BLASTX nr result

ID: Ephedra26_contig00020856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00020856
         (431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765177.1| predicted protein [Physcomitrella patens] gi...    55   7e-06

>ref|XP_001765177.1| predicted protein [Physcomitrella patens]
           gi|162683496|gb|EDQ69905.1| predicted protein
           [Physcomitrella patens]
          Length = 393

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/125 (28%), Positives = 58/125 (46%)
 Frame = +3

Query: 3   PGCISFGSSSNLWMIMGASQVERSDEKQSTESNATATGVKDSAVTCLRVMKVYRTESSKE 182
           P  +SF  ++NLWM+ GA++                 G+  +AVT ++V +         
Sbjct: 285 PSSLSFDCNNNLWMVAGAAE---------------CVGIALAAVTHVQVAR--------- 320

Query: 183 IKANILEEAFVPGGANMLQTLQGDNSDXXXXXXXXXXXXXXXXXXXXXREYSTEVREIRK 362
            +  +L+ A +PGG ++L+TLQG  +D                     R+Y+ E RE RK
Sbjct: 321 -EGTLLDAAEIPGGDSLLRTLQGSEADVTKVQSATEAAELAMKDLLSKRQYTAEQRENRK 379

Query: 363 KVRND 377
           ++RND
Sbjct: 380 RMRND 384


Top