BLASTX nr result
ID: Ephedra26_contig00020879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00020879
(580 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006664042.1| PREDICTED: glycine-rich RNA-binding protein ... 77 2e-12
ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein ... 76 7e-12
ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein ... 76 7e-12
gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bamb... 74 2e-11
ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group] g... 74 3e-11
gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indi... 74 3e-11
ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein ... 73 5e-11
gb|ADE76094.1| unknown [Picea sitchensis] 73 5e-11
ref|XP_006585775.1| PREDICTED: glycine-rich RNA-binding protein ... 72 8e-11
ref|XP_004955701.1| PREDICTED: glycine-rich RNA-binding protein ... 72 8e-11
ref|XP_003552565.1| PREDICTED: glycine-rich RNA-binding protein ... 72 8e-11
ref|XP_003531854.1| PREDICTED: glycine-rich RNA-binding protein ... 72 8e-11
gb|ACU23248.1| unknown [Glycine max] 72 8e-11
ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducib... 72 1e-10
gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax] 72 1e-10
gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays] 72 1e-10
ref|NP_001150149.1| LOC100283778 [Zea mays] gi|195605606|gb|ACG2... 72 1e-10
gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar] ... 72 1e-10
ref|XP_005587438.1| PREDICTED: cold-inducible RNA-binding protei... 71 2e-10
ref|XP_005587434.1| PREDICTED: cold-inducible RNA-binding protei... 71 2e-10
>ref|XP_006664042.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 258
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/115 (33%), Positives = 71/115 (61%)
Frame = +2
Query: 107 MALAKVLANISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 286
MALA + N+ + T S+ SL +S ++++K+FVGGLS ++++L D+F++YG++
Sbjct: 1 MALANKIGNLLKKATSSSPSLYQSIRC---MSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 287 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRAA 451
++ +I+ ++T +GFGFI ++ + GK++DGR I V AT R +
Sbjct: 58 IEARIITDRETGRSRGFGFITYTSSEEASAAITALDGKDLDGRNIRVNTATERTS 112
>ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 75.9 bits (185), Expect = 7e-12
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Frame = +2
Query: 125 LANISQIYTKSAASLLRS---------FHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSY 277
L+ + +I+++S+AS +RS F ++++KVFVGGLS +D+ LT++F+ Y
Sbjct: 4 LSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKY 63
Query: 278 GKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRAA 451
G++V+ VI + T +GFGF+ F + G+++DGR+I AT RA+
Sbjct: 64 GEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRAS 121
>ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 75.9 bits (185), Expect = 7e-12
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Frame = +2
Query: 125 LANISQIYTKSAASLLRS---------FHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSY 277
L+ + +I+++S+AS +RS F ++++KVFVGGLS +D+ LT++F+ Y
Sbjct: 4 LSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKY 63
Query: 278 GKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRAA 451
G++V+ VI + T +GFGF+ F + G+++DGR+I AT RA+
Sbjct: 64 GEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRAS 121
>gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/105 (36%), Positives = 62/105 (59%)
Frame = +2
Query: 137 SQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKK 316
S + + ++ + N A L +TK+FVGGLS +D++L D+F+S+G++V+ VI+ +
Sbjct: 14 SALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRD 73
Query: 317 TKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRAA 451
T +GFGF+ FS M G+E++GR I+V A R A
Sbjct: 74 TGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANERPA 118
>ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa
Japonica Group] gi|125579440|gb|EAZ20586.1| hypothetical
protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 258
Score = 73.9 bits (180), Expect = 3e-11
Identities = 37/113 (32%), Positives = 69/113 (61%)
Frame = +2
Query: 107 MALAKVLANISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 286
MALA + N+ + T S+ +L +S ++++K+FVGGLS ++++L D+F++YG++
Sbjct: 1 MALANKIGNLLKRATSSSPALYQSIRC---MSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 287 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIR 445
++ +I+ ++T +GFGFI ++ + GK++DGR I V A R
Sbjct: 58 IEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 73.9 bits (180), Expect = 3e-11
Identities = 37/113 (32%), Positives = 69/113 (61%)
Frame = +2
Query: 107 MALAKVLANISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 286
MALA + N+ + T S+ +L +S ++++K+FVGGLS ++++L D+F++YG++
Sbjct: 1 MALANKIGNLLKRATSSSPALYQSIRC---MSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 287 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIR 445
++ +I+ ++T +GFGFI ++ + GK++DGR I V A R
Sbjct: 58 IEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Setaria italica]
Length = 168
Score = 73.2 bits (178), Expect = 5e-11
Identities = 37/103 (35%), Positives = 60/103 (58%)
Frame = +2
Query: 137 SQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKK 316
S + + + AS + N A L +TK+FVGGLS +D+TL +FS++G++ + +I+ ++
Sbjct: 14 SALTSGAPASSAPALFNAARLMSTKLFVGGLSWGTDDQTLRQAFSTFGEVTEARIITDRE 73
Query: 317 TKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIR 445
T +GFGF+ FS M G+E+DGR + V A R
Sbjct: 74 TGRSRGFGFVNFSNSDEAKEAVSSMDGQELDGRSVRVNFANER 116
>gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 73.2 bits (178), Expect = 5e-11
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +2
Query: 203 NTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXX 382
N K+FVGGLS D N+K L D+FS YG+I++V VI + + KGFGF++F+
Sbjct: 34 NKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNAL 93
Query: 383 XXMHGKEIDGRKINVKRATIRAAEKQKKRRTV 478
M G+ +DGR I V A RA + + V
Sbjct: 94 KEMDGQSLDGRNIRVNFANTRARQDSAPPKAV 125
>ref|XP_006585775.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X2 [Glycine max]
gi|571472960|ref|XP_006585776.1| PREDICTED: glycine-rich
RNA-binding protein 3, mitochondrial-like isoform X3
[Glycine max] gi|571472962|ref|XP_006585777.1|
PREDICTED: glycine-rich RNA-binding protein 3,
mitochondrial-like isoform X4 [Glycine max]
Length = 249
Score = 72.4 bits (176), Expect = 8e-11
Identities = 37/106 (34%), Positives = 65/106 (61%)
Frame = +2
Query: 131 NISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 310
+I+Q ++ S SL ++ + +++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 22 HINQDFSVSTPSLFQAIRS---MSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 78
Query: 311 KKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRA 448
++T +GFGFI F+ M G+++ GR+I V AT R+
Sbjct: 79 RETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 124
>ref|XP_004955701.1| PREDICTED: glycine-rich RNA-binding protein 7-like [Setaria
italica]
Length = 307
Score = 72.4 bits (176), Expect = 8e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +2
Query: 209 KVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXX 388
++FVGGLS D + TLT +F YGK++D V+ ++ T +GFGF+ FS
Sbjct: 8 RIFVGGLSWDTTEGTLTRTFGQYGKVIDAQVVVERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 389 MHGKEIDGRKINVKRATIRAAE 454
MH E+DGR I+V +A R A+
Sbjct: 68 MHNGELDGRNISVNKAQPRNAD 89
>ref|XP_003552565.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 244
Score = 72.4 bits (176), Expect = 8e-11
Identities = 36/106 (33%), Positives = 65/106 (61%)
Frame = +2
Query: 131 NISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 310
+I+Q ++ S SL ++ + +++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 18 HINQDFSASTPSLFQAIRS---MSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 74
Query: 311 KKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRA 448
++T +GFGF+ F+ M G+++ GR+I V AT R+
Sbjct: 75 RETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
>ref|XP_003531854.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Glycine max]
Length = 245
Score = 72.4 bits (176), Expect = 8e-11
Identities = 37/106 (34%), Positives = 65/106 (61%)
Frame = +2
Query: 131 NISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 310
+I+Q ++ S SL ++ + +++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 18 HINQDFSVSTPSLFQAIRS---MSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 74
Query: 311 KKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRA 448
++T +GFGFI F+ M G+++ GR+I V AT R+
Sbjct: 75 RETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
>gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 72.4 bits (176), Expect = 8e-11
Identities = 36/106 (33%), Positives = 65/106 (61%)
Frame = +2
Query: 131 NISQIYTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 310
+I+Q ++ S SL ++ + +++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 18 HINQDFSASTPSLFQAIRS---MSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 74
Query: 311 KKTKDPKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRATIRA 448
++T +GFGF+ F+ M G+++ GR+I V AT R+
Sbjct: 75 RETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
>ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding protein
[Cavia porcellus]
Length = 173
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +2
Query: 209 KVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXX 388
K+F+GGLS D N+++L + FS YG+I +V V+ ++T+ +GFGF+ F
Sbjct: 7 KLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 389 MHGKEIDGRKINVKRATIRAAEKQKKRRTVGS 484
M+GK +DGR+I V +A +AA+ + + GS
Sbjct: 67 MNGKSVDGRQIRVDQAG-KAADSRSRGYRGGS 97
>gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +2
Query: 209 KVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXX 388
K+FVGGLS D N+++L D FS YG+I +V VI ++T+ +GFGF+ F
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLA 65
Query: 389 MHGKEIDGRKINVKRA 436
M+GK +DGR+I V +A
Sbjct: 66 MNGKSLDGRQIRVDQA 81
>gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +2
Query: 185 NTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXX 364
N A L +TK+F+GGL +D L ++FSS+G++ + VI+ ++T +GFGF+ +S
Sbjct: 30 NAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSD 89
Query: 365 XXXXXXXXMHGKEIDGRKINVKRATIRAA 451
M GKEIDGR++ V A R A
Sbjct: 90 AAKEAISAMDGKEIDGRQVRVNMANERPA 118
>ref|NP_001150149.1| LOC100283778 [Zea mays] gi|195605606|gb|ACG24633.1| glycine-rich
RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding
protein 2 [Zea mays] gi|195637130|gb|ACG38033.1|
glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding
protein 2 [Zea mays] gi|238009788|gb|ACR35929.1| unknown
[Zea mays] gi|413951537|gb|AFW84186.1| glycine-rich
RNA-binding protein 2 [Zea mays]
Length = 156
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +2
Query: 185 NTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXX 364
N A L +TK+F+GGL +D L ++FSS+G++ + VI+ ++T +GFGF+ +S
Sbjct: 30 NAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSD 89
Query: 365 XXXXXXXXMHGKEIDGRKINVKRATIRAA 451
M GKEIDGR++ V A R A
Sbjct: 90 AAKEAISAMDGKEIDGRQVRVNMANERPA 118
>gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding
protein [Salmo salar]
Length = 167
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +2
Query: 209 KVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXX 388
K+FVGGLS D N+++L D FS YG+I +V VI ++T+ +GFGF+ F
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLA 65
Query: 389 MHGKEIDGRKINVKRA 436
M+GK +DGR+I V +A
Sbjct: 66 MNGKSLDGRQIRVDQA 81
>ref|XP_005587438.1| PREDICTED: cold-inducible RNA-binding protein isoform X14 [Macaca
fascicularis]
Length = 202
Score = 71.2 bits (173), Expect = 2e-10
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +2
Query: 146 YTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKD 325
+ K AA+ S + K+FVGGLS D N+++L FS YG+I +V V+ ++T+
Sbjct: 20 FRKQAAASPASTQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQR 79
Query: 326 PKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRA 436
+GFGF+ F M+GK +DGR+I V +A
Sbjct: 80 SRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 116
>ref|XP_005587434.1| PREDICTED: cold-inducible RNA-binding protein isoform X10 [Macaca
fascicularis]
Length = 229
Score = 71.2 bits (173), Expect = 2e-10
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +2
Query: 146 YTKSAASLLRSFHNTAPLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKD 325
+ K AA+ S + K+FVGGLS D N+++L FS YG+I +V V+ ++T+
Sbjct: 20 FRKQAAASPASTQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQR 79
Query: 326 PKGFGFIKFSXXXXXXXXXXXMHGKEIDGRKINVKRA 436
+GFGF+ F M+GK +DGR+I V +A
Sbjct: 80 SRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 116