BLASTX nr result
ID: Ephedra26_contig00021054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00021054
(925 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26521.1| unknown [Picea sitchensis] 274 4e-71
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar... 273 9e-71
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ... 272 1e-70
gb|EMT21127.1| hypothetical protein F775_09199 [Aegilops tauschii] 272 1e-70
gb|EMJ17478.1| hypothetical protein PRUPE_ppa017414mg, partial [... 270 7e-70
ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Caps... 269 1e-69
ref|XP_006660540.1| PREDICTED: pentatricopeptide repeat-containi... 269 1e-69
gb|EOY30687.1| Tetratricopeptide repeat-like superfamily protein... 269 1e-69
gb|EMT13464.1| Pentatricopeptide repeat-containing protein [Aegi... 269 1e-69
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ... 268 2e-69
ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Caps... 267 4e-69
dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containi... 267 4e-69
gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japo... 267 4e-69
gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indi... 267 4e-69
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi... 266 6e-69
ref|NP_192184.1| pentatricopeptide repeat-containing protein [Ar... 266 8e-69
gb|ADE76509.1| unknown [Picea sitchensis] 266 1e-68
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat... 265 1e-68
ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutr... 265 2e-68
ref|XP_002319471.1| pentatricopeptide repeat-containing family p... 265 2e-68
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 274 bits (700), Expect = 4e-71
Identities = 123/261 (47%), Positives = 176/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV++ +F+S++ H + P +HY+CMVDL+ R+G EA F+ MP++P A +
Sbjct: 110 SHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASV 169
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WGSLL A R++ N+ PEN YV+LSN+YA+ G W+D ++R M
Sbjct: 170 WGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKD 229
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ VKK+PG SWI+++NKV+ F + SHP+I +I LETL Q + +GY+P+T+ VL D
Sbjct: 230 RSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHD 289
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ +K ++ HHSEKL +A+G++ P G IR+VKN+RVCGDCHT KF S++ R I
Sbjct: 290 VEEEQKEWILGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIV 349
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRD+ RFHHFK G CSC DYW
Sbjct: 350 LRDTHRFHHFKDGQCSCGDYW 370
>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
[Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 786
Score = 273 bits (697), Expect = 9e-71
Identities = 124/261 (47%), Positives = 179/261 (68%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
+H+GLVN ++F+ + V K++P+ HY CMVDL+ R+GL EA++F+E MPI+P
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WGSLLSA R++KN+ EPENS Y L+NLY++CG W + A+IR M
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
VKK+ G+SWI++K+KV+ F E+G+HPE +I ++ + ++ ++ GYVPDT+ VL D
Sbjct: 646 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 705
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
+++ K ++ HHSEKL +A+GL+ P +RI+KN+RVC DCHT +KF SK+ R I
Sbjct: 706 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 765
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD+TRFHHFK G CSC DYW
Sbjct: 766 VRDTTRFHHFKDGFCSCRDYW 786
>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324425|gb|EFH54845.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 786
Score = 272 bits (696), Expect = 1e-70
Identities = 124/261 (47%), Positives = 178/261 (68%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
+H+GLVN ++F+ + V K++P+ HY CMVDL+ R+GL EA++F+E MPI+P
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WGSLLSA R+YKN+ EPENS Y L+NLY++CG W + A+IR M
Sbjct: 586 WGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
VKK+ G+SWI++K+KV+ F E+G HP+ +I ++ + ++ ++ GYVPDT+ VL D
Sbjct: 646 GRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHD 705
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
+++ K ++ HHSEKL +A+GL+ P +RI+KN+RVC DCHT +KF SK+ R I
Sbjct: 706 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 765
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD+TRFHHFK G CSC DYW
Sbjct: 766 VRDTTRFHHFKDGFCSCRDYW 786
>gb|EMT21127.1| hypothetical protein F775_09199 [Aegilops tauschii]
Length = 923
Score = 272 bits (695), Expect = 1e-70
Identities = 126/261 (48%), Positives = 181/261 (69%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV++ +FF+S+S + + P +HY CMVDL R+G AE+F+ +MPI+P A +
Sbjct: 663 SHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGNVQGAEQFIYDMPIEPDAVI 722
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
W +LL A +I+KN EP NS YV+LSN+Y+S GMW +VAE+R M
Sbjct: 723 WSALLGACKIHKNAEIGRRAAERLFAIEPSNSGNYVMLSNIYSSLGMWVEVAEVRRIMKQ 782
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ V K+PG SW+QI+NKVY+F + + H +I ++ + L+ L + +GYVPDT VL D
Sbjct: 783 QGVTKEPGCSWMQIRNKVYSFVTGDKQHEQIEEVESTLQDLYTSLRTAGYVPDTEFVLHD 842
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
+D+ +K +L+HSEKL +AYGL+ P G+PI+I+KN+R+CGDCHTF KF S+VT+R I
Sbjct: 843 IDEEQKESSLLYHSEKLAVAYGLLVTPQGMPIQIMKNLRICGDCHTFFKFVSQVTKRDID 902
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD RFHHF++G CSC D+W
Sbjct: 903 IRDGNRFHHFRNGSCSCGDFW 923
>gb|EMJ17478.1| hypothetical protein PRUPE_ppa017414mg, partial [Prunus persica]
Length = 576
Score = 270 bits (689), Expect = 7e-70
Identities = 131/261 (50%), Positives = 173/261 (66%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV++ +F S+S H + PS HYTCMVDL R+G +EAE + MP+KP + +
Sbjct: 316 SHAGLVDEGWAYFNSMSQHHGITPSVYHYTCMVDLLGRAGWLSEAEDLIRCMPVKPDSVI 375
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
W +LL A RI++N + S YV+LSN+YAS GMW V EIR MT
Sbjct: 376 WEALLGACRIHRNTELGQRVAERLFQMGTKRSGTYVLLSNMYASRGMWGKVREIREMMTD 435
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ V K+PG SWIQIKNKV+ F E +H EI +IN + L F+ +GYVPDT+ VL D
Sbjct: 436 RGVTKEPGISWIQIKNKVHYFLMGEKAHDEIKEINMAVNELYRCFRATGYVPDTNFVLHD 495
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V + +K +L+HSEKL +AYG+++ P G PI+I+KN+R CGDCH+FMKF S V +R I
Sbjct: 496 VAEEQKEDDLLYHSEKLAVAYGILQTPNGAPIQILKNLRTCGDCHSFMKFVSSVAQRKII 555
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRD RFHHF+ G+CSC DYW
Sbjct: 556 LRDGNRFHHFQDGLCSCGDYW 576
>ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Capsella rubella]
gi|482558914|gb|EOA23106.1| hypothetical protein
CARUB_v10003899mg [Capsella rubella]
Length = 756
Score = 269 bits (688), Expect = 1e-69
Identities = 127/261 (48%), Positives = 179/261 (68%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV+ ++F +++ + + P++ HY CMVDL R+GL EA M+ MP +P A +
Sbjct: 496 SHTGLVDKGRQYFYTMTQDYGVTPNSQHYACMVDLLGRAGLLDEAHNLMKKMPFEPDAAI 555
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASR++ N EPENS YV+LSN+YAS G W DV ++R M
Sbjct: 556 WGTLLGASRVHGNTDLAETAADKIFAMEPENSGMYVLLSNIYASSGRWGDVGKLRVKMRD 615
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
K VKK PG+SWI+I+NK +TF+ + HPE KI A LE L + +++GYV TS+VL D
Sbjct: 616 KGVKKVPGYSWIEIQNKTHTFSVADEFHPEKDKIYAFLEDLELRIKKAGYVSKTSVVLHD 675
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK ++ +HSE+L +AYG+M +P+G PIR++KN+RVC DCH +K+ +K+T R+I
Sbjct: 676 VEEEEKERMVRYHSERLAVAYGIMHVPSGRPIRVIKNLRVCEDCHNAIKYMAKITGRLII 735
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRD+ RFHHFK G CSC DYW
Sbjct: 736 LRDNNRFHHFKDGSCSCGDYW 756
>ref|XP_006660540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Oryza brachyantha]
Length = 745
Score = 269 bits (687), Expect = 1e-69
Identities = 127/261 (48%), Positives = 175/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SHSGLV + +F S+ + +HYTCM+DL R+G AEA M++MP +P + M
Sbjct: 485 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 544
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASRI++N EPEN+ YV+LSN+YAS G W DV ++R M
Sbjct: 545 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDVGKMRVMMEE 604
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ VKK PG+SWI+++NKV+TF+ + HPE KI A LE L + +++GY+ T +VL D
Sbjct: 605 RGVKKVPGFSWIEVQNKVHTFSVGDCVHPEKEKIYAFLEDLDMRMKKAGYISATDMVLHD 664
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK H++ +HSEKL +AYG++ +P G PIR++KN+RVCGDCH K+ S + R+I
Sbjct: 665 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLII 724
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRDS RFHHFK G CSC DYW
Sbjct: 725 LRDSNRFHHFKGGSCSCGDYW 745
>gb|EOY30687.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 697
Score = 269 bits (687), Expect = 1e-69
Identities = 130/262 (49%), Positives = 175/262 (66%), Gaps = 1/262 (0%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GL+ + R+F+SIS H ++P+ DHY CM++L RSG EA ++NMP +P + +
Sbjct: 436 SHAGLIEEGRRYFDSISEQHSLIPTLDHYACMINLLGRSGCMREAVDLIKNMPHEPNSLI 495
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
W +LLS I ++ EP N+ PY++LSN+YA+CG W DVA +R M
Sbjct: 496 WSTLLSVCAIKGDIKHGEMAAKCLFGLEPHNAGPYIMLSNMYATCGRWEDVASVRSLMKI 555
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
K VKK +SWI+I N+V+ F SE+ SHPE I +L L+++ +E+G++PDT LVL +
Sbjct: 556 KNVKKFAAYSWIEIDNEVHKFVSEDRSHPETEIIYEELSRLIKKLKEAGFMPDTKLVLHN 615
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLP-AGLPIRIVKNVRVCGDCHTFMKFASKVTERVI 207
V + EK I +HSEKL LA+GL+K P A PIRI+KN+RVCGDCH FMKF SK+ R I
Sbjct: 616 VVEEEKFASICYHSEKLALAFGLIKKPQATKPIRIMKNIRVCGDCHLFMKFVSKIIGRPI 675
Query: 206 TLRDSTRFHHFKSGVCSCSDYW 141
LRDS RFHHF G CSC DYW
Sbjct: 676 ILRDSNRFHHFVGGSCSCKDYW 697
>gb|EMT13464.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 750
Score = 269 bits (687), Expect = 1e-69
Identities = 127/261 (48%), Positives = 175/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SHSGLV + +F S+ + +HYTCM+DL R+G EA+ M++MP +P A M
Sbjct: 490 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLDEAQGLMKDMPFEPDATM 549
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASRI++N EPEN+ YV+LSN+YAS G W DV ++R M
Sbjct: 550 WGALLGASRIHRNSKLGKSAAEKIFELEPENAGMYVLLSNIYASSGKWRDVGKMRVMMED 609
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ VKK PG+SW++++NKV+TF+ + HPE KI A LE L + +++GYV T +VL D
Sbjct: 610 RGVKKVPGFSWMEVQNKVHTFSVGDCVHPEKEKIYAFLEDLDMRIKKAGYVSATEMVLHD 669
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V+D EK H++ +HSEKL +AYG++ +P G PIR++KN+RVCGDCH K+ S + R+I
Sbjct: 670 VEDEEKEHMLKYHSEKLAVAYGILNIPVGRPIRVIKNLRVCGDCHNAFKYISAIEGRLII 729
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRDS RFHHF+ G CSC DYW
Sbjct: 730 LRDSNRFHHFRDGSCSCGDYW 750
>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318652|gb|EFH49074.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 776
Score = 268 bits (685), Expect = 2e-69
Identities = 128/261 (49%), Positives = 180/261 (68%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV+ ++F +++ + + P++ HY CMVDL R+GL EA M+NMP +P A +
Sbjct: 516 SHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAI 575
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASR++ N EPENS YV+LSNLYAS G W DV ++R M
Sbjct: 576 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 635
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
K VKK PG+SWI+I+NK +TF+ + HPE +I A LE L + +++GYV TS+VL D
Sbjct: 636 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHD 695
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK ++ +HSE+L +AYG+M++ +G PIR++KN+RVC DCH +K+ +KVT R+I
Sbjct: 696 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLII 755
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRD+ RFHHFK G CSC DYW
Sbjct: 756 LRDNNRFHHFKDGSCSCGDYW 776
>ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Capsella rubella]
gi|482564757|gb|EOA28947.1| hypothetical protein
CARUB_v10025197mg [Capsella rubella]
Length = 795
Score = 267 bits (683), Expect = 4e-69
Identities = 121/261 (46%), Positives = 177/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
+H+GLVN ++F + V+K+ P+ HY CMVDL+ R+GL EA++F+E MPI+P
Sbjct: 535 THAGLVNQGRQYFHMMKDVYKIEPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 594
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WGSLLSA R++KN+ EPENS Y L+NLY++CG W + A+IR M
Sbjct: 595 WGSLLSACRVHKNVDLGKVAAERLLLIEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 654
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
VKK+ G+SWI++K++V+ F E+G HP+ +I ++ + ++ ++ GY+PDT+ VL D
Sbjct: 655 GRVKKEQGFSWIEVKHRVHVFGVEDGVHPQKNEIYITMKKMWDEIKKMGYIPDTASVLHD 714
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
+++ K ++ HHSEKL +A+GL+ P +RI+KN+RVC DCHT +KF SK+ R I
Sbjct: 715 LEEEVKEQILRHHSEKLAIAFGLINTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 774
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD+TRFHHFK G CSC DYW
Sbjct: 775 VRDTTRFHHFKDGFCSCRDYW 795
>dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 267 bits (683), Expect = 4e-69
Identities = 126/261 (48%), Positives = 175/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SHSGLV + +F S+ + +HYTCM+DL R+G AEA M++MP +P + M
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASRI++N EPEN+ YV+LSN+YAS G W D ++R M
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ VKK PG+SWI+++NKV+TF++ + HPE KI A LE L + +++GYV T +VL D
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK H++ +HSEKL +AYG++ +P G PIR++KN+RVCGDCH K+ S + R+I
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 734
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRDS RFHHF+ G CSC DYW
Sbjct: 735 LRDSNRFHHFRGGSCSCGDYW 755
>gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 267 bits (683), Expect = 4e-69
Identities = 126/261 (48%), Positives = 175/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SHSGLV + +F S+ + +HYTCM+DL R+G AEA M++MP +P + M
Sbjct: 370 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 429
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASRI++N EPEN+ YV+LSN+YAS G W D ++R M
Sbjct: 430 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 489
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ VKK PG+SWI+++NKV+TF++ + HPE KI A LE L + +++GYV T +VL D
Sbjct: 490 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 549
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK H++ +HSEKL +AYG++ +P G PIR++KN+RVCGDCH K+ S + R+I
Sbjct: 550 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 609
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRDS RFHHF+ G CSC DYW
Sbjct: 610 LRDSNRFHHFRGGSCSCGDYW 630
>gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 267 bits (683), Expect = 4e-69
Identities = 126/261 (48%), Positives = 175/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SHSGLV + +F S+ + +HYTCM+DL R+G AEA M++MP +P + M
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASRI++N EPEN+ YV+LSN+YAS G W D ++R M
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ VKK PG+SWI+++NKV+TF++ + HPE KI A LE L + +++GYV T +VL D
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK H++ +HSEKL +AYG++ +P G PIR++KN+RVCGDCH K+ S + R+I
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 734
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRDS RFHHF+ G CSC DYW
Sbjct: 735 LRDSNRFHHFRGGSCSCGDYW 755
>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Brachypodium distachyon]
Length = 921
Score = 266 bits (681), Expect = 6e-69
Identities = 125/261 (47%), Positives = 180/261 (68%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV++ +FF+S+S + + P +HY CMVDL R+G AEKF+ +MPI+P +
Sbjct: 661 SHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVI 720
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
W +LL A +I+KN EP N+ YV+LSN+Y+S GMW +VAE+R M
Sbjct: 721 WSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQ 780
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
+ V K+PG SW+QI+NKV++F + + H +I +I+ L+ L + +GYVPDT VL D
Sbjct: 781 RGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHD 840
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
+D+ +K +L+HSEKL +AYGL+ P G+PI+I+KN+R+CGDCHTF+KF S VT+R I
Sbjct: 841 IDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDID 900
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD RFHHF++G CSC D+W
Sbjct: 901 IRDGNRFHHFRNGSCSCGDFW 921
>ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g02750 gi|4263522|gb|AAD15348.1| hypothetical protein
[Arabidopsis thaliana] gi|7269760|emb|CAB77760.1|
hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 266 bits (680), Expect = 8e-69
Identities = 125/261 (47%), Positives = 181/261 (69%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
SH+GLV+ ++F +++ + ++P++ HY CMVDL R+GL +A M+NMP +P A +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WG+LL ASR++ N EPENS YV+LSNLYAS G W DV ++R M
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
K VKK PG+SWI+I+NK +TF+ + HPE +I A LE L + +++GYV TS+VL D
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
V++ EK ++ +HSE+L +AYG+M++ +G PIR++KN+RVC DCH +K+ +++T R+I
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRD+ RFHHFK G CSC DYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 266 bits (679), Expect = 1e-68
Identities = 121/240 (50%), Positives = 164/240 (68%)
Frame = -3
Query: 860 MVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHMWGSLLSASRIYKNMXXXXXXX 681
+ P HY CM+DL R+G EA FM+ +P P A++WG+LL A R+Y N+
Sbjct: 7 IAPREVHYACMIDLLGRAGRLDEARDFMKTIPFAPDANVWGALLGACRMYGNIDLGKHAA 66
Query: 680 XXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTGKLVKKKPGWSWIQIKNKVYTF 501
EP N+ YV+LSN+YA+ G W+DVA++R M + V+K+PG SWI++KNKV+TF
Sbjct: 67 ECLFQLEPHNAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTF 126
Query: 500 ASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRDVDDNEKIHLILHHSEKLTLAY 321
E+ SHP+ +I + LE L Q + +GYVPDT+ VL DV+ +K H + HHSEKL +A+
Sbjct: 127 MVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNFVLHDVEMEQKEHSLYHHSEKLAIAF 186
Query: 320 GLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVITLRDSTRFHHFKSGVCSCSDYW 141
GL+ GLP+RI+KN+RVCGDCHT KF SK+ ER I +RD+ RFHHFK G+CSC DYW
Sbjct: 187 GLISTLPGLPVRIIKNLRVCGDCHTATKFISKIVEREIIIRDANRFHHFKDGLCSCGDYW 246
>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like isoform X1 [Glycine max]
gi|571497773|ref|XP_006594017.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g68930-like isoform X2 [Glycine max]
Length = 747
Score = 265 bits (678), Expect = 1e-68
Identities = 124/261 (47%), Positives = 178/261 (68%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
S +GLV + FES+ H+++P DHYTCM+DL++R+G EA KF+ MP P A
Sbjct: 487 SRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIG 546
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
W SLLS+ R ++NM EP N+ Y++LS++YA+ G W +VA +R M
Sbjct: 547 WASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRD 606
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
K ++K+PG SWI+ KN+V+ F++++ S+P +I ++LE L + + GYVPD + VL D
Sbjct: 607 KGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHD 666
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
VDD+EKI ++ HHSEKL +A+GL+ +P GLPIR+VKN+RVCGDCH K+ SK+T+R I
Sbjct: 667 VDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREIL 726
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD+ RFH FK G CSC D+W
Sbjct: 727 VRDAARFHLFKDGRCSCGDFW 747
>ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutrema salsugineum]
gi|557105783|gb|ESQ46108.1| hypothetical protein
EUTSA_v10000053mg [Eutrema salsugineum]
Length = 785
Score = 265 bits (677), Expect = 2e-68
Identities = 122/261 (46%), Positives = 175/261 (67%)
Frame = -3
Query: 923 SHSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHM 744
+H+GLVN ++F+ + V K+ P+ HY CMVDL+ R+GL EA +F ENMPI+P
Sbjct: 525 THAGLVNQGRQYFDRMKNVDKIEPTLSHYACMVDLFGRAGLLQEAHEFTENMPIEPDVVT 584
Query: 743 WGSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTG 564
WGSLLSA R++KN+ EPENS Y L+NLY++CG W + A++R M
Sbjct: 585 WGSLLSACRVHKNVELGKIAAEKLLLIEPENSGAYSALANLYSACGKWGEAAKVRKSMKD 644
Query: 563 KLVKKKPGWSWIQIKNKVYTFASEEGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
VKK+ G SWI++K+KV+ F E+G+H + +I ++ + ++ ++ GYVPDT+ VL D
Sbjct: 645 GRVKKEQGISWIEVKHKVHVFGVEDGTHLQKDEIYVTMKKIWDEIKKMGYVPDTASVLHD 704
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
+++ K ++ HHSEKL +A+GL+ P +RI+KN+RVC DCHT +KF SK+ R I
Sbjct: 705 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 764
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
+RD+TRFHHFK G CSC DYW
Sbjct: 765 VRDTTRFHHFKDGFCSCRDYW 785
>ref|XP_002319471.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222857847|gb|EEE95394.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 703
Score = 265 bits (676), Expect = 2e-68
Identities = 125/261 (47%), Positives = 172/261 (65%), Gaps = 1/261 (0%)
Frame = -3
Query: 920 HSGLVNDAVRFFESISGVHKMVPSTDHYTCMVDLYARSGLFAEAEKFMENMPIKPIAHMW 741
++G V + + FES+ +++ T+HY CMVDL R+G EA +ENMP++ A +W
Sbjct: 443 YTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 502
Query: 740 GSLLSASRIYKNMXXXXXXXXXXXXXEPENSVPYVILSNLYASCGMWNDVAEIRGYMTGK 561
G+LLSA R +KN+ EP ++ PY++LSNLYAS W DVAE+R M +
Sbjct: 503 GALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRAR 562
Query: 560 LVKKKPGWSWIQIKNKVYTFASE-EGSHPEIGKINAKLETLVEQFQESGYVPDTSLVLRD 384
V K PG SWI++ NKV+ F SHPE I KLE L +E+GY PD S V+ D
Sbjct: 563 NVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHD 622
Query: 383 VDDNEKIHLILHHSEKLTLAYGLMKLPAGLPIRIVKNVRVCGDCHTFMKFASKVTERVIT 204
VD+ +K+H + HHSEK+ +AYGL+K+P G PIR++KN+RVCGDCH+ +K ++VT R I
Sbjct: 623 VDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREII 682
Query: 203 LRDSTRFHHFKSGVCSCSDYW 141
LRD+ RFHHFK G+CSC D+W
Sbjct: 683 LRDANRFHHFKDGLCSCRDFW 703