BLASTX nr result

ID: Ephedra26_contig00020857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00020857
         (1284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599572.1| Photosystem I P700 chlorophyll a apoprotein ...   607   0.0  
ref|XP_003606036.1| Photosystem I P700 chlorophyll a apoprotein ...   541   0.0  
ref|YP_002519945.1| photosystem I P700 apoprotein A1 (chloroplas...   659   0.0  
ref|YP_001876567.1| photosystem I P700 apoprotein A1 [Welwitschi...   646   0.0  
dbj|BAH11238.1| photosystem I P700 apoprotein A1 (chloroplast) [...   644   0.0  
ref|YP_002519792.1| photosystem I P700 apoprotein A1 [Gnetum par...   639   e-180
dbj|BAF64868.1| photosystem I P700 chlorophyll a apoprotein A1 [...   639   e-180
dbj|BAN16915.1| photosystem I P700 apoprotein A1 (chloroplast) [...   638   e-180
gb|AET48355.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET48068.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET47852.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET47134.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET46918.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET46630.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET46486.1| photosystem I P700 chlorophyll a apoprotein A1, p...   636   e-180
gb|AET45843.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET44916.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET44845.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
gb|AET44702.1| photosystem I P700 chlorophyll a apoprotein A1 (c...   636   e-180
ref|NP_042464.1| photosystem I P700 chlorophyll a apoprotein A1 ...   636   e-180

>ref|XP_003599572.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
            gi|355488620|gb|AES69823.1| Photosystem I P700
            chlorophyll a apoprotein [Medicago truncatula]
          Length = 1487

 Score =  607 bits (1566), Expect(2) = 0.0
 Identities = 289/327 (88%), Positives = 298/327 (91%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YN+L DR+LRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 421  DYDPTTRYNDLLDRILRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 480

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQP+FAQW+QNTH                  WGG DLV VG KVALLPIPLGTADFL
Sbjct: 481  AIQLQPVFAQWIQNTHALAPGTTAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFL 540

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 541  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 600

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYN+ISVVIFHFSWKMQSDVWG+I+ QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 601  GLFWMYNSISVVIFHFSWKMQSDVWGSINDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 660

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA 
Sbjct: 661  ASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAT 720

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTW 982
            QPRALSIVQGRAVGV HYLLGGI TTW
Sbjct: 721  QPRALSIVQGRAVGVTHYLLGGIATTW 747



 Score =  167 bits (423), Expect(2) = 0.0
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = +1

Query: 1030 TIMISRFPKFSQGLSQDPTTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIF 1209
            +IM  RFP+FSQGL+QDPTTRRIWFGIATAHDFESHDDITEE+LYQ IFASHFGQLAIIF
Sbjct: 752  SIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIF 811

Query: 1210 LWTSGNLFHVAWQGNFEFWINDPLH 1284
            LWTSGNLFHVAWQGNFE W+ DPLH
Sbjct: 812  LWTSGNLFHVAWQGNFEAWVQDPLH 836



 Score =  282 bits (721), Expect = 2e-73
 Identities = 149/347 (42%), Positives = 199/347 (57%), Gaps = 15/347 (4%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DY+   + +N+  R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+      
Sbjct: 1150 DYNPEQNEDNVLARMLEHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ---- 1205

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXX-------WGGNDLVTVGTKVALLPIP 340
             I ++PIFAQW+Q+ H                         W    L  +      L + 
Sbjct: 1206 -ILIEPIFAQWIQSAHGKTSYGFDVLLSSTNSPALSAGRSIWLPGWLNAINENSNSLFLT 1264

Query: 341  LGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVS 520
            +G  DFLVHH  A  +H T LIL+KG L AR S+L+PDK + G+ FPCDGPGRGGTC +S
Sbjct: 1265 IGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDIS 1324

Query: 521  AWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWL 700
            AWD  +L +FWM N I  V F++ WK  +   GN+S            F +SS  + GWL
Sbjct: 1325 AWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVS-----------QFNESSTYLMGWL 1373

Query: 701  RDFLWAQASQVIQSYG----SALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVW 868
            RD+LW  +SQ+I  Y     ++LS +   FL  H VWA   MFL S RGYWQELIE++ W
Sbjct: 1374 RDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAW 1433

Query: 869  AHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLA 997
            AH +  +A  I    +P ALSIVQ R VG+ H+ +G I T  +F +A
Sbjct: 1434 AHERTPLANLIRWRDKPVALSIVQARLVGLVHFSVGYIFTYAAFLIA 1480



 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ +++ P TT  IW   A AHDF+SH    EE + +++F++HFGQL+IIFLW SG  F
Sbjct: 40   FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 98

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+NDP H
Sbjct: 99   HGARFSNYEAWLNDPTH 115


>ref|XP_003606036.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
            gi|355507091|gb|AES88233.1| Photosystem I P700
            chlorophyll a apoprotein [Medicago truncatula]
          Length = 1460

 Score =  541 bits (1393), Expect(2) = 0.0
 Identities = 263/327 (80%), Positives = 271/327 (82%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YN+L DR+LRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 421  DYDPTTRYNDLLDRILRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 480

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQP+FAQW+QNTH                  WGG DLV VG KVALLPIPLGTADFL
Sbjct: 481  AIQLQPVFAQWIQNTHALAPGTTAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFL 540

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 541  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 600

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYN+ISVVIFHFSWKMQSDVWG+I+ QGVVTHITGGNFAQSS+TINGWLR      
Sbjct: 601  GLFWMYNSISVVIFHFSWKMQSDVWGSINDQGVVTHITGGNFAQSSITINGWLR------ 654

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
                                 AHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPA 
Sbjct: 655  ---------------------AHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAT 693

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTW 982
            QPRALSIVQGRAVGV HYLLGGI TTW
Sbjct: 694  QPRALSIVQGRAVGVTHYLLGGIATTW 720



 Score =  167 bits (423), Expect(2) = 0.0
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = +1

Query: 1030 TIMISRFPKFSQGLSQDPTTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIF 1209
            +IM  RFP+FSQGL+QDPTTRRIWFGIATAHDFESHDDITEE+LYQ IFASHFGQLAIIF
Sbjct: 725  SIMALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIF 784

Query: 1210 LWTSGNLFHVAWQGNFEFWINDPLH 1284
            LWTSGNLFHVAWQGNFE W+ DPLH
Sbjct: 785  LWTSGNLFHVAWQGNFEAWVQDPLH 809



 Score =  282 bits (721), Expect = 2e-73
 Identities = 149/347 (42%), Positives = 199/347 (57%), Gaps = 15/347 (4%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DY+   + +N+  R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+      
Sbjct: 1123 DYNPEQNEDNVLARMLEHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ---- 1178

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXX-------WGGNDLVTVGTKVALLPIP 340
             I ++PIFAQW+Q+ H                         W    L  +      L + 
Sbjct: 1179 -ILIEPIFAQWIQSAHGKTSYGFDVLLSSTNSPALSAGRSIWLPGWLNAINENSNSLFLT 1237

Query: 341  LGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVS 520
            +G  DFLVHH  A  +H T LIL+KG L AR S+L+PDK + G+ FPCDGPGRGGTC +S
Sbjct: 1238 IGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDIS 1297

Query: 521  AWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWL 700
            AWD  +L +FWM N I  V F++ WK  +   GN+S            F +SS  + GWL
Sbjct: 1298 AWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVS-----------QFNESSTYLMGWL 1346

Query: 701  RDFLWAQASQVIQSYG----SALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVW 868
            RD+LW  +SQ+I  Y     ++LS +   FL  H VWA   MFL S RGYWQELIE++ W
Sbjct: 1347 RDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAW 1406

Query: 869  AHNKLKVAPAI----QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLA 997
            AH +  +A  I    +P ALSIVQ R VG+ H+ +G I T  +F +A
Sbjct: 1407 AHERTPLANLIRWRDKPVALSIVQARLVGLVHFSVGYIFTYAAFLIA 1453



 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ +++ P TT  IW   A AHDF+SH    EE + +++F++HFGQL+IIFLW SG  F
Sbjct: 40   FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 98

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+NDP H
Sbjct: 99   HGARFSNYEAWLNDPTH 115


>ref|YP_002519945.1| photosystem I P700 apoprotein A1 (chloroplast) [Ephedra equisetina]
            gi|220983546|dbj|BAH11313.1| photosystem I P700
            apoprotein A1 (chloroplast) [Ephedra equisetina]
          Length = 750

 Score =  659 bits (1699), Expect = 0.0
 Identities = 320/338 (94%), Positives = 321/338 (94%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 413  DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 472

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTHV                 WGGNDLVTVGTKVALLPIPLGTADFL
Sbjct: 473  AIQLQPIFAQWVQNTHVTAPRFTAPAATASTSFTWGGNDLVTVGTKVALLPIPLGTADFL 532

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 533  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 592

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ
Sbjct: 593  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 652

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 653  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 712

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 1015
            QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE
Sbjct: 713  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 750



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 14/102 (13%)
 Frame = +1

Query: 1021 ADVTIMISRFP------------KFSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQ 1158
            ++V IM+ R P             FS+ L++ DP TT  IW   A AHDF+SH +  EE 
Sbjct: 8    SEVKIMVERDPIKTSFEKWANPGHFSRTLAKGDPETTTWIWNLHADAHDFDSHTEDLEE- 66

Query: 1159 LYQQIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            + ++IF++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 67   ISRKIFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 108


>ref|YP_001876567.1| photosystem I P700 apoprotein A1 [Welwitschia mirabilis]
            gi|205803606|sp|Q9MUK2.2|PSAA_WELMI RecName:
            Full=Photosystem I P700 chlorophyll a apoprotein A1;
            AltName: Full=PSI-A; AltName: Full=PsaA
            gi|163311622|gb|ABY26780.1| photosystem I P700 apoprotein
            A1 [Welwitschia mirabilis]
          Length = 751

 Score =  646 bits (1667), Expect = 0.0
 Identities = 312/338 (92%), Positives = 316/338 (93%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYDSTTSYNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 414  DYDSTTSYNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 473

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQWLQNTHV                 WGG D++TVG KVALLPIPLGTADFL
Sbjct: 474  AIQLQPIFAQWLQNTHVTAPSFTAPAATASTSLTWGGGDIITVGNKVALLPIPLGTADFL 533

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 534  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 593

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 594  GLFWMYNAISVVIFHFSWKMQSDVWGNISKQGVVTHITGGNFAQSSITINGWLRDFLWAQ 653

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 654  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 713

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 1015
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 714  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 751



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1057 FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNL 1230
            FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF W SG  
Sbjct: 32   FSKTLSKTDPETTTWIWNLHADAHDFDSHTEDLEE-ISRKVFSAHFGQLAIIFTWLSGMY 90

Query: 1231 FHVAWQGNFEFWINDPLH 1284
            FH A   N+E W+ DP H
Sbjct: 91   FHGARFSNYEAWLADPTH 108


>dbj|BAH11238.1| photosystem I P700 apoprotein A1 (chloroplast) [Welwitschia
            mirabilis]
          Length = 751

 Score =  644 bits (1661), Expect = 0.0
 Identities = 311/338 (92%), Positives = 315/338 (93%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYDSTTSYNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQD FSDT
Sbjct: 414  DYDSTTSYNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDTFSDT 473

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQWLQNTHV                 WGG D++TVG KVALLPIPLGTADFL
Sbjct: 474  AIQLQPIFAQWLQNTHVTAPSFTAPAATASTSLTWGGGDIITVGNKVALLPIPLGTADFL 533

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 534  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 593

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 594  GLFWMYNAISVVIFHFSWKMQSDVWGNISKQGVVTHITGGNFAQSSITINGWLRDFLWAQ 653

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 654  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 713

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 1015
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 714  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 751



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1057 FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNL 1230
            FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF W SG  
Sbjct: 32   FSKTLSKTDPETTTWIWNLHADAHDFDSHTEDLEE-ISRKVFSAHFGQLAIIFTWLSGMY 90

Query: 1231 FHVAWQGNFEFWINDPLH 1284
            FH A   N+E W+ DP H
Sbjct: 91   FHGARFSNYEAWLADPTH 108


>ref|YP_002519792.1| photosystem I P700 apoprotein A1 [Gnetum parvifolium]
            gi|512721565|ref|YP_008082185.1| photosystem I P700
            apoprotein A1 (chloroplast) [Gnetum montanum]
            gi|220983535|dbj|BAH11303.1| photosystem I P700
            apoprotein A1 (chloroplast) [Gnetum parvifolium]
            gi|490345010|gb|AGL11030.1| photosystem I P700 apoprotein
            A1 (chloroplast) [Gnetum montanum]
          Length = 757

 Score =  639 bits (1647), Expect = e-180
 Identities = 310/338 (91%), Positives = 314/338 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYDSTTSYNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 420  DYDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 479

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTHV                 WGG DLVTVGTKVALLPI LGTADFL
Sbjct: 480  AIQLQPIFAQWIQNTHVTAPNLTAPAATASTSLTWGGGDLVTVGTKVALLPIQLGTADFL 539

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 540  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 599

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYN+ISVVIFHFSWKMQSDVWG I+ QGVVTHITGGNFAQSSVTINGWLRDFLWAQ
Sbjct: 600  GLFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 659

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGSALSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 660  ASQVIQSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 719

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 1015
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 720  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 757



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
 Frame = +1

Query: 967  NCHNMVVLPSKNYCSRIIADVTIMISRFPK------FSQGLSQ-DP-TTRRIWFGIATAH 1122
            N  N +++ S     +I+ +  ++ + F K      FS+ LS+ DP TT  IW   A AH
Sbjct: 2    NKENSMIIRSPESEVKIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAH 61

Query: 1123 DFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPL 1281
            DF+SH +  EE + +++F++HFGQLAII  W SG  FH A   N+E W+ DP+
Sbjct: 62   DFDSHTEDLEE-ISRKVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPV 113


>dbj|BAF64868.1| photosystem I P700 chlorophyll a apoprotein A1 [Gnetum parvifolium]
          Length = 751

 Score =  639 bits (1647), Expect = e-180
 Identities = 310/338 (91%), Positives = 314/338 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYDSTTSYNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 414  DYDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 473

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTHV                 WGG DLVTVGTKVALLPI LGTADFL
Sbjct: 474  AIQLQPIFAQWIQNTHVTAPNLTAPAATASTSLTWGGGDLVTVGTKVALLPIQLGTADFL 533

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 534  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 593

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYN+ISVVIFHFSWKMQSDVWG I+ QGVVTHITGGNFAQSSVTINGWLRDFLWAQ
Sbjct: 594  GLFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 653

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGSALSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 654  ASQVIQSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 713

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 1015
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAVE
Sbjct: 714  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAVE 751



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 8/98 (8%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQ 1167
            +I+ +  ++ + F K      FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +
Sbjct: 11   KIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAHDFDSHTEDLEE-ISR 69

Query: 1168 QIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPL 1281
            ++F++HFGQLAII  W SG  FH A   N+E W+ DP+
Sbjct: 70   KVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPV 107


>dbj|BAN16915.1| photosystem I P700 apoprotein A1 (chloroplast) [Gnetum ula]
          Length = 751

 Score =  638 bits (1646), Expect = e-180
 Identities = 309/338 (91%), Positives = 314/338 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYDSTTSYNNL DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 414  DYDSTTSYNNLLDRVLRHRDAIISHLNWICIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 473

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTHV                 WGG DLVTVGTKVALLPI LGTADFL
Sbjct: 474  AIQLQPIFAQWIQNTHVTAPNLTAPAATASTSLTWGGGDLVTVGTKVALLPIQLGTADFL 533

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 534  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 593

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYN+ISVVIFHFSWKMQSDVWG I+ QGVVTHITGGNFAQSSVTINGWLRDFLWAQ
Sbjct: 594  GLFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 653

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGSALSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 654  ASQVIQSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 713

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAVE 1015
            QPRALSIVQGRAVGVAHYLLGG+VTTW+FFLARIIAVE
Sbjct: 714  QPRALSIVQGRAVGVAHYLLGGVVTTWAFFLARIIAVE 751



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 8/98 (8%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQ-DP-TTRRIWFGIATAHDFESHDDITEEQLYQ 1167
            +I+ +  ++ + F K      FS+ LS+ DP TT  IW   A AHDF+SH +  EE + +
Sbjct: 11   KIVVEKDLIRTSFEKWANPGHFSKTLSKGDPETTTWIWNLHADAHDFDSHTEDLEE-ISR 69

Query: 1168 QIFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPL 1281
            ++F++HFGQLAII  W SG  FH A   N+E W+ DP+
Sbjct: 70   KVFSAHFGQLAIILTWLSGMYFHGARFSNYEAWLADPV 107


>gb|AET48355.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            halepensis]
          Length = 756

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 419  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 478

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 479  AIQLQPIFAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 538

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 539  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 598

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 599  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 658

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 659  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 718

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 719  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 755



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQ 1170
            +I+ D   + + F K      FS+ L++ P TT  IW   A AHDF+SH +  EE + ++
Sbjct: 17   KIVVDRDTVKTSFEKWAKPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLEE-ISRK 75

Query: 1171 IFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            +F++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 76   VFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 113


>gb|AET48068.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            jeffreyi]
          Length = 753

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHALAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 752



 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ L++ P TT  IW   A AHDF+SH +  E+ + +++F++HFGQLAIIF+W SG  F
Sbjct: 35   FSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRKVFSAHFGQLAIIFIWLSGMYF 93

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+ DP H
Sbjct: 94   HGARFSNYEAWLADPTH 110


>gb|AET47852.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            latteri]
          Length = 753

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 752



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQ 1170
            +I+ D   + + F K      FS+ L++ P TT  IW   A AHDF+SH +  EE + ++
Sbjct: 14   KIVVDRDTVKTSFEKWAKPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLEE-ISRK 72

Query: 1171 IFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            +F++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 73   VFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 110


>gb|AET47134.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            muricata]
          Length = 753

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHALAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 752



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++IF++HFGQLAIIF+W SG  F
Sbjct: 35   FSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRKIFSAHFGQLAIIFIWLSGMYF 93

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+ DP H
Sbjct: 94   HGARFSNYEAWLADPTH 110


>gb|AET46918.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            occidentalis]
          Length = 753

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHALAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 752



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++IF++HFGQLAIIF+W SG  F
Sbjct: 35   FSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRKIFSAHFGQLAIIFIWLSGMYF 93

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+ DP H
Sbjct: 94   HGARFSNYEAWLADPTH 110


>gb|AET46630.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            pinea]
          Length = 756

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 419  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 478

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 479  AIQLQPIFAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 538

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 539  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 598

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 599  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 658

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 659  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 718

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 719  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 755



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ L++ P TT  IW   A AHDF+SH +  EE + +++F++HFGQLAIIF+W SG  F
Sbjct: 38   FSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLEE-ISRKVFSAHFGQLAIIFIWLSGMYF 96

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+ DP H
Sbjct: 97   HGARFSNYEAWLADPTH 113


>gb|AET46486.1| photosystem I P700 chlorophyll a apoprotein A1, partial (chloroplast)
            [Pinus ponderosa var. scopulorum]
          Length = 752

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 415  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 474

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 475  AIQLQPIFAQWIQNTHALAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 534

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 535  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 594

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 595  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 654

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 655  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 714

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 715  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 751



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQ 1170
            +I+ D   + + F K      FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++
Sbjct: 13   KIVVDRDTVKTSFEKWAKPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRK 71

Query: 1171 IFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            +F++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 72   VFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 109


>gb|AET45843.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            roxburghii] gi|357000346|gb|AET48212.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            heldreichii]
          Length = 756

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 419  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 478

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 479  AIQLQPIFAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 538

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 539  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 598

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 599  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 658

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 659  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 718

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 719  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 755



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQ 1170
            +I+ D   + + F K      FS+ L++ P TT  IW   A AHDF+SH +  EE + ++
Sbjct: 17   KIVVDRDTVKTSFEKWAKPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLEE-ISRK 75

Query: 1171 IFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            +F++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 76   VFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 113


>gb|AET44916.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            arizonica] gi|356997219|gb|AET45128.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            yecorensis] gi|356997871|gb|AET45771.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            sabiniana] gi|356999107|gb|AET46990.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            pseudostrobus var. apulcensis]
            gi|356999470|gb|AET47348.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            montezumae] gi|357000418|gb|AET48283.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            hartwegii] gi|357000782|gb|AET48642.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            engelmannii] gi|357001076|gb|AET48932.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            douglasiana] gi|357001150|gb|AET49005.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            hartwegii] gi|357001296|gb|AET49149.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            devoniana] gi|357001802|gb|AET49648.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            coulteri] gi|357001875|gb|AET49720.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            arizonica var. cooperi]
          Length = 753

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHALAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 752



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQ 1170
            +I+ D   + + F K      FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++
Sbjct: 14   KIVVDRDTVKTSFEKWAKPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRK 72

Query: 1171 IFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            +F++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 73   VFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 110


>gb|AET44845.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            brutia]
          Length = 756

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 419  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 478

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 479  AIQLQPIFAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 538

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 539  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 598

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 599  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 658

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 659  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 718

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 719  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 755



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1012 RIIADVTIMISRFPK------FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQ 1170
            +I+ D   + + F K      FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++
Sbjct: 17   KIVVDRDTVKTSFEKWAKPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRK 75

Query: 1171 IFASHFGQLAIIFLWTSGNLFHVAWQGNFEFWINDPLH 1284
            +F++HFGQLAIIF+W SG  FH A   N+E W+ DP H
Sbjct: 76   VFSAHFGQLAIIFIWLSGMYFHGARFSNYEAWLADPTH 113


>gb|AET44702.1| photosystem I P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            caribaea] gi|356998163|gb|AET46059.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus radiata]
            gi|356998888|gb|AET46774.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus patula]
            gi|356998961|gb|AET46846.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            palustris] gi|356999762|gb|AET47636.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            leiophylla] gi|357000563|gb|AET48426.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            greggii] gi|357000636|gb|AET48498.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus glabra]
            gi|357000855|gb|AET48714.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            elliottii] gi|357001001|gb|AET48858.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            echinata] gi|357001729|gb|AET49576.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            cubensis]
          Length = 753

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHALAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIAV
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAV 752



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++IF++HFGQLAIIF+W SG  F
Sbjct: 35   FSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRKIFSAHFGQLAIIFIWLSGMYF 93

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+ DP H
Sbjct: 94   HGARFSNYEAWLADPTH 110


>ref|NP_042464.1| photosystem I P700 chlorophyll a apoprotein A1 [Pinus thunbergii]
            gi|1172656|sp|P41639.1|PSAA_PINTH RecName:
            Full=Photosystem I P700 chlorophyll a apoprotein A1;
            AltName: Full=PSI-A; AltName: Full=PsaA
            gi|1262704|dbj|BAA04419.1| PSI P700 apoprotein A1 [Pinus
            thunbergii] gi|356997148|gb|AET45058.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            yunnanensis] gi|357000054|gb|AET47924.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            kesiya] gi|357000273|gb|AET48140.1| photosystem I P700
            chlorophyll a apoprotein A1 (chloroplast) [Pinus
            hwangshanensis] gi|357000709|gb|AET48570.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            fragilissima] gi|357001369|gb|AET49221.1| photosystem I
            P700 chlorophyll a apoprotein A1 (chloroplast) [Pinus
            densata]
          Length = 753

 Score =  636 bits (1640), Expect = e-180
 Identities = 305/337 (90%), Positives = 312/337 (92%)
 Frame = +2

Query: 2    DYDSTTSYNNLFDRVLRHRDAIISHLNWTCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 181
            DYD TT YNNL DRVLRHRDAI+SHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDT
Sbjct: 416  DYDPTTQYNNLLDRVLRHRDAIVSHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDT 475

Query: 182  AIQLQPIFAQWLQNTHVXXXXXXXXXXXXXXXXXWGGNDLVTVGTKVALLPIPLGTADFL 361
            AIQLQPIFAQW+QNTH                  WGG DLVTVG+KVALLPIPLGTADFL
Sbjct: 476  AIQLQPIFAQWIQNTHASAPGSTAPGATASTSLTWGGGDLVTVGSKVALLPIPLGTADFL 535

Query: 362  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 541
            VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL
Sbjct: 536  VHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFL 595

Query: 542  GLFWMYNAISVVIFHFSWKMQSDVWGNISTQGVVTHITGGNFAQSSVTINGWLRDFLWAQ 721
            GLFWMYNAISVVIFHFSWKMQSDVWGNIS QGVVTHITGGNFAQSS+TINGWLRDFLWAQ
Sbjct: 596  GLFWMYNAISVVIFHFSWKMQSDVWGNISDQGVVTHITGGNFAQSSITINGWLRDFLWAQ 655

Query: 722  ASQVIQSYGSALSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 901
            ASQVIQSYGS+LSAYGL FLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI
Sbjct: 656  ASQVIQSYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAI 715

Query: 902  QPRALSIVQGRAVGVAHYLLGGIVTTWSFFLARIIAV 1012
            QPRALSIVQGRAVGVAHYLLGGIVTTW+FFLARIIA+
Sbjct: 716  QPRALSIVQGRAVGVAHYLLGGIVTTWAFFLARIIAI 752



 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1057 FSQGLSQDP-TTRRIWFGIATAHDFESHDDITEEQLYQQIFASHFGQLAIIFLWTSGNLF 1233
            FS+ L++ P TT  IW   A AHDF+SH +  E+ + ++IF++HFGQLAIIF+W SG  +
Sbjct: 35   FSRTLAKGPDTTTWIWNLHADAHDFDSHTNNLED-ISRKIFSAHFGQLAIIFIWLSGMYY 93

Query: 1234 HVAWQGNFEFWINDPLH 1284
            H A   N+E W+ DP H
Sbjct: 94   HGARFSNYEAWLADPTH 110


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