX 410
+E C +C S LLEVNFNKN+TPL NGATL+K C+LCDELL+S++ +KHG+SF
Sbjct: 779 CQERCEECGSALLEVNFNKNSTPLSNGATLHKACLLCDELLYSLVEVKHGRSFFSRSGRG 838
Query: 409 XXXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
EDPRMSFRDF
Sbjct: 839 RGRGRGRGRGRRGRGRSRGRGEDPRMSFRDF 869
>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
vesca]
Length = 862
Score = 648 bits (1671), Expect(2) = 0.0
Identities = 311/463 (67%), Positives = 370/463 (79%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP G+M TRK+ TDVHEF+G F+G V +KVTSVIGHVFS DF
Sbjct: 6 VLMVAEKPSIALSIANVLSRGQMSTRKASTDVHEFEGTFRGYHVQFKVTSVIGHVFSLDF 65
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P +QNW T+P+DLF+AP+ K E NPKA+I RHL QEARG LVLWLDCDREGENICF
Sbjct: 66 PETYQNWTVTDPLDLFQAPVRKAEANPKAHIRRHLSQEARGFGNLVLWLDCDREGENICF 125
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV+DC T +KV+RARFS+VTE+DIL AM+ LVEPNK+EALAVDARQEIDLKVG
Sbjct: 126 EVIDCIGHT--NETKRKVYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEIDLKVG 183
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAFTRFQT +FQGKYGNLD+ VISYGPCQTPTLGFCV+R+LQI TFKPE FW V+PYI +
Sbjct: 184 VAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSVRPYILQ 243
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY+L L W+R K+FD DVA+MFQ+LV++ G V + EK+E KGRP+GLNTVNLLKVA
Sbjct: 244 SGYELQLDWERNKLFDVDVAVMFQKLVMDDGIAEVTEISEKQESKGRPSGLNTVNLLKVA 303
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F+ L Q +P WG YV L
Sbjct: 304 SSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFKGTLGAQVNNPVWGSYVQRL 363
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
L+ G+ ++G DVGDHPP+TP+RSATE L G DAW+LYEY+ KHFI TVSPDCKY+R
Sbjct: 364 LSDGYQKPRSGTDVGDHPPVTPLRSATEDML-GNDAWRLYEYVCKHFIGTVSPDCKYVRT 422
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
++EFS GGE FH +G+ V+ G+T+IMPWLAVNE+NLP F+KG
Sbjct: 423 KVEFSIGGEIFHCVGQRVLVKGFTSIMPWLAVNEKNLPQFTKG 465
Score = 508 bits (1308), Expect(2) = 0.0
Identities = 249/389 (64%), Positives = 288/389 (74%), Gaps = 3/389 (0%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP YL+ESELISLMEK GIGTDASI VHINNICERNY QV +GR+L+PT LGITL
Sbjct: 477 EGMTSPPEYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGITL 536
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG DH RVV+H LQQF K+ YF QIE MD
Sbjct: 537 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMD 596
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMK+IS +PSRLYC+TCEEV+ LPQ GTIKLYKEL
Sbjct: 597 ALFEAQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGTIKLYKEL 656
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEM---SLGRGNRSLGMPC 764
CPLDN+EL++ +PGPDG++ PFE I G S G+ + GMPC
Sbjct: 657 TCPLDNFELLICSMPGPDGKSFSLCPYCYNSPPFEGINTLFGAAKSGSSGKLGKGAGMPC 716
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC HS+I QGVCACPEC GTLVLDP SAPKWRL CN C+ LV LPQ +++ISTT
Sbjct: 717 FLCPHPTCRHSLITQGVCACPECTGTLVLDPVSAPKWRLCCNMCNFLVLLPQGAHQISTT 776
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
+ C +C+ST++EV+FNK TPL++GATLY GCILCDELLHS++ MK+GKSF
Sbjct: 777 PDRCPECDSTIIEVDFNKKTTPLEDGATLYSGCILCDELLHSLVEMKYGKSF---FRGSR 833
Query: 403 XXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 834 GRGRGSRRGRGRGRGTGKMVDPKMSFRDF 862
>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
Length = 868
Score = 645 bits (1664), Expect(2) = 0.0
Identities = 308/463 (66%), Positives = 370/463 (79%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP GKM TR+ T+VHEF+G F G +YKVTSVIGHVFS DF
Sbjct: 7 VLMVAEKPSIALSIASVLSHGKMSTRRGSTEVHEFNGTFLGFNAHYKVTSVIGHVFSVDF 66
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P ++Q+W TNP+DLF+A +IK E+NPKA+I RHL QEARGC YLVLWLDCDREGENICF
Sbjct: 67 PASYQDWNVTNPLDLFQASVIKTESNPKAHISRHLSQEARGCGYLVLWLDCDREGENICF 126
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV++CT + + ++V+RARFS+VTE+DI AM+ LVEPN++EALAVDARQEIDLKVG
Sbjct: 127 EVIECTGFHMNEAK-KRVYRARFSSVTEKDISKAMDNLVEPNRHEALAVDARQEIDLKVG 185
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+LQI TFKPE FW ++PYI +
Sbjct: 186 VAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALRPYIIQ 245
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY L L+W R K+FD DVAIMFQ+LV G V ++ EK+E KGRP+GLNTVNLLKVA
Sbjct: 246 NGYDLQLEWKRQKLFDIDVAIMFQKLVTEDGILEVIDVSEKQESKGRPSGLNTVNLLKVA 305
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AMQ+AERLYTQG++SYPRTESTAYP++F+F+ L + + WGDYV L
Sbjct: 306 SSALGFGPQTAMQLAERLYTQGFISYPRTESTAYPASFDFKGTLNVIANNSLWGDYVQRL 365
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
LA+G+H ++G D GDHPPITPM SATE L G DAW LY+Y+ +HFI TVSPDCKY+R+
Sbjct: 366 LAEGYHKPRSGTDAGDHPPITPMHSATEDIL-GKDAWSLYQYVCQHFIGTVSPDCKYVRR 424
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
++EF GGE FH IG+ V + G+T IMPWLA+NE+NLP F+KG
Sbjct: 425 KVEFLVGGEYFHCIGQHVTAQGFTYIMPWLAINEKNLPQFTKG 467
Score = 508 bits (1309), Expect(2) = 0.0
Identities = 244/390 (62%), Positives = 288/390 (73%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP YL+ESELISLME+ IGTDASIPVHINNICERNY QV GR+L+PT LGITL
Sbjct: 479 EGETSPPDYLSESELISLMERNRIGTDASIPVHINNICERNYVQVQGGRKLVPTALGITL 538
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE+QITL+AKG +H+ VV+H LQQF KF YF QIE MD
Sbjct: 539 IRGYQCIDPDLCLPDIRSFIEHQITLVAKGQANHSHVVQHVLQQFKQKFSYFVQQIENMD 598
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR LSKCGKC RYMKYIS +P RL+C TCEEV+ LPQ GTIKLYKEL
Sbjct: 599 ALFEAQFSPLADSGRALSKCGKCLRYMKYISTQPPRLFCGTCEEVYHLPQKGTIKLYKEL 658
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEM---SLGRGNRSLGMPC 764
CPLDN+EL++F +PGP+G++ PFE + G S G+ + GMPC
Sbjct: 659 TCPLDNFELLIFSMPGPEGKSFPLCPYCYNSPPFEGMDTLFGATRIGSSGKLGKGAGMPC 718
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC HS++ QGVCACPEC GTLVLDP SAPKWRL CNKC+CLV LP+ +++I+TT
Sbjct: 719 FLCPHPTCRHSVVAQGVCACPECSGTLVLDPVSAPKWRLYCNKCNCLVLLPEGAHRIATT 778
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
E C +C+ST++EV+FNK TPL++GATL+ GCILCDELLHS + +KHGKSF
Sbjct: 779 RERCAECDSTIIEVDFNKKTTPLEDGATLHTGCILCDELLHSFVEVKHGKSFSRGLGGRG 838
Query: 403 XXXXXXXXXXXXXXXXXXNE-DPRMSFRDF 317
+ DP+MSFRDF
Sbjct: 839 RGRGTRRGGYRGRGRAAGKQVDPKMSFRDF 868
>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
Length = 866
Score = 643 bits (1659), Expect(2) = 0.0
Identities = 310/463 (66%), Positives = 367/463 (79%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
V+MVAEKP G+M TRK+ TDVHEF+G+F G V++KVTSVIGHVFS DF
Sbjct: 6 VIMVAEKPSIALSIASVLSRGQMSTRKASTDVHEFEGMFLGFHVHFKVTSVIGHVFSVDF 65
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P +QNW TT+P+DLF+API K E NPKA+I RHL QEARG LVLWLDCDREGENICF
Sbjct: 66 PEKYQNWTTTDPLDLFQAPIQKTEANPKAHIRRHLSQEARGYGNLVLWLDCDREGENICF 125
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EVMDC T ++++RARFS+VTE+DIL AM+ LVEPNK+EALAVDARQEIDLKVG
Sbjct: 126 EVMDCIGHS--NETRRRIYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEIDLKVG 183
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAFTRFQT +FQGKYGNLDS VISYGPCQTPTLGFCV+R+LQI TFKPE FW V+PYI +
Sbjct: 184 VAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWAVRPYIMQ 243
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY+L L+W+R K+FD DVA+MFQ+LV+ G V + EK+E K RP+GLNTVNLLKVA
Sbjct: 244 KGYELQLEWERNKLFDYDVAVMFQKLVMEDGILEVTEIVEKQESKSRPSGLNTVNLLKVA 303
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F L Q +P WG YV L
Sbjct: 304 SSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSYVQRL 363
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
LA G+ ++G DVGDHPP+TP+RSATE L G DAW+LYEYI HF+ TVSPDCKY+R
Sbjct: 364 LADGYQKPRSGTDVGDHPPVTPLRSATEDML-GNDAWRLYEYICTHFMGTVSPDCKYVRT 422
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
++EFS GGE FH +G V+ G+T+IMPWLAV E+NLP F+KG
Sbjct: 423 KVEFSIGGEFFHCVGHRVLVKGFTSIMPWLAVTEKNLPQFTKG 465
Score = 506 bits (1302), Expect(2) = 0.0
Identities = 249/390 (63%), Positives = 288/390 (73%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP YL+ESELISLMEK GIGTDASI VHINNICERNY QV +GR+L PT LGITL
Sbjct: 477 EGMTSPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVLAGRKLGPTALGITL 536
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG DH RVV+H LQQF K+ YF QIE MD
Sbjct: 537 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMD 596
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMK+IS +PSRLYC+TCEEV+ LPQ G+IKLYKEL
Sbjct: 597 ALFEAQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGSIKLYKEL 656
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSLGRGN---RSLGMPC 764
CPLDN+EL++F +PGPDG++ PFE I G + G + + GMPC
Sbjct: 657 TCPLDNFELLIFSMPGPDGKSFPLCPYCYNSPPFEGIDTLFGAVKSGPSSQLGKGAGMPC 716
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC HS+I QGVCACPEC GTLVLDP SAPKWRL CN C+ LV LP+ +++ISTT
Sbjct: 717 FLCPHPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLCCNMCNFLVLLPEGAHQISTT 776
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
E C +C+ST+LEV+FNK TPL+NG TLY GCILCDELLHS++ MK+GKSF
Sbjct: 777 RERCPECDSTILEVDFNKKTTPLENGETLYTGCILCDELLHSLVEMKYGKSFFKRLGGRG 836
Query: 403 XXXXXXXXXXXXXXXXXXNE-DPRMSFRDF 317
+ DP+MSFRDF
Sbjct: 837 RGRGSRRGGYRGRGRGTGKKVDPKMSFRDF 866
>ref|XP_002966408.1| hypothetical protein SELMODRAFT_168492 [Selaginella moellendorffii]
gi|300165828|gb|EFJ32435.1| hypothetical protein
SELMODRAFT_168492 [Selaginella moellendorffii]
Length = 871
Score = 640 bits (1652), Expect(2) = 0.0
Identities = 298/446 (66%), Positives = 365/446 (81%)
Frame = -3
Query: 2798 GKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDFPPAFQNWETTNPIDLFEAPI 2619
G+M TRKS DVHEFDG F+G + +YKVTSVIGHV+ DFPP +QNWE T+P+DLF AP
Sbjct: 9 GRMSTRKSYLDVHEFDGTFRGFQAHYKVTSVIGHVYGIDFPPKYQNWELTDPLDLFGAPT 68
Query: 2618 IKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFR 2439
+K E NPKA++C+HL+QEARGCD LVLWLDCDREGENICFEVM+ + ++KR+GQ+VFR
Sbjct: 69 LKNEANPKAHVCKHLRQEARGCDSLVLWLDCDREGENICFEVMENALPVMKKRSGQQVFR 128
Query: 2438 ARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDS 2259
ARFSAV+E+D+ AM+ LVEPN+NEALAVDARQEIDLKVGVAFTRFQTR+FQGKYGNLDS
Sbjct: 129 ARFSAVSEKDVKTAMSSLVEPNQNEALAVDARQEIDLKVGVAFTRFQTRFFQGKYGNLDS 188
Query: 2258 SVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKDVA 2079
SVIS+GPCQTPTLGFCVERH QI TF P+PFW + P ++K G+ L L W+R +VF++ A
Sbjct: 189 SVISFGPCQTPTLGFCVERHTQIITFVPKPFWTLHPRLSKGGHSLQLDWERGRVFEQATA 248
Query: 2078 IMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVASSALGMGPHHAMQIAERLYT 1899
++ Q+ V+ SGS V ++ +KEERK RP GLNTVN+LKVAS+ALGMGPHHAMQIAERLY
Sbjct: 249 LVPQKAVLKSGSLKVLDVSQKEERKARPTGLNTVNMLKVASTALGMGPHHAMQIAERLYV 308
Query: 1898 QGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLLAKGFHPSKAGNDVGDHPPI 1719
QGY+SYPRTESTAYP++F+ + +L HP +GDY SL+A G K+G D GDHPPI
Sbjct: 309 QGYISYPRTESTAYPASFDVKESLLPLGNHPVFGDYARSLIAAGVRAPKSGTDAGDHPPI 368
Query: 1718 TPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKRIEFSAGGEKFHLIGRTVIS 1539
TPMRS TESEL GGDAW+LY+YI++HF+ +VSPDCKY R ++ FS GGE F G+ V S
Sbjct: 369 TPMRSGTESEL-GGDAWRLYDYISRHFLGSVSPDCKYKRTKVTFSGGGEVFTCSGKVVTS 427
Query: 1538 PGYTAIMPWLAVNEENLPSFSKGTHL 1461
PG+T MPW+AV +ENLP+F+ G L
Sbjct: 428 PGFTIAMPWMAVTDENLPAFTIGESL 453
Score = 488 bits (1257), Expect(2) = 0.0
Identities = 245/413 (59%), Positives = 290/413 (70%), Gaps = 27/413 (6%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP YLTES+LISLMEK+GIGTDASIPVHINNIC+RNY QV +GR+L+PT LGITL
Sbjct: 462 QGRTSPPDYLTESDLISLMEKHGIGTDASIPVHINNICQRNYVQVQTGRRLVPTALGITL 521
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQ ID DLCLP+IR FIE QITLIAKG +DH VV+++L +F AKF F IEKMD
Sbjct: 522 IRGYQTIDADLCLPDIRSFIEQQITLIAKGQVDHETVVRNSLDKFVAKFKNF---IEKMD 578
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEA FSPLADSGR LSKCGKC RYMKYI++RPSRLYCSTCEEV+ +PQNG+IKLYKEL
Sbjct: 579 ALFEAHFSPLADSGRPLSKCGKCKRYMKYITLRPSRLYCSTCEEVYPVPQNGSIKLYKEL 638
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL-------------- 797
CPLDN+ELVLF L GPDG++ + E +
Sbjct: 639 ACPLDNFELVLFSLGGPDGKSYPLCPYCYNHPLESPARDPSSEATTSSDDQASGTAPGDG 698
Query: 796 ------GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNK 635
GR GMPC+ C H TC HS+++QGVCACPECDGTL+LDP SAPKWRLDCNK
Sbjct: 699 NPNTRRGRAATGAGMPCTMCPHATCRHSVMQQGVCACPECDGTLILDPISAPKWRLDCNK 758
Query: 634 CSCLVYLPQNSYKISTTE-EHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHS 458
CS LVYLP N++K+S +E ++C+DC S LLEV+F+KNNTPL+ G TL+ C++CDELL S
Sbjct: 759 CSFLVYLPANTHKVSRSEHDYCDDCGSALLEVDFHKNNTPLEGGRTLHTACVVCDELLQS 818
Query: 457 MITMKHGKSF------PXXXXXXXXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
++ MKHGKSF ++DPRMSFRDF
Sbjct: 819 LVVMKHGKSFGRSRGRGRGRGRGRGRGRGRGRGGGRGGGRGKHQDPRMSFRDF 871
>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
Length = 894
Score = 638 bits (1646), Expect(2) = 0.0
Identities = 310/468 (66%), Positives = 369/468 (78%), Gaps = 5/468 (1%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRK--SRTDVHEFDGIFKGAKVYYKVTSVIGHVFST 2685
+L VAEKP G M TR+ S T+VHEF+G F+G+ YKVTSVIGHVFS
Sbjct: 32 ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 91
Query: 2684 DFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENI 2505
DFP +Q+W T+P+DLF+API+K E+NPKA+I RHL QEAR C +LVLWLDCDREGENI
Sbjct: 92 DFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENI 151
Query: 2504 CFEVMDCTV---DQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEI 2334
CFEV++CT ++ R+R V+RARFS+VTE+DIL AM+ LVEPN++EA AVDARQEI
Sbjct: 152 CFEVVECTGFHGNEARRR----VYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEI 207
Query: 2333 DLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQ 2154
DLKVGVAFTRFQT YFQGKYGNLDS VISYGPCQTPTLGFCV+R+LQI TFKPE FW +
Sbjct: 208 DLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALH 267
Query: 2153 PYINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVN 1974
PYI GY+L L+W+R K+FD DVA+MFQ LV+ G V ++ EK+E K RP+GLNTVN
Sbjct: 268 PYITHNGYELQLEWERNKLFDLDVAVMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVN 327
Query: 1973 LLKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGD 1794
LLKVASSALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F+S L MQ +P WGD
Sbjct: 328 LLKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGD 387
Query: 1793 YVSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDC 1614
YV LL GFH ++G D GDHPPITPMR+A E L G DAWKLY+Y+ +HFI TVSPDC
Sbjct: 388 YVQKLLDDGFHRPRSGTDAGDHPPITPMRAANEDML-GNDAWKLYQYVCQHFIGTVSPDC 446
Query: 1613 KYMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
KY+R ++EFS GGE F IG+ VI G+T+IMPWLAVNE+NLP F KG
Sbjct: 447 KYVRNKVEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKG 494
Score = 531 bits (1368), Expect(2) = 0.0
Identities = 255/389 (65%), Positives = 293/389 (75%), Gaps = 3/389 (0%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP YL+ESELISLMEK GIGTDASIPVHINNICERN+ QV +GR+L+PT LGI+L
Sbjct: 506 EGETSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRKLVPTALGISL 565
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG +DH+RVV+H LQQF KF+YF QIE MD
Sbjct: 566 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVDHSRVVEHVLQQFKQKFIYFVKQIENMD 625
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR LSKCGKC RYMKYIS +PSR+YC TCEEV+ LPQ GTIKLYKEL
Sbjct: 626 ALFEAQFSPLADSGRALSKCGKCLRYMKYISTQPSRMYCGTCEEVYYLPQKGTIKLYKEL 685
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLG---EMSLGRGNRSLGMPC 764
CPLDN+EL++F L GP+G++ PFE I G S G+ + GMPC
Sbjct: 686 TCPLDNFELLIFSLAGPEGKSFPLCPYCYNSPPFEGIDTLFGATKTSSTGKLGKGAGMPC 745
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTCPHS+I QGVCACPEC GTLVLDP SAPKWRL CN C+CLVYLPQ ++KISTT
Sbjct: 746 FLCPHPTCPHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVYLPQGAHKISTT 805
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
+ C +CEST+LEV+FNK TPL +G+TLY GCILCDELLHS++ MKHGKSF
Sbjct: 806 RDRCPECESTILEVDFNKKTTPLLDGSTLYTGCILCDELLHSLVEMKHGKSFFKRMGSRG 865
Query: 403 XXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
+DP+MSFRDF
Sbjct: 866 RGRGSGRGGFRGRGRGGKWDDPKMSFRDF 894
>ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa
Japonica Group] gi|215695029|dbj|BAG90220.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 866
Score = 634 bits (1635), Expect(2) = 0.0
Identities = 305/467 (65%), Positives = 369/467 (79%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA TVLMVAEKP G+M TRK TDVHEFDG+F+G+ ++KVTSVIGHV
Sbjct: 1 MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVL 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFPPA+QNWE T+P+DLF AP+++ E NPKA+I RHL QEARGC YLVLWLDCDREGE
Sbjct: 61 SVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQEARGCTYLVLWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NIC+EV+DCT + G+++FRA+FS+VTE+DI++AMN LV P+K+EALAVDARQEID
Sbjct: 121 NICYEVIDCTGIP-KSEVGRRIFRAKFSSVTEKDIMDAMNNLVLPSKDEALAVDARQEID 179
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+ QITTFKPE FW ++
Sbjct: 180 LKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKT 239
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
Y+ K G ++ L+WDR K+FD DV +MFQ++V + G V ++ KEE K RP GLNTVNL
Sbjct: 240 YVIKDGNEIQLEWDRKKLFDFDVTVMFQKMVASDGILKVTDISVKEECKARPPGLNTVNL 299
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG+GP AM +AERLYTQG++SYPRTESTAYPS+F+F S L +P W +
Sbjct: 300 LKVASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRSALAALAHNPLWSND 359
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
V +LL GF K G+D GDHPPITPMR ATE L G DAW+LY+YI +HFI TVSPDC+
Sbjct: 360 VRTLLDTGFVKPKQGHDAGDHPPITPMRLATEEAL-GTDAWRLYQYICQHFIGTVSPDCR 418
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R IEF++GGE FH +G V S G+T+IMPWLAV+E N+P++ KG
Sbjct: 419 YTRTSIEFTSGGETFHCVGNRVTSKGFTSIMPWLAVSENNIPAYKKG 465
Score = 508 bits (1309), Expect(2) = 0.0
Identities = 246/390 (63%), Positives = 291/390 (74%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G T+PP YL+ESELISLMEK GIGTDASIPVH+NNICERNY QV+SGR+L+PT LG TL
Sbjct: 477 EGSTTPPDYLSESELISLMEKNGIGTDASIPVHVNNICERNYVQVNSGRRLVPTPLGTTL 536
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITLIAKG+ DH +VV+H LQQF K+ YF +IE MD
Sbjct: 537 IRGYQCIDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQFMKKYSYFVKKIENMD 596
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCEEV+ LPQNG+IKLYKE+
Sbjct: 597 ALFEAQFSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEVYYLPQNGSIKLYKEI 656
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL---GRGNRSLGMPC 764
+CPLD +EL+LF + GPD ++ PFE I G + L G+ + GMPC
Sbjct: 657 ICPLDGFELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALKLDDTGKVGKGAGMPC 716
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC SMI QGVCACPEC GTL+LDP SAPKWRL CN+C+C+V LP ++KISTT
Sbjct: 717 FLCLHPTCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCNCIVLLPHAAHKISTT 776
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKS-FPXXXXXX 407
++ C CEST++EV+FNK TPL +GATL++GCILCDELLHS+I MKHGKS F
Sbjct: 777 DKKCPTCESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGR 836
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
++DP+MSFRDF
Sbjct: 837 GRGRGRGRGSSRGRRGSSRHDDPKMSFRDF 866
>gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indica Group]
Length = 866
Score = 633 bits (1633), Expect(2) = 0.0
Identities = 305/467 (65%), Positives = 369/467 (79%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA TVLMVAEKP G+M TRK TDVHEFDG+F+G+ ++KVTSVIGHV
Sbjct: 1 MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVL 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFPPA+QNWE T+P+DLF AP+++ E NPKA+I RHL QEARGC YLVLWLDCDREGE
Sbjct: 61 SVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQEARGCTYLVLWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NIC+EV+DCT + G+++FRA+FS+VTE+DI++AMN LV P+K+EALAVDARQEID
Sbjct: 121 NICYEVIDCTGIP-KSEVGRRIFRAKFSSVTEKDIMDAMNNLVLPSKDEALAVDARQEID 179
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+ QITTFKPE FW ++
Sbjct: 180 LKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKT 239
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
Y+ K G ++ L+WDR K+FD DV +MFQ++V + G V ++ KEE K RP GLNTVNL
Sbjct: 240 YVIKDGNEIQLEWDRKKLFDFDVTVMFQKMVASYGILKVTDISVKEECKARPPGLNTVNL 299
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG+GP AM +AERLYTQG++SYPRTESTAYPS+F+F S L +P W +
Sbjct: 300 LKVASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRSALAALAHNPLWSND 359
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
V +LL GF K G+D GDHPPITPMR ATE L G DAW+LY+YI +HFI TVSPDC+
Sbjct: 360 VRTLLDTGFVKPKQGHDAGDHPPITPMRLATEEAL-GTDAWRLYQYICQHFIGTVSPDCR 418
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R IEF++GGE FH +G V S G+T+IMPWLAV+E N+P++ KG
Sbjct: 419 YTRTSIEFTSGGETFHCVGNRVTSEGFTSIMPWLAVSENNIPAYKKG 465
Score = 508 bits (1309), Expect(2) = 0.0
Identities = 246/390 (63%), Positives = 291/390 (74%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G T+PP YL+ESELISLMEK GIGTDASIPVH+NNICERNY QV+SGR+L+PT LG TL
Sbjct: 477 EGSTTPPDYLSESELISLMEKNGIGTDASIPVHVNNICERNYVQVNSGRRLVPTPLGTTL 536
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITLIAKG+ DH +VV+H LQQF K+ YF +IE MD
Sbjct: 537 IRGYQCIDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQFMKKYSYFVKKIENMD 596
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCEEV+ LPQNG+IKLYKE+
Sbjct: 597 ALFEAQFSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEVYYLPQNGSIKLYKEI 656
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL---GRGNRSLGMPC 764
+CPLD +EL+LF + GPD ++ PFE I G + L G+ + GMPC
Sbjct: 657 ICPLDGFELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALKLDDTGKVGKGAGMPC 716
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC SMI QGVCACPEC GTL+LDP SAPKWRL CN+C+C+V LP ++KISTT
Sbjct: 717 FLCLHPTCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCNCIVLLPHAAHKISTT 776
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKS-FPXXXXXX 407
++ C CEST++EV+FNK TPL +GATL++GCILCDELLHS+I MKHGKS F
Sbjct: 777 DKKCPTCESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGR 836
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
++DP+MSFRDF
Sbjct: 837 GRGRGRGRGSSRGRRGSSRHDDPKMSFRDF 866
>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 865
Score = 632 bits (1629), Expect(2) = 0.0
Identities = 300/466 (64%), Positives = 367/466 (78%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP G+M TR+ T+VHEFDG+F+G K +Y+VTSVIGHVFS DF
Sbjct: 7 VLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDF 66
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P +QNW T +P DLF+APIIK E+NPKA+ICRHL EARGC Y+VLWLDCDREGENICF
Sbjct: 67 PEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENICF 126
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV++ T + K + +KV+RARFS+VTE+DI AM+ LVEPN++EALAVDARQEIDLKVG
Sbjct: 127 EVIESTGFDM-KDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVG 185
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAF+RFQT YFQGKY NLD VISYGPCQTPTLGFCV+R++ I TFKPE FW ++PYI K
Sbjct: 186 VAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIRK 245
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTVNLLKVA
Sbjct: 246 DGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLLKVA 305
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV L
Sbjct: 306 SSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRL 365
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
L+ GFH K+G D GDHPPITPMR+ATE + GGDAW+LY+Y+ +HF+ TVSP+CKY+R
Sbjct: 366 LSDGFHMPKSGTDAGDHPPITPMRAATE-VMVGGDAWRLYQYVCQHFLGTVSPNCKYIRT 424
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGTHL 1461
++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KG +
Sbjct: 425 KVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERI 470
Score = 489 bits (1259), Expect(2) = 0.0
Identities = 233/390 (59%), Positives = 284/390 (72%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G+T+PP YLTESELISLMEK+GIGTDASI VHINNI ERNY QV SGR+++PT LGITL
Sbjct: 479 EGNTAPPDYLTESELISLMEKHGIGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITL 538
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG DH+ VV+H +QQF KF YF QIE MD
Sbjct: 539 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMD 598
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR LSKCGKC RYMK+I+ P RL+C TCEEV+ LPQ GT+KLYKEL
Sbjct: 599 ALFEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKEL 658
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL----GRGNRSLGMP 767
CPLDN+ELV++ +PGP+G++ PFE I G + GMP
Sbjct: 659 TCPLDNFELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMP 718
Query: 766 CSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKIST 587
CS C HPTC HS+ QGVCACPEC+GTLVLDP S PKW+L+CN CSC+V LP+ +++I+T
Sbjct: 719 CSLCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITT 778
Query: 586 TEEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXX 407
T C +C+S ++E++FNK TPL+NGATL++GC+LCDELL S++ +KHG+SF
Sbjct: 779 TSNRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSF---VRRG 835
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
+ DP+MSFRDF
Sbjct: 836 GRGRGRGRGRGRGGRRGSKSVDPKMSFRDF 865
>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
sinensis]
Length = 867
Score = 630 bits (1624), Expect(2) = 0.0
Identities = 300/462 (64%), Positives = 363/462 (78%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP GK+ TRK+ T+VHEFDG+F G+ Y KVTSV+GHVF DF
Sbjct: 6 VLMVAEKPSIALSIATVLSGGKLYTRKASTEVHEFDGMFLGSHAYIKVTSVVGHVFRLDF 65
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
PPA+Q+W +NP+DLF+AP+ K E+N K +ICRHL QEARGC +LVLWLDCDREGENICF
Sbjct: 66 PPAYQDWNASNPLDLFQAPVHKAESNRKVHICRHLNQEARGCGHLVLWLDCDREGENICF 125
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV++CT Q+ +KV RARFS+VTE+DIL AM LVEPN+NEALAVDARQEIDLKVG
Sbjct: 126 EVIECTGFQVNDAR-RKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQEIDLKVG 184
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAFTRFQT YFQGKYGNLDS ISYGPCQTPTLGFCV+R+LQIT+FKPE FW + PY+ +
Sbjct: 185 VAFTRFQTTYFQGKYGNLDSRFISYGPCQTPTLGFCVQRYLQITSFKPEKFWTLHPYLVQ 244
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY+L L+W+R K+FD DVA MFQ+LV+ V ++ EK+E K RP+GLNTVNLLKVA
Sbjct: 245 NGYELKLEWERQKLFDFDVATMFQKLVMQDRILEVIDISEKQESKVRPSGLNTVNLLKVA 304
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F L +P WGDYV L
Sbjct: 305 SSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLSALANNPVWGDYVERL 364
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
LA+G+ ++G D GDHPPITPMRSATE L G DAW+LY Y+ +HF+ TVSPDCKY+R
Sbjct: 365 LAEGYAKPRSGTDAGDHPPITPMRSATEDML-GKDAWRLYSYVCQHFLGTVSPDCKYIRT 423
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSK 1473
+++FS G E FH +G+ V G+T IMPWLA+NE+ +P F+K
Sbjct: 424 KVKFSMGAEFFHCVGQHVTVQGFTYIMPWLAINEKKIPQFTK 465
Score = 504 bits (1299), Expect(2) = 0.0
Identities = 244/390 (62%), Positives = 289/390 (74%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G+T PP YL+ESELI+LMEK GIGTDASIPVHINNICERNY QV +GR+L PT LGITL
Sbjct: 478 EGNTVPPEYLSESELITLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLAPTTLGITL 537
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG DH+ VV+H LQQF K+ YF QIE MD
Sbjct: 538 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSGVVQHVLQQFRQKYSYFVKQIENMD 597
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPL++SGR+LSKCGKC RYMKYIS++PSRLYCSTCE+V+ LPQ GT+KLYKEL
Sbjct: 598 ALFEAQFSPLSNSGRVLSKCGKCLRYMKYISMQPSRLYCSTCEDVYNLPQRGTLKLYKEL 657
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEM---SLGRGNRSLGMPC 764
CPLDN+EL++F + GP+G++ PFE I G S G+ + GMPC
Sbjct: 658 TCPLDNFELLIFSMAGPEGKSFPLCPFCYNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPC 717
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HP C HSMI QGVCACPEC+GTLVLDP SAPKWRL CN C+CLV LPQ +++I+TT
Sbjct: 718 FLCPHPACRHSMIAQGVCACPECNGTLVLDPVSAPKWRLYCNMCNCLVSLPQGAHRIATT 777
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSF-PXXXXXX 407
+E C +C S ++E++FNK TPLD+GATL+ GCILCDELLHS+I +KHGKSF
Sbjct: 778 QEQCPECGSKIIEIDFNKKTTPLDDGATLHTGCILCDELLHSLIEVKHGKSFFKRLGGRG 837
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 838 RGRGAGRGAFKGRGWGTGKGVDPKMSFRDF 867
>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327049|gb|EFH57469.1| DNA topoisomerase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 629 bits (1623), Expect(2) = 0.0
Identities = 300/469 (63%), Positives = 368/469 (78%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP G+M TR+ T+VHEFDG+F+G K +Y+VTSVIGHVFS DF
Sbjct: 7 VLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDF 66
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P +QNW T +P DLF+API+K E+NPKA+ICRHL EARGC Y+VLWLDCDREGENICF
Sbjct: 67 PEKYQNWATIDPQDLFDAPILKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENICF 126
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV++ T + K + +KV+RARFS+VTE+DI AM+ LVEPN++EALAVDARQEIDLKVG
Sbjct: 127 EVIESTGFDM-KDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVG 185
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAF+RFQT YFQGKY NLD VISYGPCQTPTLGFCV+R++ I TFKPE FW ++PYI K
Sbjct: 186 VAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIIK 245
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY+L L+W+R ++FD + A +FQ+LV+ + V ++ EK+E KGRPAGLNTV+LLKVA
Sbjct: 246 DGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVSLLKVA 305
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR Q +P WG YV L
Sbjct: 306 SSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRL 365
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
L+ GFH K+G D GDHPPITPMR+ATE + GGDAW+LY+Y+ +HFI TVSP+CKY+R
Sbjct: 366 LSDGFHKPKSGTDAGDHPPITPMRAATE-VMVGGDAWRLYQYVCQHFIGTVSPNCKYIRT 424
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKGTHLTSI 1452
++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF KG + I
Sbjct: 425 KVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVI 473
Score = 492 bits (1266), Expect(2) = 0.0
Identities = 235/390 (60%), Positives = 284/390 (72%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G+T+PP YLTESELISLMEK+GIGTDASIPVHINNI ERNY QV +GR+L+PT LGITL
Sbjct: 479 EGNTAPPDYLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTALGITL 538
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG DH+ VV+H +QQF KF YF QIE MD
Sbjct: 539 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMD 598
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR LSKCGKC RYMK+I+ P RL+C TCEEV+ LPQ GTIKLYKEL
Sbjct: 599 ALFEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTIKLYKEL 658
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL----GRGNRSLGMP 767
CPLDN+ELV++ +PGP+G++ PFE I G + GMP
Sbjct: 659 TCPLDNFELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGSGMP 718
Query: 766 CSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKIST 587
CS C HPTC HS+ QGVCACPEC+GTLVLDP S PKW+L+CN CSC+V LP+ +++I+T
Sbjct: 719 CSLCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRIAT 778
Query: 586 TEEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXX 407
T C +C+S ++E++FNK TPL+NGATL++GC+LCDELL S++ +KHG+SF
Sbjct: 779 TSNRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSF---VRRG 835
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 836 GRGRGRGRGRGRGGRRGSKAVDPKMSFRDF 865
>ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [Sorghum bicolor]
gi|241923856|gb|EER97000.1| hypothetical protein
SORBIDRAFT_02g029000 [Sorghum bicolor]
Length = 866
Score = 628 bits (1619), Expect(2) = 0.0
Identities = 304/467 (65%), Positives = 368/467 (78%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA VLMVAEKP G+M TRK TDVHEFDG F+G+ +KVTSVIGHV
Sbjct: 1 MAPKVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGTFQGSYANFKVTSVIGHVL 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFPPA+QNWE T+P+DLFEAP+++ E NPKA+I RHL QEARGC YL+LWLDCDREGE
Sbjct: 61 SVDFPPAYQNWEATDPLDLFEAPVLRSECNPKAHIRRHLAQEARGCTYLILWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NIC+EV++CT G+++FRARFS+VTE+DIL AM+ LV PNK+EAL+VDARQEID
Sbjct: 121 NICYEVIECTGIP---DNGRRIFRARFSSVTEKDILTAMDNLVLPNKDEALSVDARQEID 177
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+ QITTFKPE FW ++
Sbjct: 178 LKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKT 237
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
YI K ++ L+WDR K+FD DV +MFQ++VI+ GS V ++ KEE K RP+GLNTVN+
Sbjct: 238 YIIKDSDEIQLEWDRKKLFDFDVTVMFQKMVISDGSLKVADVSVKEECKTRPSGLNTVNM 297
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG+GP AM +AERLYTQG++SYPRTESTAYPS+F+F L +P W +
Sbjct: 298 LKVASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRGALAALLNNPLWSND 357
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
V +LL GF + G+D GDHPPITPMRSATE+ L G DAW+LY+YI +HFI TVSPDC+
Sbjct: 358 VRTLLDAGFVKPRQGHDAGDHPPITPMRSATEAAL-GTDAWRLYQYICQHFIGTVSPDCR 416
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R IEF++GGE FH +G V S G+T+IMPWLA++E +LP+F KG
Sbjct: 417 YTRTAIEFTSGGETFHCVGYRVTSKGFTSIMPWLAISENSLPAFKKG 463
Score = 505 bits (1300), Expect(2) = 0.0
Identities = 243/392 (61%), Positives = 288/392 (73%), Gaps = 6/392 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G T+PP YLTESELISLMEK GIGTDASIPVHINNICERNY QV+SGR+L+PT LG TL
Sbjct: 475 EGSTTPPDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVNSGRRLVPTPLGTTL 534
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITLIAKG DH RV++H +QQF K+ YF +IE MD
Sbjct: 535 IRGYQCIDADLCLPDIRSFIEQQITLIAKGKADHLRVIQHVIQQFMKKYSYFVKKIENMD 594
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCE+V+ LPQNG+IKLYKE+
Sbjct: 595 ALFEAQFSPLADSGRLLSKCGKCGRYMKYISTQPMRLYCITCEDVYYLPQNGSIKLYKEI 654
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL---GRGNRSLGMPC 764
+CPLD +EL+LF + GPD ++ PFE I G + L G+ + GMPC
Sbjct: 655 ICPLDGFELLLFSMVGPDAKSFPLCPFCYNCPPFEGIDKLFGALKLDDTGKVGKGAGMPC 714
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC SMI QGVCACPEC GTL+LDP SAPKWRL CN C+C+V LP +++I+TT
Sbjct: 715 FLCPHPTCKQSMITQGVCACPECSGTLILDPVSAPKWRLYCNMCNCIVLLPHAAHRITTT 774
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSF---PXXXX 413
++ C CEST++EV+FNK TPL +GATL++GCILCD+LLHS+I MKHGKSF
Sbjct: 775 DKKCLTCESTIIEVDFNKKTTPLQDGATLHEGCILCDDLLHSLIEMKHGKSFFMRRGRGR 834
Query: 412 XXXXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
+DP+MSFRDF
Sbjct: 835 GRGRGRGRGSSRGRGRLGNSRYDDPKMSFRDF 866
>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 867
Score = 627 bits (1618), Expect(2) = 0.0
Identities = 306/467 (65%), Positives = 365/467 (78%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
+A TVLMVAEKP G+M TRK T+VHEFDG F G YYKVTSVIGHVF
Sbjct: 2 VAPTVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVF 61
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DF FQ+W++T+P+DLF+A +IK E+NPKA+IC+HL +EARGCD LVLWLDCDREGE
Sbjct: 62 SIDFQAGFQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGE 121
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NICFEV++CT T +KV+RARFS+VTE+DIL A++ LVEPN+NEALAVDARQEID
Sbjct: 122 NICFEVIECTGFG-GNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQT +FQGKYGNLDS +ISYGPCQTPTLGFCV+RHLQITTFKPE FW V P
Sbjct: 181 LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
YI + GY+L L W+R K+FD DV MFQ+ VI G V + EK+E K RP+GLNTVNL
Sbjct: 241 YILQTGYELNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNL 300
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG GP AMQ+AERLYTQG++SYPRTESTAYPS+F+F+ L ++PEWGDY
Sbjct: 301 LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDY 360
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
V LL+ G+ ++G DVGDHPPITPM ATE L G DAW+LY+Y+ +HFI ++S DCK
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMCLATEDML-GRDAWRLYQYVCQHFIGSLSSDCK 419
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y+R +I+FS GE F+ G V G+T+IMPWLAVNE+ LP F KG
Sbjct: 420 YIRTKIQFSIAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKG 466
Score = 506 bits (1302), Expect(2) = 0.0
Identities = 241/390 (61%), Positives = 290/390 (74%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G+T+PP YL+ESELISLMEK+GIGTDASIPVHINNI ERNY QV +GR+L+PT LGITL
Sbjct: 478 QGNTTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITL 537
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE+QITL+AKG DH+ VV+ LQQF K+ YF +I+ MD
Sbjct: 538 IRGYQCIDPDLCLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMD 597
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR LSKCGKC RYMK+IS +P RLYC CEEV+ LPQ GTIKLYKEL
Sbjct: 598 ALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKEL 657
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLG----EMSLGRGNRSLGMP 767
CPLDN+EL+++ LPGP+G++ PFE I G S G ++ +GMP
Sbjct: 658 TCPLDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMGMP 717
Query: 766 CSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKIST 587
C C HPTC HS+I QGVCACPEC GTLVLDP SAP W+L+CNKC+CLV+LP+ +++IST
Sbjct: 718 CFMCPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRIST 777
Query: 586 TEEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXX 407
T + C DC+ST++EV+FNK TPL++GATL+ GCILCDE LHS++ MKHGKSF
Sbjct: 778 TRDKCADCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSR 837
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 838 GRGRGRGRGRGGRGRSSGKPMDPKMSFRDF 867
>ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutrema salsugineum]
gi|557111505|gb|ESQ51789.1| hypothetical protein
EUTSA_v10016222mg [Eutrema salsugineum]
Length = 879
Score = 625 bits (1612), Expect(2) = 0.0
Identities = 300/477 (62%), Positives = 369/477 (77%), Gaps = 14/477 (2%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP G+M TR+ T+VHEFDG+F+G K +Y+VTSVIGHVFS DF
Sbjct: 7 VLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDF 66
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPK--------------ANICRHLQQEARGCDYLV 2541
P +QNW T +P DLF+API+K E+NPK A+ICRHL EARGC Y+V
Sbjct: 67 PEKYQNWATIDPQDLFDAPILKKESNPKLVVDMHLYSVFKCQAHICRHLSNEARGCSYMV 126
Query: 2540 LWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEA 2361
LWLDCDREGENICFEVM+CT + K + +KV+RARFS+VTE+DI AM+ LVEPN++EA
Sbjct: 127 LWLDCDREGENICFEVMECTGFDM-KDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEA 185
Query: 2360 LAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTF 2181
LAVDARQEIDLKVGV F+RFQT YFQGKY +LD VISYGPCQTPTLGFCV+R++QI TF
Sbjct: 186 LAVDARQEIDLKVGVTFSRFQTSYFQGKYQSLDCRVISYGPCQTPTLGFCVQRYMQINTF 245
Query: 2180 KPEPFWIVQPYINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKG 2001
KPE FW ++P++ K GY+L L+WDR ++FD + AI+FQ+LV+ + V ++ EK+E KG
Sbjct: 246 KPEKFWSLRPHLIKDGYELQLEWDRRRLFDLEAAIVFQKLVVEGRTAKVIDVSEKQEVKG 305
Query: 2000 RPAGLNTVNLLKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRM 1821
RPAGLNTVNLLKVASSALG GP AM +AERLYTQG++SYPRTESTAYPS+F+F LR
Sbjct: 306 RPAGLNTVNLLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRA 365
Query: 1820 QCRHPEWGDYVSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKH 1641
Q +P WG +V LL+ GFH K+G D GDHPPITPMR+ATE+ + GGDAW+LY+Y+ +H
Sbjct: 366 QVSNPVWGGFVQRLLSDGFHKPKSGTDAGDHPPITPMRAATEA-MVGGDAWRLYQYVCQH 424
Query: 1640 FIATVSPDCKYMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
FI TVSP+CKYMR ++E S GGE FH G+ V G+TAIMPW AV+E+ LPSF +G
Sbjct: 425 FIGTVSPNCKYMRTKVEMSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFIRG 481
Score = 490 bits (1261), Expect(2) = 0.0
Identities = 233/390 (59%), Positives = 284/390 (72%), Gaps = 4/390 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G+T+PP +LTESELISLMEK+GIGTDASIPVHINNI ERNY QV SGR+L+PT LGITL
Sbjct: 493 EGNTAPPDFLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQSGRKLVPTALGITL 552
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITL+AKG DH+ VV+H +QQF KF YF QIE MD
Sbjct: 553 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMD 612
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR LSKCGKC RYMK+I+ P RL+C TCEEV+ LPQ GT+KLYKEL
Sbjct: 613 ALFEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKEL 672
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL----GRGNRSLGMP 767
CPLDN+ELV++ +PG +G++ PFE + G + GMP
Sbjct: 673 TCPLDNFELVIYSVPGSEGKSFPLCPYCYNSPPFEGMDTLFGATKTPNISAKNKTGSGMP 732
Query: 766 CSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKIST 587
CS C HPTC HS+ QGVCACPEC+GTLVLDP S PKW+L+CN CSC+V LP+ +++I+T
Sbjct: 733 CSLCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRIAT 792
Query: 586 TEEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXX 407
T C +C+S ++E++FNK NTPL+NGATL++GC+LCDELL S++ +KHG+SF
Sbjct: 793 TSNRCPECDSAIIEIDFNKKNTPLENGATLHQGCVLCDELLLSLVEVKHGRSF---VRRG 849
Query: 406 XXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 850 GRGRGRGRGRGRGGRRGSKGVDPKMSFRDF 879
>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
Length = 863
Score = 624 bits (1608), Expect(2) = 0.0
Identities = 297/463 (64%), Positives = 359/463 (77%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP +M TR+ T+VHEFDG F G+ +++VTSVIGHVFS DF
Sbjct: 8 VLMVAEKPSIALSIASVLSHAQMFTRRGSTEVHEFDGKFLGSPAHFRVTSVIGHVFSVDF 67
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P +Q+W T+P+DLF+A +IK E+NPKA+ICRHL QEARGC YLVLWLDCDREGENICF
Sbjct: 68 PGKYQDWAATDPLDLFQAQVIKNESNPKAHICRHLSQEARGCRYLVLWLDCDREGENICF 127
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV+ T + +RARFS+VTE+D++ A++ LV PN++EALAVDARQEIDLKVG
Sbjct: 128 EVIKSTGFHIND-----TYRARFSSVTEKDVVKALDNLVRPNRDEALAVDARQEIDLKVG 182
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAFTRFQT YFQGKYGNLDS VISYGPCQTPTLGFCV+R+LQI TFKPE FW + PYI +
Sbjct: 183 VAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYIIQ 242
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY++ L+W R K+FD +VA+MFQ+LV G V + EK+E K RP GLNTVNLLKVA
Sbjct: 243 NGYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKVA 302
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AMQ+AERLYTQG++SYPRTESTAYP +F+F L Q +P WG+YV L
Sbjct: 303 SSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVQGL 362
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
L G+ + G DVGDHPPITPMRSA E L G DAWKLY+YI +HFI TVSPDCKY+R+
Sbjct: 363 LTNGYQKPRLGTDVGDHPPITPMRSAAEDML-GNDAWKLYQYICQHFIGTVSPDCKYIRR 421
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
++EFS GGE FH G+ V++ G+TAIMPWLA+N++N+PSF KG
Sbjct: 422 KVEFSIGGESFHCTGQHVVTKGFTAIMPWLAINDKNIPSFIKG 464
Score = 499 bits (1286), Expect(2) = 0.0
Identities = 238/389 (61%), Positives = 288/389 (74%), Gaps = 3/389 (0%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP +LTESELISLMEK GIGTDASIPVHINNICERNY QV +GR+L+PT LGITL
Sbjct: 476 EGSTSPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITL 535
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
+RGYQ ID DLCLP+IR FIE QITLIAKG +DH VV+H +QQF+ KF YF +IE MD
Sbjct: 536 VRGYQTIDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMD 595
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFS L DSGR+LSKCGKC RYMK+IS +PSRLYC TCEEV+ LPQ GTIKLYKEL
Sbjct: 596 ALFEAQFSTLTDSGRILSKCGKCLRYMKFISTQPSRLYCGTCEEVYYLPQKGTIKLYKEL 655
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSLGRG---NRSLGMPC 764
CPLDN+EL++ +PGPDG++ PFE I + G + GMPC
Sbjct: 656 SCPLDNFELLICSMPGPDGKSFPLCPYCYINPPFEGIETLINTAKTGTSGKIGKGAGMPC 715
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
+ C HPTCP+S++ QGVCACPEC GTLVLDP SAP+W+L CN C+CLV+L Q +++ISTT
Sbjct: 716 NLCPHPTCPNSLVSQGVCACPECSGTLVLDPVSAPRWKLCCNMCNCLVFLAQGAHRISTT 775
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
++ C +C+S+++EV+FNK TPL++GATL+ GCILCDELLHS++ MKHG+SF
Sbjct: 776 KDRCPECDSSIIEVDFNKKTTPLEDGATLHHGCILCDELLHSLVEMKHGRSF-RHMSSRG 834
Query: 403 XXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 835 RGRGARKGGRGRGRGGGKMMDPKMSFRDF 863
>gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus vulgaris]
Length = 862
Score = 622 bits (1604), Expect(2) = 0.0
Identities = 297/463 (64%), Positives = 359/463 (77%)
Frame = -3
Query: 2858 VLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDF 2679
VLMVAEKP + TR+ T+VHEFDG F G+ Y+KVTSVIGHVFS DF
Sbjct: 8 VLMVAEKPSIALSIASVLSRNQAFTRRGSTEVHEFDGKFLGSPAYFKVTSVIGHVFSVDF 67
Query: 2678 PPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGENICF 2499
P +Q+W T+P+DLF++ ++K E+NPKA+ICRHL QEARGC YLVLWLDCDREGENICF
Sbjct: 68 PAKYQDWAATDPLDLFQSQVLKNESNPKAHICRHLSQEARGCRYLVLWLDCDREGENICF 127
Query: 2498 EVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVG 2319
EV+ CT + +RARFS+VTE+D++ A++ LV+PNK+EALAVDARQEIDLKVG
Sbjct: 128 EVIQCTGFKTND-----TYRARFSSVTEKDVVKALDNLVKPNKDEALAVDARQEIDLKVG 182
Query: 2318 VAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINK 2139
VAFTRFQT YFQGKYGNLDS VISYGPCQTPTLGFCV+R+LQI TFK E FW + PYI +
Sbjct: 183 VAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKSEKFWSLHPYIIQ 242
Query: 2138 IGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVA 1959
GY++ L+W R K+FD +VA+MFQ+LV G V + EK+E K RP GLNTVNLLKVA
Sbjct: 243 SGYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKVA 302
Query: 1958 SSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSL 1779
SSALG GP AMQ+AERLYTQG++SYPRTESTAYP +F+F L Q +P WG+YV L
Sbjct: 303 SSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFLGVLSAQKNNPTWGNYVQGL 362
Query: 1778 LAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRK 1599
L G+ + G DVGDHPPITPMRSA E L G DAWKLY+YI +HFI TVSPDCKY+R+
Sbjct: 363 LTAGYQKPRLGTDVGDHPPITPMRSAAEDML-GNDAWKLYQYICQHFIGTVSPDCKYIRR 421
Query: 1598 RIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
++EFS GGE FH G+ V++ G+TAIMPWLA+N++N+PSF KG
Sbjct: 422 KVEFSIGGESFHCTGQHVVTKGFTAIMPWLALNDKNIPSFVKG 464
Score = 499 bits (1284), Expect(2) = 0.0
Identities = 241/389 (61%), Positives = 289/389 (74%), Gaps = 3/389 (0%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G TSPP YLTESELISLMEK GIGTDASIPVHINNICERNY QV +GR+L+PT LGITL
Sbjct: 476 EGITSPPDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTPLGITL 535
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
+RGYQ ID DLCLP+IR FIE QITLIAKG +DH VV+H +QQF+ KF YF +IE MD
Sbjct: 536 VRGYQTIDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMD 595
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFS L +SGR+LSKCGKC RYMKYIS +P RLYC TCEEV+ LPQ G IKLYKEL
Sbjct: 596 ALFEAQFSTLTESGRILSKCGKCLRYMKYISTQPPRLYCGTCEEVYYLPQKGIIKLYKEL 655
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIG---NQLGEMSLGRGNRSLGMPC 764
CPLDN+EL++ +PGPDG++ PFE I N S G+ + GMPC
Sbjct: 656 SCPLDNFELLICSMPGPDGKSFPLCPYCYSNPPFEGIEALINTTKTGSAGKIGKGSGMPC 715
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
S C HP+CP+S++ QGVCACPEC GTLVLDP SAP+WRL CN C+CLV+L Q +++ISTT
Sbjct: 716 SLCPHPSCPNSLVSQGVCACPECSGTLVLDPISAPRWRLCCNMCNCLVFLAQGAHRISTT 775
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
+E C +C+S+++EV+FNK TPL++GATL++GCILCDELLHS++ MKHG+SF
Sbjct: 776 KERCPECDSSIIEVDFNKKTTPLEDGATLHRGCILCDELLHSLVEMKHGRSF--RHMGSR 833
Query: 403 XXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 834 GRGRGRKGGRGRGRGGGKMMDPKMSFRDF 862
>ref|XP_004957260.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Setaria italica]
Length = 868
Score = 622 bits (1604), Expect(2) = 0.0
Identities = 297/467 (63%), Positives = 369/467 (79%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA VLMVAEKP G+M TRK TD+HEFDG+F+G+ +KVTSVIGHV
Sbjct: 1 MAPKVLMVAEKPSIALSIASALSGGRMSTRKGSTDIHEFDGMFQGSYANFKVTSVIGHVL 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFPPA+QNW+ T+P+DLFEAP+++ E NPKA+I RHL QE RGC YL+LWLDCDREGE
Sbjct: 61 SVDFPPAYQNWDGTDPMDLFEAPVLRSECNPKAHIRRHLAQEVRGCTYLILWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NIC+EV++CT G+++FRARFS+VTE+DIL+AM+ LV PNK+EAL+VDARQEID
Sbjct: 121 NICYEVIECTGIP-ENEAGRRIFRARFSSVTEKDILSAMDNLVLPNKDEALSVDARQEID 179
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+ QITTFKPE FW ++
Sbjct: 180 LKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKT 239
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
YI K G ++ L+WDR K+FD DV +MFQ++V + G+ + ++ KEE K RP+GLNTVN+
Sbjct: 240 YIIKNGDEIQLEWDRKKLFDFDVTVMFQKMVASDGTLKIADVSVKEECKTRPSGLNTVNM 299
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG+GP AM +AERLYTQG++SYPRTESTAYP++F+F L + +P W +
Sbjct: 300 LKVASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPASFDFRGALAVLVHNPLWSND 359
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
V +LL GF + G+D GDHPPITPMRSATE L G DAW+LY+YI++HFI TVSPDC+
Sbjct: 360 VRTLLDAGFVKPRQGHDAGDHPPITPMRSATEEAL-GTDAWRLYQYISQHFIGTVSPDCR 418
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R IEF++GGE FH +G V G+T+IMPWL+V+E +LP+F KG
Sbjct: 419 YTRTAIEFTSGGETFHCVGYRVTHKGFTSIMPWLSVSENSLPAFRKG 465
Score = 502 bits (1292), Expect(2) = 0.0
Identities = 241/392 (61%), Positives = 288/392 (73%), Gaps = 6/392 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G T+PP YL+ESELISLMEK GIGTDASIPVHINNICERNY QV+SGR+L+PT LG TL
Sbjct: 477 EGSTTPPDYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVNSGRRLVPTPLGTTL 536
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITLIAKG DH +V++H +QQF K+ YF +IE MD
Sbjct: 537 IRGYQCIDADLCLPDIRSFIEQQITLIAKGKADHRQVIQHVIQQFMKKYSYFVKKIESMD 596
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCE+V+ LPQNG+IKLYKE+
Sbjct: 597 ALFEAQFSPLADSGRLLSKCGKCGRYMKYISTQPMRLYCITCEDVYYLPQNGSIKLYKEI 656
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL---GRGNRSLGMPC 764
+CPLD +EL+LF + GPD ++ PFE I G + + G+ + GMPC
Sbjct: 657 ICPLDGFELLLFSMVGPDAKSFPLCPFCYTNPPFEGIDKLFGALKIDDTGKVAKGAGMPC 716
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC SMI QGVCACPEC GTL+LDP SAPKWRL CN C+C+V LP +++ISTT
Sbjct: 717 CLCPHPTCKQSMITQGVCACPECSGTLILDPVSAPKWRLYCNMCNCIVLLPHAAHRISTT 776
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSF---PXXXX 413
++ C CEST++EV+FNK TPL +GATL++GCILCD+LLHS+I MKHGKSF
Sbjct: 777 DKKCLTCESTIIEVDFNKKTTPLQDGATLHEGCILCDDLLHSLIEMKHGKSFFMRRGRGR 836
Query: 412 XXXXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
+DP+MSFRDF
Sbjct: 837 GRGRGRGRGSSRGRGRRGNSRYDDPKMSFRDF 868
>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222861878|gb|EEE99420.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 837
Score = 622 bits (1604), Expect(2) = 0.0
Identities = 295/441 (66%), Positives = 355/441 (80%)
Frame = -3
Query: 2792 MRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVFSTDFPPAFQNWETTNPIDLFEAPIIK 2613
M +RK T+VHEF+G+F G + Y+KVTSVIGHVFS DFP +Q+W T+P DLF+API K
Sbjct: 1 MHSRKGTTEVHEFEGMFNGFRAYFKVTSVIGHVFSVDFPAKYQDWAATDPADLFQAPIHK 60
Query: 2612 GETNPKANICRHLQQEARGCDYLVLWLDCDREGENICFEVMDCTVDQLRKRTGQKVFRAR 2433
E NPKA+ICRHL QEARGC++LVLWLDCDREGENICFEV+ CT Q +KV+RAR
Sbjct: 61 AEANPKAHICRHLSQEARGCNHLVLWLDCDREGENICFEVIQCTGFQANDDR-RKVYRAR 119
Query: 2432 FSAVTERDILNAMNKLVEPNKNEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSSV 2253
FS+VTE+DIL AMN LVEPN+ EALAVDARQEIDLKVGVAFTRFQT +FQGKYGNLDS V
Sbjct: 120 FSSVTEKDILKAMNCLVEPNEYEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRV 179
Query: 2252 ISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQPYINKIGYQLCLQWDRAKVFDKDVAIM 2073
ISYGPCQTPTLGFCV+R+LQITTFKPE FW ++P++ GY+L L+W+R K+FD DVA+M
Sbjct: 180 ISYGPCQTPTLGFCVQRYLQITTFKPEKFWALRPHVMVDGYELQLEWERHKLFDLDVALM 239
Query: 2072 FQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNLLKVASSALGMGPHHAMQIAERLYTQG 1893
FQ+LV+ V ++ EK+E KGRP GLNTVNLLK+ASSALG GP MQ+AERLY QG
Sbjct: 240 FQKLVLQDRILEVTDMSEKQESKGRPPGLNTVNLLKIASSALGFGPQVTMQLAERLYIQG 299
Query: 1892 YVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDYVSSLLAKGFHPSKAGNDVGDHPPITP 1713
++SYPRTESTAYPS+F+F+ L +P WGDYV LL+ G+H ++G D GDHPPITP
Sbjct: 300 FISYPRTESTAYPSSFDFKGTLGALANNPMWGDYVQGLLSGGYHKPQSGKDAGDHPPITP 359
Query: 1712 MRSATESELGGGDAWKLYEYITKHFIATVSPDCKYMRKRIEFSAGGEKFHLIGRTVISPG 1533
MRSA E L G DAW+LY+Y+ +HF+ TVSPDCKY R ++EFS GGE FH IG V G
Sbjct: 360 MRSANEDML-GRDAWRLYQYVCQHFLGTVSPDCKYTRTKVEFSIGGEFFHCIGLHVTVKG 418
Query: 1532 YTAIMPWLAVNEENLPSFSKG 1470
+T+IMPWLAV+E+NLP F+KG
Sbjct: 419 FTSIMPWLAVSEKNLPQFAKG 439
Score = 506 bits (1303), Expect(2) = 0.0
Identities = 245/389 (62%), Positives = 286/389 (73%), Gaps = 3/389 (0%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G T PP YL+ESELISLMEK GIGTDASI VHINNICERNY QV +GR+L+PT LGITL
Sbjct: 451 EGQTVPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGITL 510
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IRGFIE QITL+AKG+ DH+ VV+H L+QF K+ YF QI+ MD
Sbjct: 511 IRGYQCIDPDLCLPDIRGFIEQQITLVAKGEADHSCVVQHVLEQFKRKYSYFVKQIDNMD 570
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR SKCGKC RYMKYIS +PSRLYC TCEEV+ LPQ GTIKLYKEL
Sbjct: 571 ALFEAQFSPLADSGRAFSKCGKCLRYMKYISSQPSRLYCGTCEEVYYLPQKGTIKLYKEL 630
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSLGRG---NRSLGMPC 764
CPLDN+EL++F + GP+G++ PFE I G G + GMPC
Sbjct: 631 TCPLDNFELLIFAMAGPEGKSFPLCPLCYNSPPFEGIDALFGASKTGSSGMLGKGAGMPC 690
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC HS+I QGVCACPEC+GTLVLDP SAPKWRL CN C+CLV LPQ +++ISTT
Sbjct: 691 FLCPHPTCRHSLIAQGVCACPECNGTLVLDPISAPKWRLYCNMCNCLVLLPQGAHRISTT 750
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
E C +C+ST++EV+FNKN TPL++GATL+ GCILCD LLHS++ +KHGKSF
Sbjct: 751 REQCPECDSTIIEVDFNKNTTPLEDGATLHVGCILCDNLLHSLVEVKHGKSF--FKRAGK 808
Query: 403 XXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
DP+MSFRDF
Sbjct: 809 WARARGRGAYRGRGRGLGKMDPKMSFRDF 837
>ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Brachypodium distachyon]
Length = 868
Score = 620 bits (1599), Expect(2) = 0.0
Identities = 296/467 (63%), Positives = 364/467 (77%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA VLMVAEKP G+M TRK TDVHEFDG F+G++ +++VTSVIGHVF
Sbjct: 1 MAPKVLMVAEKPSIALSIASAISGGRMSTRKGSTDVHEFDGTFQGSQAFFRVTSVIGHVF 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFPPA+QNWE T+P+DLF AP+++ E NPK +I RHL QEARGC YL+LWLDCDREGE
Sbjct: 61 SVDFPPAYQNWEGTDPVDLFNAPVLRSECNPKVHIRRHLAQEARGCTYLILWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NIC+EV++CT G+++FRA+FS+VTE+DI NAM+ LV PNK+EAL+VDARQEID
Sbjct: 121 NICYEVINCTGIP-ENEVGRRIFRAKFSSVTEKDISNAMDNLVLPNKDEALSVDARQEID 179
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGVAFTRFQTRYFQGKYGNLDS VISYGPCQTPTLGFCV+R+ QI TFKPE FW ++
Sbjct: 180 LKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQINTFKPEKFWSLRT 239
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
Y+ K G ++ L+WDR K+FD DV +MFQ++V N G+ V ++ KEE K RP+GLNTVNL
Sbjct: 240 YVIKDGDEIQLEWDRKKLFDFDVTVMFQKMVANDGTLIVTDISVKEECKARPSGLNTVNL 299
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG+GP AM +AERLYTQGY+SYPRTESTAYP++F+F S L +P W +
Sbjct: 300 LKVASSALGIGPQTAMHMAERLYTQGYISYPRTESTAYPASFDFRSVLSALVHNPLWSNN 359
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
+ +L+ GF + G+D GDHPPITPMRSA+E L DAW+LY+YI +HFI TVSPDC+
Sbjct: 360 IRTLMDAGFVKPRQGHDAGDHPPITPMRSASEEAL-ETDAWRLYQYICQHFIGTVSPDCR 418
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R +EF++GGE F +G V S G+T+IMPWLAV E NLP+F G
Sbjct: 419 YTRTAVEFTSGGEIFRCVGHRVTSKGFTSIMPWLAVAENNLPTFKNG 465
Score = 502 bits (1292), Expect(2) = 0.0
Identities = 242/392 (61%), Positives = 290/392 (73%), Gaps = 6/392 (1%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G T+PP YL+ESELISLMEK GIGTDASIPVHINNI ERNY QV+SGR+L+PT LG TL
Sbjct: 477 EGSTTPPDYLSESELISLMEKNGIGTDASIPVHINNISERNYVQVNSGRRLVPTALGTTL 536
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE QITLIAKG DH +V++H +QQF K+ YF +IE MD
Sbjct: 537 IRGYQCIDADLCLPDIRSFIEQQITLIAKGKADHLQVIQHVIQQFMKKYSYFVKKIENMD 596
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P R+YC TCEEV+ LPQNGTIKLYKE+
Sbjct: 597 ALFEAQFSPLADSGRLLSKCGKCGRYMKYISTQPMRMYCITCEEVYYLPQNGTIKLYKEI 656
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSL---GRGNRSLGMPC 764
+CPLD +EL+LF + GPD ++ PFE I G + L G+ + GMPC
Sbjct: 657 ICPLDGFELLLFSMVGPDAKSFPLCPCCYNSPPFEGIDKLFGAIKLDDTGKLGKGAGMPC 716
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C HPTC SMI QGVCACPEC GTL+LDP SAPKWRL CN C+C+V LP +++I+TT
Sbjct: 717 FLCPHPTCKQSMITQGVCACPECSGTLILDPVSAPKWRLLCNMCNCVVLLPHAAHRITTT 776
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSF---PXXXX 413
++ C+ CEST++EV+FNK TPL++GATL++GCILCDELLHS+I MKHGKSF
Sbjct: 777 DKKCSTCESTIIEVDFNKKATPLEDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGR 836
Query: 412 XXXXXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
++DP+MSFRDF
Sbjct: 837 GRGRARGRGGSRGRGRRGNSRHDDPKMSFRDF 868
>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
tuberosum]
Length = 860
Score = 618 bits (1594), Expect(2) = 0.0
Identities = 293/467 (62%), Positives = 362/467 (77%)
Frame = -3
Query: 2870 MAATVLMVAEKPXXXXXXXXXXXSGKMRTRKSRTDVHEFDGIFKGAKVYYKVTSVIGHVF 2691
MA VLMVAEKP + TR+ T+VHEFD +F G++ +YKVTSVIGHVF
Sbjct: 1 MAPKVLMVAEKPSIALSIASVLSGAHVSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVF 60
Query: 2690 STDFPPAFQNWETTNPIDLFEAPIIKGETNPKANICRHLQQEARGCDYLVLWLDCDREGE 2511
S DFP AFQ+W TTNP DLF+API+K ETNPKA+ICRHL QEARGC +LVLWLDCDREGE
Sbjct: 61 SVDFPAAFQDWTTTNPSDLFQAPILKKETNPKAHICRHLSQEARGCTHLVLWLDCDREGE 120
Query: 2510 NICFEVMDCTVDQLRKRTGQKVFRARFSAVTERDILNAMNKLVEPNKNEALAVDARQEID 2331
NI FEV++CT G++++RARFS+VTE+DIL AMN LVEPN++EAL+VDARQEID
Sbjct: 121 NISFEVIECT--GFHTSDGRRIYRARFSSVTEKDILKAMNNLVEPNRDEALSVDARQEID 178
Query: 2330 LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLQITTFKPEPFWIVQP 2151
LKVGV+FTRFQT YF GKYGNLD+ VISYGPCQTPTLGFCV+R+LQIT FKPE FW++ P
Sbjct: 179 LKVGVSFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRYLQITMFKPEKFWMLHP 238
Query: 2150 YINKIGYQLCLQWDRAKVFDKDVAIMFQQLVINSGSCTVFNLQEKEERKGRPAGLNTVNL 1971
YI GY+L L+W+R+++FD DV+ MF+ +I G V + EK E K RP+GLNTVNL
Sbjct: 239 YIMYKGYELKLEWERSRLFDADVSAMFRNRIIEDGIMKVVRVSEKLESKARPSGLNTVNL 298
Query: 1970 LKVASSALGMGPHHAMQIAERLYTQGYVSYPRTESTAYPSTFNFESNLRMQCRHPEWGDY 1791
LKVASSALG GP MQ+AERLYTQG++SYPRTESTAYPS+F+F+ L +P +G Y
Sbjct: 299 LKVASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAY 358
Query: 1790 VSSLLAKGFHPSKAGNDVGDHPPITPMRSATESELGGGDAWKLYEYITKHFIATVSPDCK 1611
LL + ++ +AG D GDHPPITPMRSA+E L G DAWKLY+YI +HF+ T+SPDCK
Sbjct: 359 AQKLLTESYNKPRAGTDAGDHPPITPMRSASEDSL-GNDAWKLYQYICQHFLGTLSPDCK 417
Query: 1610 YMRKRIEFSAGGEKFHLIGRTVISPGYTAIMPWLAVNEENLPSFSKG 1470
Y R ++EF +GGE+F +G+ G+T+IMPWLA++E+NLP F+ G
Sbjct: 418 YRRIKVEFESGGEQFQCVGQLATVKGFTSIMPWLAISEKNLPEFAVG 464
Score = 509 bits (1310), Expect(2) = 0.0
Identities = 243/389 (62%), Positives = 292/389 (75%), Gaps = 3/389 (0%)
Frame = -1
Query: 1474 KGHTSPPSYLTESELISLMEKYGIGTDASIPVHINNICERNYAQVHSGRQLIPTVLGITL 1295
+G+TSPP YLTESELISLMEK+GIGTDASI VHINNICERNY QV +GR+L PT LGI+L
Sbjct: 476 EGNTSPPDYLTESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLAPTPLGISL 535
Query: 1294 IRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSAKFMYFTTQIEKMD 1115
IRGYQCID DLCLP+IR FIE+QITL+AKG DH+ VV+H L+QF KF YF QI+ MD
Sbjct: 536 IRGYQCIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMD 595
Query: 1114 NLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHTLPQNGTIKLYKEL 935
LFEAQFSPL+DSGR+LSKCGKC RYMKYIS +P+RLYC TCEEV+ +PQ GT+KLYKEL
Sbjct: 596 ALFEAQFSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKEL 655
Query: 934 VCPLDNYELVLFCLPGPDGRTXXXXXXXXXXXPFEEIGNQLGEMSLG---RGNRSLGMPC 764
CPLDN+EL+L +PGP+G++ PFE I G G + + +GMPC
Sbjct: 656 TCPLDNFELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPC 715
Query: 763 SSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVYLPQNSYKISTT 584
C H TCPHS+I QGVCACPEC GTLVLDP SAPKWRL CN C+CLV LP+ +++ISTT
Sbjct: 716 FLCPHTTCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVSLPEGAHRISTT 775
Query: 583 EEHCNDCESTLLEVNFNKNNTPLDNGATLYKGCILCDELLHSMITMKHGKSFPXXXXXXX 404
++ C +C+ST++EV+FNK TPL +GATL+KGCILCDELLHS++ MKHG+SF
Sbjct: 776 QDKCPECDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEMKHGRSF----SRHG 831
Query: 403 XXXXXXXXXXXXXXXXXXNEDPRMSFRDF 317
+DP+MSFRDF
Sbjct: 832 RRGRGRGRGRGRGRGSTKQQDPKMSFRDF 860