BLASTX nr result
ID: Ephedra26_contig00021068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00021068
(883 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001776154.1| predicted protein [Physcomitrella patens] gi... 312 1e-82
ref|XP_004953907.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 308 2e-81
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 306 5e-81
emb|CBI32069.3| unnamed protein product [Vitis vinifera] 306 5e-81
ref|XP_006839141.1| hypothetical protein AMTR_s00090p00178540 [A... 305 2e-80
ref|XP_002454314.1| hypothetical protein SORBIDRAFT_04g028500 [S... 304 3e-80
ref|NP_001048065.1| Os02g0739000 [Oryza sativa Japonica Group] g... 303 7e-80
gb|EEE57776.1| hypothetical protein OsJ_08317 [Oryza sativa Japo... 303 7e-80
gb|EEC73969.1| hypothetical protein OsI_08870 [Oryza sativa Indi... 303 7e-80
ref|XP_006357217.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 301 2e-79
ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 301 2e-79
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth... 301 2e-79
ref|XP_006647863.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 301 2e-79
ref|XP_004238735.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 301 2e-79
ref|XP_006483752.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 300 6e-79
ref|XP_006438512.1| hypothetical protein CICLE_v10030551mg [Citr... 300 6e-79
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 300 6e-79
ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 300 6e-79
gb|EXB74741.1| DEAD-box ATP-dependent RNA helicase ISE2 [Morus n... 297 3e-78
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr... 296 9e-78
>ref|XP_001776154.1| predicted protein [Physcomitrella patens]
gi|162672529|gb|EDQ59065.1| predicted protein
[Physcomitrella patens]
Length = 1025
Score = 312 bits (799), Expect = 1e-82
Identities = 155/247 (62%), Positives = 196/247 (79%)
Frame = -3
Query: 743 DEFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXX 564
++ S EE+Q +RR QVP+++D++ QL ++MLPAIWFIFSR+GCD A Y
Sbjct: 262 EKMSDEEVQFLRRKQVPQIRDTLNQLKERDMLPAIWFIFSRRGCDLAVHYLLGTDLLTIE 321
Query: 563 EHLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVF 384
E +V A+D F+ +PD+VR+ AV+ LL G+A HHAGCLP WK+FIE+LFQQGL+KVVF
Sbjct: 322 EQRRVRKALDNFREQHPDSVREVAVKPLLHGVAAHHAGCLPTWKAFIEELFQQGLIKVVF 381
Query: 383 ATETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQT 204
ATETLAAGINMPARTTV++SLSKRG++GH+LLS+N++ QMAGRAGRRGID +GH V+VQT
Sbjct: 382 ATETLAAGINMPARTTVLASLSKRGDNGHQLLSANSMLQMAGRAGRRGIDEQGHTVVVQT 441
Query: 203 PFEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDE 24
PFEG E+CCKLLFAG DPLVSQF+A+YGM LN+L +V + G +MV V R+LDE
Sbjct: 442 PFEGAEDCCKLLFAGPDPLVSQFTATYGMALNLLAGARVKTTTESG-AVEMVKVGRSLDE 500
Query: 23 ARALIEK 3
ARALIEK
Sbjct: 501 ARALIEK 507
>ref|XP_004953907.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Setaria italica]
Length = 1174
Score = 308 bits (789), Expect = 2e-81
Identities = 154/246 (62%), Positives = 191/246 (77%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 417 QLSKHELSNMRRSQVPLIRDTLSQLWESDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 476
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +FK YPDAVR+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 477 ASEVELELRRFKMQYPDAVRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 536
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQTP
Sbjct: 537 TETLAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTP 596
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EGPEECC ++FAG +PLVSQF+ASYGMVLN+L KV +N K + K+ RTL+EA
Sbjct: 597 YEGPEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDLKVKRSGRTLEEA 656
Query: 20 RALIEK 3
R L+E+
Sbjct: 657 RKLVEQ 662
>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Vitis vinifera]
Length = 1174
Score = 306 bits (785), Expect = 5e-81
Identities = 157/252 (62%), Positives = 187/252 (74%)
Frame = -3
Query: 758 SNHESDEFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXX 579
S H SK +I IRR QVP++ D++ L ++MLPAIWFIFSRKGCD + QY
Sbjct: 404 SIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCN 463
Query: 578 XXXXXEHLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGL 399
E +V LA+ +F+ YPDAVR+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL
Sbjct: 464 LLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGL 523
Query: 398 LKVVFATETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHV 219
+KVVFATETLAAGINMPART VISSLSKRG G LSSN L QMAGRAGRRGID GH
Sbjct: 524 VKVVFATETLAAGINMPARTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHA 583
Query: 218 VIVQTPFEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVR 39
V+VQTP++G EECCKLLFAG +PLVSQF+ASYGMVLN+L KV N K++
Sbjct: 584 VLVQTPYDGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAG 643
Query: 38 RTLDEARALIEK 3
RTL+EAR L+E+
Sbjct: 644 RTLEEARKLVEQ 655
>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
Length = 1064
Score = 306 bits (785), Expect = 5e-81
Identities = 157/252 (62%), Positives = 187/252 (74%)
Frame = -3
Query: 758 SNHESDEFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXX 579
S H SK +I IRR QVP++ D++ L ++MLPAIWFIFSRKGCD + QY
Sbjct: 294 SIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCN 353
Query: 578 XXXXXEHLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGL 399
E +V LA+ +F+ YPDAVR+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL
Sbjct: 354 LLDESEMSEVDLALKRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGL 413
Query: 398 LKVVFATETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHV 219
+KVVFATETLAAGINMPART VISSLSKRG G LSSN L QMAGRAGRRGID GH
Sbjct: 414 VKVVFATETLAAGINMPARTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHA 473
Query: 218 VIVQTPFEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVR 39
V+VQTP++G EECCKLLFAG +PLVSQF+ASYGMVLN+L KV N K++
Sbjct: 474 VLVQTPYDGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAG 533
Query: 38 RTLDEARALIEK 3
RTL+EAR L+E+
Sbjct: 534 RTLEEARKLVEQ 545
>ref|XP_006839141.1| hypothetical protein AMTR_s00090p00178540 [Amborella trichopoda]
gi|548841657|gb|ERN01710.1| hypothetical protein
AMTR_s00090p00178540 [Amborella trichopoda]
Length = 1046
Score = 305 bits (780), Expect = 2e-80
Identities = 155/244 (63%), Positives = 189/244 (77%)
Frame = -3
Query: 734 SKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHL 555
S+ +I IRR QVP+++D++ L ++MLPAIWFIFSRKGCD A QY E
Sbjct: 285 SENDINIIRRSQVPQVRDTLRHLRARDMLPAIWFIFSRKGCDAAVQYLEECMLLDDCEMD 344
Query: 554 KVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATE 375
+V LA+ KF+T YPDA+R+ AVR L++G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATE
Sbjct: 345 EVGLALKKFRTQYPDAIREVAVRGLMRGVAAHHAGCLPLWKSFIEELFQRGLIKVVFATE 404
Query: 374 TLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFE 195
TLAAGINMPART VI+SLSK+ + G LLSSN L QMAGRAGRRGID +GHVV++QTPFE
Sbjct: 405 TLAAGINMPARTAVIASLSKKIDTGRILLSSNELLQMAGRAGRRGIDKQGHVVLIQTPFE 464
Query: 194 GPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARA 15
G EECCKLLFAG +PLVSQF+ASYGMVLN+L V K + K+ RTL+EAR
Sbjct: 465 GVEECCKLLFAGPEPLVSQFTASYGMVLNLLAGANVTRGSKEADVLKVFRAGRTLEEARQ 524
Query: 14 LIEK 3
L+E+
Sbjct: 525 LVEQ 528
>ref|XP_002454314.1| hypothetical protein SORBIDRAFT_04g028500 [Sorghum bicolor]
gi|241934145|gb|EES07290.1| hypothetical protein
SORBIDRAFT_04g028500 [Sorghum bicolor]
Length = 1173
Score = 304 bits (778), Expect = 3e-80
Identities = 154/247 (62%), Positives = 191/247 (77%), Gaps = 1/247 (0%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 415 QLSKHELSNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 474
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +FK YPDAVR+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 475 ASEVELELRRFKMQYPDAVRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 534
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQTP
Sbjct: 535 TETLAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHTVLVQTP 594
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNG-TKMVYVRRTLDE 24
+EGPEECC ++FAG +PLVSQF+ASYGMVLN+L KV +N K + K+ RTL+E
Sbjct: 595 YEGPEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDVNKVKRSGRTLEE 654
Query: 23 ARALIEK 3
AR L+E+
Sbjct: 655 ARKLVEQ 661
>ref|NP_001048065.1| Os02g0739000 [Oryza sativa Japonica Group]
gi|46390556|dbj|BAD16042.1| putative helicase [Oryza
sativa Japonica Group] gi|113537596|dbj|BAF09979.1|
Os02g0739000 [Oryza sativa Japonica Group]
gi|215704690|dbj|BAG94318.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 1179
Score = 303 bits (775), Expect = 7e-80
Identities = 151/246 (61%), Positives = 191/246 (77%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 422 QLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 481
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +F+ YPDA+R+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 482 ASEVELELKRFRMQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 541
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART+VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQT
Sbjct: 542 TETLAAGINMPARTSVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHSVLVQTT 601
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EGPEECC ++FAG +PLVSQF+ASYGMVLN+L KV +N K + K+ RTL+EA
Sbjct: 602 YEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDIKVKRSGRTLEEA 661
Query: 20 RALIEK 3
R L+E+
Sbjct: 662 RKLVEQ 667
>gb|EEE57776.1| hypothetical protein OsJ_08317 [Oryza sativa Japonica Group]
Length = 1140
Score = 303 bits (775), Expect = 7e-80
Identities = 151/246 (61%), Positives = 191/246 (77%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 422 QLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 481
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +F+ YPDA+R+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 482 ASEVELELKRFRMQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 541
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART+VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQT
Sbjct: 542 TETLAAGINMPARTSVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHSVLVQTT 601
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EGPEECC ++FAG +PLVSQF+ASYGMVLN+L KV +N K + K+ RTL+EA
Sbjct: 602 YEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDIKVKRSGRTLEEA 661
Query: 20 RALIEK 3
R L+E+
Sbjct: 662 RKLVEQ 667
>gb|EEC73969.1| hypothetical protein OsI_08870 [Oryza sativa Indica Group]
Length = 1065
Score = 303 bits (775), Expect = 7e-80
Identities = 151/246 (61%), Positives = 191/246 (77%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 347 QLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 406
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +F+ YPDA+R+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 407 ASEVELELKRFRMQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 466
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART+VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQT
Sbjct: 467 TETLAAGINMPARTSVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHSVLVQTT 526
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EGPEECC ++FAG +PLVSQF+ASYGMVLN+L KV +N K + K+ RTL+EA
Sbjct: 527 YEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDIKVKRSGRTLEEA 586
Query: 20 RALIEK 3
R L+E+
Sbjct: 587 RKLVEQ 592
>ref|XP_006357217.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1156
Score = 301 bits (772), Expect = 2e-79
Identities = 154/244 (63%), Positives = 187/244 (76%)
Frame = -3
Query: 734 SKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHL 555
SK +I +IRR QVP++ D++ L ++MLPA+WFIFSRKGCD A QY E
Sbjct: 395 SKNDISNIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETS 454
Query: 554 KVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATE 375
+V LA+ +F+ YPDAVR AV+ L +G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATE
Sbjct: 455 EVELALKRFRIQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE 514
Query: 374 TLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFE 195
TLAAGINMPART VISSL+KRG+ G LSSN LFQMAGRAGRRGID +GHVV+VQTP+E
Sbjct: 515 TLAAGINMPARTAVISSLTKRGDSGRIQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYE 574
Query: 194 GPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARA 15
GPEECCK+LF+G PLVSQF+ASYGMVLN++ KV + K+ RTL+EAR
Sbjct: 575 GPEECCKVLFSGLQPLVSQFTASYGMVLNLVAGAKVTRRSTGLDEIKVTRAGRTLEEARK 634
Query: 14 LIEK 3
LIE+
Sbjct: 635 LIEQ 638
>ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Brachypodium distachyon]
Length = 1168
Score = 301 bits (772), Expect = 2e-79
Identities = 151/246 (61%), Positives = 189/246 (76%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 411 QLSKHEVTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 470
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +F+ YPDA+R++AV+ L++G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 471 ASEVELELRRFRMQYPDAIRENAVKGLMRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 530
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQTP
Sbjct: 531 TETLAAGINMPARTAVISSLSKRIDAGRQLLTPNNLFQMAGRAGRRGIDTVGHSVLVQTP 590
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
EGPEECC ++FAG +PLVSQF+ASYGMVLN+L KV +N K K RTL+EA
Sbjct: 591 NEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESGDVKAKRSGRTLEEA 650
Query: 20 RALIEK 3
R L+E+
Sbjct: 651 RKLVEQ 656
>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
Length = 1159
Score = 301 bits (772), Expect = 2e-79
Identities = 163/294 (55%), Positives = 202/294 (68%), Gaps = 2/294 (0%)
Frame = -3
Query: 878 TKMNKNLTISRYTRENDDDFLYENXXXXXXXXXXXXXXKNSNHESD--EFSKEEIQHIRR 705
T MN+ L+++ + LY+ + E+D SK +I +IRR
Sbjct: 356 TSMNRKLSLNYLQYDESASELYKEEGSKRRK--------SRKRENDVRPLSKNDINNIRR 407
Query: 704 LQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHLKVCLAVDKFK 525
QVP++ D++ L ++MLPA+WFIFSRKGCD A QY E +V LA+ +F+
Sbjct: 408 SQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFR 467
Query: 524 TVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATETLAAGINMPA 345
YPDAVR AV+ L +G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATETLAAGINMPA
Sbjct: 468 IQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPA 527
Query: 344 RTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFEGPEECCKLLF 165
RT VISSLSKRG+ G LSSN L QMAGRAGRRGID +GHVV+VQTP+EGPEECCK+LF
Sbjct: 528 RTAVISSLSKRGDSGLVQLSSNELLQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLF 587
Query: 164 AGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARALIEK 3
+G PLVSQF+ASYGMVLN+L KV + K+ RTL+EAR LIE+
Sbjct: 588 SGLQPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQ 641
>ref|XP_006647863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Oryza brachyantha]
Length = 1182
Score = 301 bits (771), Expect = 2e-79
Identities = 150/246 (60%), Positives = 190/246 (77%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK E+ ++RR QVP ++D++ QL +MLPAIWFIFSR+GCD A +Y E
Sbjct: 425 QLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCE 484
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V L + +F+ YPDA+R+ AV+ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFA
Sbjct: 485 ASEVELELKRFRLQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA 544
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART VISSLSKR + G +LL+ N LFQMAGRAGRRGIDT GH V+VQT
Sbjct: 545 TETLAAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTIGHSVLVQTT 604
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EGPE+CC ++FAG +PLVSQF+ASYGMVLN+L KV +N K + K+ RTL+EA
Sbjct: 605 YEGPEDCCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDVKVKRSGRTLEEA 664
Query: 20 RALIEK 3
R L+E+
Sbjct: 665 RKLVEQ 670
>ref|XP_004238735.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Solanum lycopersicum]
Length = 1154
Score = 301 bits (771), Expect = 2e-79
Identities = 163/294 (55%), Positives = 202/294 (68%), Gaps = 2/294 (0%)
Frame = -3
Query: 878 TKMNKNLTISRYTRENDDDFLYENXXXXXXXXXXXXXXKNSNHESD--EFSKEEIQHIRR 705
T MN+ L+++ + LY + E+D SK +I +IRR
Sbjct: 351 TSMNRKLSLNYLQYDESGSELYREEGSKRRK--------SRRRENDVRPLSKNDISNIRR 402
Query: 704 LQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHLKVCLAVDKFK 525
QVP++ D++ L ++MLPA+WFIFSRKGCD A QY E +V LA+ +F+
Sbjct: 403 SQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECEMSEVELALKRFR 462
Query: 524 TVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATETLAAGINMPA 345
YPDAVR AV+ L +G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATETLAAGINMPA
Sbjct: 463 IQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPA 522
Query: 344 RTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFEGPEECCKLLF 165
RT VISSLSKRG+ G LSSN LFQMAGRAGRRGID +GHVV+VQTP+EGPEECCK+LF
Sbjct: 523 RTAVISSLSKRGDIGRIQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLF 582
Query: 164 AGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARALIEK 3
+G PLVSQF+ASYGMVLN++ KV + K+ RTL+EAR LIE+
Sbjct: 583 SGLQPLVSQFTASYGMVLNLVAGAKVTRRSTGLDEIKVTRSGRTLEEARKLIEQ 636
>ref|XP_006483752.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Citrus sinensis]
Length = 1174
Score = 300 bits (767), Expect = 6e-79
Identities = 151/246 (61%), Positives = 188/246 (76%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK I IRR QVP++ D++ L ++MLPAIWFIF+R+GCD A QY E
Sbjct: 412 QLSKNSINAIRRSQVPQVIDTLWHLRSRDMLPAIWFIFNRRGCDAAIQYLEDCNLLDECE 471
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V LA+ +F+ +YPDAVR+ A++ LLKG+A HHAGCLP+WKSFIE+LFQ+GL+KVVFA
Sbjct: 472 MSEVELALKRFRILYPDAVREPAIKGLLKGVAAHHAGCLPIWKSFIEELFQRGLVKVVFA 531
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART V+SSLSKR G L+SN LFQMAGRAGRRGID GHVV+VQTP
Sbjct: 532 TETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTP 591
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EG EECCKLLFAG +PLVSQF+ASYGMVLN+L KV++ + K + R+L+EA
Sbjct: 592 YEGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVMHLSNESDDMKALQAGRSLEEA 651
Query: 20 RALIEK 3
R L+E+
Sbjct: 652 RKLVEQ 657
>ref|XP_006438512.1| hypothetical protein CICLE_v10030551mg [Citrus clementina]
gi|557540708|gb|ESR51752.1| hypothetical protein
CICLE_v10030551mg [Citrus clementina]
Length = 1174
Score = 300 bits (767), Expect = 6e-79
Identities = 151/246 (61%), Positives = 188/246 (76%)
Frame = -3
Query: 740 EFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXE 561
+ SK I IRR QVP++ D++ L ++MLPAIWFIF+R+GCD A QY E
Sbjct: 412 QLSKNSINAIRRSQVPQVIDTLWHLRSRDMLPAIWFIFNRRGCDAAIQYLEDCNLLDECE 471
Query: 560 HLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFA 381
+V LA+ +F+ +YPDAVR+ A++ LLKG+A HHAGCLP+WKSFIE+LFQ+GL+KVVFA
Sbjct: 472 MSEVELALKRFRILYPDAVREPAIKGLLKGVAAHHAGCLPIWKSFIEELFQRGLVKVVFA 531
Query: 380 TETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTP 201
TETLAAGINMPART V+SSLSKR G L+SN LFQMAGRAGRRGID GHVV+VQTP
Sbjct: 532 TETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTP 591
Query: 200 FEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEA 21
+EG EECCKLLFAG +PLVSQF+ASYGMVLN+L KV++ + K + R+L+EA
Sbjct: 592 YEGAEECCKLLFAGVEPLVSQFTASYGMVLNLLAGAKVMHLSNESDDMKALQAGRSLEEA 651
Query: 20 RALIEK 3
R L+E+
Sbjct: 652 RKLVEQ 657
>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Cucumis sativus]
Length = 1168
Score = 300 bits (767), Expect = 6e-79
Identities = 154/244 (63%), Positives = 188/244 (77%)
Frame = -3
Query: 734 SKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHL 555
SK +I IRR VP++ D++ QL K+MLPA+WFIFSRKGCD A QY E
Sbjct: 415 SKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERS 474
Query: 554 KVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATE 375
+V LA+ KF+ +PDAVR+ A++ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATE
Sbjct: 475 EVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE 534
Query: 374 TLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFE 195
TLAAGINMPART VI+SLSKR N+G LS N L QMAGRAGRRGID +GHVV++QTP+E
Sbjct: 535 TLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYE 594
Query: 194 GPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARA 15
G EECCKLLFAG +PLVSQF+ASYGMVLN+L KV + + + TK RTL+EAR
Sbjct: 595 GAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEM-DETKAFQAWRTLEEARK 653
Query: 14 LIEK 3
L+E+
Sbjct: 654 LVEQ 657
>ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
ISE2, chloroplastic-like [Cucumis sativus]
Length = 1193
Score = 300 bits (767), Expect = 6e-79
Identities = 154/244 (63%), Positives = 188/244 (77%)
Frame = -3
Query: 734 SKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHL 555
SK +I IRR VP++ D++ QL K+MLPA+WFIFSRKGCD A QY E
Sbjct: 440 SKNDINSIRRSNVPQVIDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIDSSNLLDDCERS 499
Query: 554 KVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATE 375
+V LA+ KF+ +PDAVR+ A++ LL+G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATE
Sbjct: 500 EVELALRKFRIQFPDAVRESAIKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE 559
Query: 374 TLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFE 195
TLAAGINMPART VI+SLSKR N+G LS N L QMAGRAGRRGID +GHVV++QTP+E
Sbjct: 560 TLAAGINMPARTAVIASLSKRSNNGRTHLSPNELLQMAGRAGRRGIDKKGHVVLLQTPYE 619
Query: 194 GPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARA 15
G EECCKLLFAG +PLVSQF+ASYGMVLN+L KV + + + TK RTL+EAR
Sbjct: 620 GAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEM-DETKAFQAWRTLEEARK 678
Query: 14 LIEK 3
L+E+
Sbjct: 679 LVEQ 682
>gb|EXB74741.1| DEAD-box ATP-dependent RNA helicase ISE2 [Morus notabilis]
Length = 1123
Score = 297 bits (761), Expect = 3e-78
Identities = 152/244 (62%), Positives = 183/244 (75%)
Frame = -3
Query: 734 SKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXXXXEHL 555
SK +I IRR QVP++ D++ QL ++MLPAIWFIFSRKGCD A QY E
Sbjct: 408 SKNDINAIRRSQVPQITDTLWQLKARDMLPAIWFIFSRKGCDAAVQYLEDFNLLDDCETS 467
Query: 554 KVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKVVFATE 375
+V LA+ +F+ YPDAVR+ AV+ L +G+A HHAGCLPLWKSFIE+LFQ+GL+KVVFATE
Sbjct: 468 EVELALKRFRIQYPDAVRQTAVKGLRQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE 527
Query: 374 TLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIVQTPFE 195
TLAAGINMPARTT I+SLSKR +G LSSN L QMAGRAGRRGID +GHVV++QTP+E
Sbjct: 528 TLAAGINMPARTTAIASLSKRSENGRTRLSSNELLQMAGRAGRRGIDNKGHVVLIQTPYE 587
Query: 194 GPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTLDEARA 15
G EE CK+LFAG +PLVSQF+ASYGMVLN+L KV K RTL+EAR
Sbjct: 588 GAEESCKILFAGLEPLVSQFTASYGMVLNLLAGAKVTRRSSVSEDMKAFQTGRTLEEARK 647
Query: 14 LIEK 3
L+E+
Sbjct: 648 LVEQ 651
>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
DOB1 [Medicago truncatula]
Length = 1201
Score = 296 bits (757), Expect = 9e-78
Identities = 154/249 (61%), Positives = 186/249 (74%)
Frame = -3
Query: 749 ESDEFSKEEIQHIRRLQVPRLKDSVVQLIVKNMLPAIWFIFSRKGCDQAAQYXXXXXXXX 570
E SK +I IRR QVP++ D++ L ++MLPA+WFIFSRKGCD A QY
Sbjct: 430 EQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLD 489
Query: 569 XXEHLKVCLAVDKFKTVYPDAVRKDAVRYLLKGIAVHHAGCLPLWKSFIEDLFQQGLLKV 390
E +V LA+ +F+ YPDAVR+ AV+ LL+G+A HHAGCLPLWK+FIE+LFQ+GL+KV
Sbjct: 490 ECEASEVLLALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKV 549
Query: 389 VFATETLAAGINMPARTTVISSLSKRGNDGHELLSSNALFQMAGRAGRRGIDTEGHVVIV 210
VFATETLAAGINMPART VISSLSKR + G LL+SN L QMAGRAGRRGID GHVV+V
Sbjct: 550 VFATETLAAGINMPARTAVISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDESGHVVLV 609
Query: 209 QTPFEGPEECCKLLFAGSDPLVSQFSASYGMVLNILGARKVIYNDKHGNGTKMVYVRRTL 30
QTP EG EECCK+LF+G +PLVSQF+ASYGMVLN+LG K + + K +TL
Sbjct: 610 QTPNEGAEECCKVLFSGLEPLVSQFTASYGMVLNLLGGGKALRRSNTSDEMK-TSSGKTL 668
Query: 29 DEARALIEK 3
DEAR LIE+
Sbjct: 669 DEARKLIEQ 677