BLASTX nr result

ID: Ephedra26_contig00021033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00021033
         (1080 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              47   1e-09

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 47.0 bits (110), Expect(2) = 1e-09
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
 Frame = -3

Query: 457 SLPQRSRIMVTTRNLKVVETW--REIPGFEFEEFRMEEIPRFEAKKMLSYYALRDENGSF 284
           S  ++ R+++T R+L V ++   +  P    +E+RM+ I   EA  +L    +     + 
Sbjct: 428 SKAKKVRLLITARDLNVRKSCPLKTAP----KEYRMKAISSMEATNLLKM-EMFGHMETI 482

Query: 283 DEXXXXXXXXXLCMGVPLLIEMAAKKLRNLNIKCSMGMAEACRNVIEHMQSLKNGEGWEK 104
                       C G+PL++++ A+ LR    K      E    V++ ++ LK GE + +
Sbjct: 483 LYSYQVNHIIKKCGGIPLMLKLVARALRFAKDK------EEVDQVLDELEKLK-GEDFGR 535

Query: 103 DDMDRMVDFVYGQLPESFQRIFLDIVFFFINW 8
           D ++  + F Y +LPE  +  FLDI  +F  W
Sbjct: 536 DKIESYL-FAYDKLPEDCKDPFLDICSYFEGW 566



 Score = 43.1 bits (100), Expect(2) = 1e-09
 Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
 Frame = -2

Query: 1070 IVKCTVSLAQHINQSSFKRFACAYPDSMELQSMRDALMLKYQNTQLKTLMDIYKNVPRLP 891
            IV+ ++     +  S F  F     +  EL  +   L +KY++  ++  ++IY +V +  
Sbjct: 229  IVEGSIKCCSQMASSQFSNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIY-DVGQCK 287

Query: 890  QAPSKVYCASDAVGIEGAMEEVKKKLNMG-DASXXXXXXXXXXXXXKTTLGDHVYNSV-V 717
            +A         AVG+E +  EV   L  G   +             KTTL D V++ V +
Sbjct: 288  KANLSRRYPEHAVGLEESSREVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAVFSMVDI 347

Query: 716  DKSKYSHCKLEMDIKS-TDVPKLQFDLLSQVFQERE--EVLNAREGQGRISKAIEKSSKQ 546
             + +YS  +L  +I S   + +LQ  +L  + +     ++    +GQ  +S+ +E  S  
Sbjct: 348  KECQYSTVQLFENIDSFPKIIELQKLILRDLTRSENIPQIRKHEDGQRELSRVLEDVS-- 405

Query: 545  SQSKPLFLYIDNAMIKGEVDE 483
                  F+YIDNA+ + E+ +
Sbjct: 406  -----AFIYIDNALGERELGQ 421


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