BLASTX nr result

ID: Ephedra26_contig00020922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00020922
         (677 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75737.1| unknown [Picea sitchensis]                             165   1e-38
ref|XP_006856458.1| hypothetical protein AMTR_s00046p00010710 [A...    60   5e-07
ref|XP_006854942.1| hypothetical protein AMTR_s00052p00146690 [A...    59   2e-06
ref|XP_004154752.1| PREDICTED: sister chromatid cohesion 1 prote...    58   3e-06
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote...    58   3e-06

>gb|ADE75737.1| unknown [Picea sitchensis]
          Length = 678

 Score =  165 bits (417), Expect = 1e-38
 Identities = 89/226 (39%), Positives = 137/226 (60%), Gaps = 1/226 (0%)
 Frame = +3

Query: 3   IVLSNESMKKQLQNTQDIRRTRKRVPFTSLTIWKAHRRCNMQKVFSESSIPGLSSELQES 182
           IVLSN+ MKKQL++T D+ RTR RV  + L IWKA+R  ++Q+ FSE S+PG+S++LQE 
Sbjct: 360 IVLSNKFMKKQLEDTDDLCRTRTRVLCSKLEIWKAYRNSHIQQSFSEPSLPGMSTDLQEI 419

Query: 183 FRNVFTAQRLKVSFRDPPDQHFVGAHEDKSKFFEVPEMEPAEFEPTFSEVPEIETARFAT 362
           F+ VFT Q ++V+F +PP   F   HE+                P   + PEIET R A 
Sbjct: 420 FKKVFTGQGVRVAFAEPPTTGFREGHEE---------------SPKSPQAPEIETTRLAP 464

Query: 363 TVNDSISPGGSENLQRMEDTTVEANEDANTGMEIPGILEEDPVTELGNLRTRKPADFDFQ 542
              +++SP G     RME+ T +A E+     ++P +LE + + ELG +RT +P D +F+
Sbjct: 465 PEVEAVSPVGFGTPYRMEEPTFQATEEIELEAQMPEVLEPEVIVELGEVRTDEPTDLEFE 524

Query: 543 MPSRQSIEEGEQMSF-GTPVVGVSLYDDQDDQFPRDVEDNAGNAGS 677
            PS+  + E EQ+     P VG+S+Y+++ DQ  + +E+++  A S
Sbjct: 525 TPSQHGLGEAEQVPLEEVPSVGLSVYEEEGDQGLKFLEEDSRYAAS 570


>ref|XP_006856458.1| hypothetical protein AMTR_s00046p00010710 [Amborella trichopoda]
           gi|548860339|gb|ERN17925.1| hypothetical protein
           AMTR_s00046p00010710 [Amborella trichopoda]
          Length = 808

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   IVLSNESMKKQLQNTQDIRRTRKRVPFTSLTIWKAHRRCNMQKVFSESSIPGLSSELQES 182
           IVLSNE MK QLQ+   + R RK+ P + L + +A++  +M ++F E SIP L   LQE+
Sbjct: 341 IVLSNEDMKMQLQDASKLVRKRKKCPVSILDVREAYKSSHMDQIFLEPSIPDLCMPLQEA 400

Query: 183 FRNVFTAQRLK-VSFRDP 233
           F+ V  A ++   S  DP
Sbjct: 401 FKKVLLAPKVAGPSVEDP 418


>ref|XP_006854942.1| hypothetical protein AMTR_s00052p00146690 [Amborella trichopoda]
           gi|548858667|gb|ERN16409.1| hypothetical protein
           AMTR_s00052p00146690 [Amborella trichopoda]
          Length = 541

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 1/207 (0%)
 Frame = +3

Query: 3   IVLSNESMKKQLQNTQDIRRTRKRVPFTSLTIWKAHRRCNMQKVFSESSIPGLSSELQES 182
           IVLSNE MK QLQ+   + R RK+ P ++L + +A+R  ++ ++F E SIP L   LQE+
Sbjct: 308 IVLSNEDMKMQLQDASKLVRKRKKCPVSTLDVREAYRSSHIDQIFLEPSIPDLCMPLQEA 367

Query: 183 FRNVFTAQRLK-VSFRDPPDQHFVGAHEDKSKFFEVPEMEPAEFEPTFSEVPEIETARFA 359
            + +  A ++   S  DP     V + +  S    +P     E E  F E  +  T    
Sbjct: 368 LKKMLLAPKVAGPSVEDPQGPKRVQSPDGPS---SIPN---EEIEQAFVEDQQEIT---- 417

Query: 360 TTVNDSISPGGSENLQRMEDTTVEANEDANTGMEIPGILEEDPVTELGNLRTRKPADFDF 539
                 +  G S  +   E+T     ED   G+  P                R P+    
Sbjct: 418 ---RAPLPAGRSTRVVPNEETGQVPIEDPQEGIRAPSC-------------ARTPS---- 457

Query: 540 QMPSRQSIEEGEQMSFGTPVVGVSLYD 620
             PS + I+   Q+ + +P +G S Y+
Sbjct: 458 -TPS-EEIDSFPQLPYPSPRIGDSTYE 482


>ref|XP_004154752.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
           sativus]
          Length = 664

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
 Frame = +3

Query: 6   VLSNESMKKQLQNTQDIRRTRKRVPFTSLTIWKAHRRCNMQKVFSESSIPGLSSELQESF 185
           VL+N+ MKK L+++ D+ R R+ +P +SL +WK + +   +KVF   SI GL   L + F
Sbjct: 326 VLTNKFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLREKKVFHHPSITGLCHNLSDIF 385

Query: 186 RNVFTAQRLKVSFRDPPDQHFVGAH------EDKSKFFEVPEMEPAEFEPTFSEVP 335
              + A + +    +   ++F  A       E  S     P + P      ++E+P
Sbjct: 386 NVDYIATKCRTISLEEALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIP 441


>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
           sativus]
          Length = 908

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
 Frame = +3

Query: 6   VLSNESMKKQLQNTQDIRRTRKRVPFTSLTIWKAHRRCNMQKVFSESSIPGLSSELQESF 185
           VL+N+ MKK L+++ D+ R R+ +P +SL +WK + +   +KVF   SI GL   L + F
Sbjct: 561 VLTNKFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLREKKVFHHPSITGLCHNLSDIF 620

Query: 186 RNVFTAQRLKVSFRDPPDQHFVGAH------EDKSKFFEVPEMEPAEFEPTFSEVP 335
              + A + +    +   ++F  A       E  S     P + P      ++E+P
Sbjct: 621 NVDYIATKCRTISLEEALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIP 676


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