BLASTX nr result
ID: Ephedra26_contig00020828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00020828
(942 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006484205.1| PREDICTED: pentatricopeptide repeat-containi... 112 2e-22
ref|XP_002887217.1| pentatricopeptide repeat-containing protein ... 112 3e-22
emb|CBI27289.3| unnamed protein product [Vitis vinifera] 111 3e-22
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi... 111 3e-22
ref|XP_006391068.1| hypothetical protein EUTSA_v10018264mg [Eutr... 111 5e-22
gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidop... 110 6e-22
ref|NP_177089.2| pentatricopeptide repeat-containing protein [Ar... 110 6e-22
ref|XP_006437925.1| hypothetical protein CICLE_v10033305mg [Citr... 110 8e-22
ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arab... 107 7e-21
ref|XP_006391035.1| hypothetical protein EUTSA_v10018238mg [Eutr... 106 1e-20
ref|XP_006301643.1| hypothetical protein CARUB_v10022087mg [Caps... 106 1e-20
gb|EOY01697.1| Pentatricopeptide repeat (PPR) superfamily protei... 104 4e-20
ref|NP_177062.1| pentatricopeptide repeat-containing protein [Ar... 104 6e-20
gb|EPS64873.1| hypothetical protein M569_09905 [Genlisea aurea] 103 7e-20
ref|XP_006301564.1| hypothetical protein CARUB_v10022000mg [Caps... 103 7e-20
ref|XP_004297237.1| PREDICTED: pentatricopeptide repeat-containi... 103 7e-20
gb|EMJ26324.1| hypothetical protein PRUPE_ppa002589mg [Prunus pe... 102 2e-19
ref|XP_002311339.1| pentatricopeptide repeat-containing family p... 101 4e-19
ref|XP_006354656.1| PREDICTED: pentatricopeptide repeat-containi... 100 6e-19
gb|ESW25515.1| hypothetical protein PHAVU_003G042400g [Phaseolus... 98 5e-18
>ref|XP_006484205.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Citrus sinensis]
Length = 666
Score = 112 bits (281), Expect = 2e-22
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Frame = +2
Query: 230 QSNGVPSTSENDPRASWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLI 409
++N S N+ +W +FKSL P+K + N+L+ + S H+LK+AFA V+
Sbjct: 76 ETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 135
Query: 410 ILEKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAE 589
++EK P LL+F T+ T+L ++ P +WG L I
Sbjct: 136 VIEKNP--KLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR 193
Query: 590 EKSTAFYAIEICLEICRKNMENLSECEHARRVAFNSFL-CACLNLDMVSQAEEMIQRSYA 766
+ S +++ E CR ++ + A N+ L C L VS AE++IQ
Sbjct: 194 KNSNFVAFLKVFEECCRIALDEKLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIQTMSV 253
Query: 767 LGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
LG+ PN SFG LA LYA GL + + LE +M +G + +Y+ L+ G++ G+
Sbjct: 254 LGVRPNESSFGFLAYLYALKGLQEKIVELESLMNEFGFSSQMVFYSSLISGYVKLGN 310
>ref|XP_002887217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333058|gb|EFH63476.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 623
Score = 112 bits (279), Expect = 3e-22
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 13/270 (4%)
Frame = +2
Query: 167 SLLKLIATVNTKPSISPFSNHQSNGVPSTSEN-----DPRASWITFKSLINEGHLPNKVL 331
SL + ++++ KPS + HQ + ST + D +W F+S LP+K L
Sbjct: 10 SLRRPFSSISRKPSPKTLTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPDKRL 69
Query: 332 VNALLIRVLS-------ESALHDLKKAFADVLIILEKYPHHNLLEFDTLETVLQNLTXXX 490
+N+L+ + S S H LK+AF ++EK P LLEF+T+ TVL+++
Sbjct: 70 LNSLITHLSSLHHADQNTSLRHRLKRAFVSTTYVIEKDPI--LLEFETIRTVLESMKLAK 127
Query: 491 XXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENLSECE 670
P +WG L+ I E + +++ E CR + +
Sbjct: 128 TSGPALALVECMFKNRYFVPFDLWGRLIIDICSETGSLAAFLKVFRESCRIAVYEKLDFM 187
Query: 671 HARRVAFNSFLCACL-NLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVA 847
VA N+ L AC L+ ++ AE++I+ LG+ P+ SFG LA LYA+ GL + ++
Sbjct: 188 KPDLVASNAALEACCWQLESLADAEDVIESMAVLGVKPDESSFGFLAYLYARKGLREKIS 247
Query: 848 SLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
+E+ M +G + + Y+ ++ G++ GD
Sbjct: 248 EIENSMDGFGFVSRRILYSNVISGYVKSGD 277
>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 111 bits (278), Expect = 3e-22
Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 2/289 (0%)
Frame = +2
Query: 77 RASSFACCEDSQAYRLLSNAYFSSHETPRYSLLKLIATVNTKPSISPFSNHQSNGV-PST 253
R SS + E Y L + FS P S + + KP SP + + S
Sbjct: 15 RFSSTSESEFPTLYSFLQPSLFSLKPIP--SAPRSPHPTSPKPLQSPAPEDLESALHTSL 72
Query: 254 SENDPRASWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEKYPHH 433
S N+ +W +FK+L P+K L N+L+ + S L++LK+AFA + +LEK P
Sbjct: 73 STNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYNLKRAFASAVFLLEKNP-- 130
Query: 434 NLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYA 613
+LL+F T+ T+L ++ P SMWG ++ +I +
Sbjct: 131 SLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWGGVIVEITRRNRSFVAF 190
Query: 614 IEICLEICRKNMENLSECEHARRVAFNSFLCACL-NLDMVSQAEEMIQRSYALGINPNVG 790
+ + E CR ++ E A N L C +L+ VS+AE++++ LGI P+
Sbjct: 191 LRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAEKVVEMMSVLGIQPDES 250
Query: 791 SFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
SFG LA LYA GL + + LE +MR +G ++ Y+ L+ ++ G+
Sbjct: 251 SFGFLAYLYALKGLEEKIVELEGLMRGFGFSSKKVIYSYLINAYVKSGN 299
>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
[Vitis vinifera]
Length = 655
Score = 111 bits (278), Expect = 3e-22
Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 2/289 (0%)
Frame = +2
Query: 77 RASSFACCEDSQAYRLLSNAYFSSHETPRYSLLKLIATVNTKPSISPFSNHQSNGV-PST 253
R SS + E Y L + FS P S + + KP SP + + S
Sbjct: 15 RFSSTSESEFPTLYSFLQPSLFSLKPIP--SAPRSPHPTSPKPLQSPAPEDLESALHTSL 72
Query: 254 SENDPRASWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEKYPHH 433
S N+ +W +FK+L P+K L N+L+ + S L++LK+AFA + +LEK P
Sbjct: 73 STNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYNLKRAFASAVFLLEKNP-- 130
Query: 434 NLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYA 613
+LL+F T+ T+L ++ P SMWG ++ +I +
Sbjct: 131 SLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWGGVIVEITRRNRSFVAF 190
Query: 614 IEICLEICRKNMENLSECEHARRVAFNSFLCACL-NLDMVSQAEEMIQRSYALGINPNVG 790
+ + E CR ++ E A N L C +L+ VS+AE++++ LGI P+
Sbjct: 191 LRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAEKVVEMMSVLGIQPDES 250
Query: 791 SFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
SFG LA LYA GL + + LE +MR +G ++ Y+ L+ ++ G+
Sbjct: 251 SFGFLAYLYALKGLEEKIVELEGLMRGFGFSSKKVIYSYLINAYVKSGN 299
>ref|XP_006391068.1| hypothetical protein EUTSA_v10018264mg [Eutrema salsugineum]
gi|557087502|gb|ESQ28354.1| hypothetical protein
EUTSA_v10018264mg [Eutrema salsugineum]
Length = 632
Score = 111 bits (277), Expect = 5e-22
Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 6/245 (2%)
Frame = +2
Query: 221 SNHQSNGVPSTSENDPRASWITFKSLINEGHLPNKVLVNALLIRVLS-----ESALHDLK 385
S+ +S+ S + +D +W F+S LP+K+L+N+L+ + S S H LK
Sbjct: 43 SSFESSLRHSLTAHDTDQAWKAFRSFAAASSLPDKLLLNSLITHMSSFHAGDTSLRHRLK 102
Query: 386 KAFADVLIILEKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWG 565
+AF ++EK P LLEF+TL T+L+++ P +WG
Sbjct: 103 RAFVSAAYVIEKDPI--LLEFETLRTLLESMKLAKAAAPALALVECMFKNRYFVPFDLWG 160
Query: 566 ALLEKIAEEKSTAFYAIEICLEICRKNMENLSECEHARRVAFNSFLCACL-NLDMVSQAE 742
L+ I E T +++ E CR +++ + VA N+ L AC ++ V+ AE
Sbjct: 161 HLIIDICRENGTLAAFLKVFRESCRISVDEKLDFMKPDLVASNAALEACCWQMESVADAE 220
Query: 743 EMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGH 922
+++ LG+ P+ SFG LA LYA+ GL + ++ LED M +G + Y+ ++ G+
Sbjct: 221 NVMESMAVLGVKPDESSFGFLAYLYARKGLREKISELEDAMDGFGFASRRILYSNMISGY 280
Query: 923 LT*GD 937
+ GD
Sbjct: 281 VKMGD 285
>gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana]
Length = 860
Score = 110 bits (276), Expect = 6e-22
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 24/295 (8%)
Frame = +2
Query: 125 LSNAYFSSH--ETPR-YSLLKLIA----TVNTKPSISPFSN------HQSNGVPSTSEND 265
+S +FSS E+P YS LK + PS+SP N Q + ST +
Sbjct: 211 ISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPSLSPPQNPKTLTPDQKSSFESTLHDS 270
Query: 266 PRA-----SWITFKSLINEGHLPNKVLVNALLIRVLS-----ESALHDLKKAFADVLIIL 415
A +W F+SL LP K L+N+L+ + ES H LK+AFA ++
Sbjct: 271 LNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLKRAFASAAYVI 330
Query: 416 EKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEK 595
EK P LLEF+T+ T+L+++ P +WG L+ I E
Sbjct: 331 EKDPI--LLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLVIDICREN 388
Query: 596 STAFYAIEICLEICRKNMENLSECEHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALG 772
+ +++ E CR +++ E VA N+ L AC ++ ++ AE +I+ LG
Sbjct: 389 GSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADAENVIESMAVLG 448
Query: 773 INPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
+ P+ SFG LA LYA+ GL + ++ LE++M +G + Y+ ++ G++ GD
Sbjct: 449 VKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGD 503
>ref|NP_177089.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806277|sp|P0C7R4.1|PP110_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g69290 gi|332196785|gb|AEE34906.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 110 bits (276), Expect = 6e-22
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 24/295 (8%)
Frame = +2
Query: 125 LSNAYFSSH--ETPR-YSLLKLIA----TVNTKPSISPFSN------HQSNGVPSTSEND 265
+S +FSS E+P YS LK + PS+SP N Q + ST +
Sbjct: 9 ISRRHFSSSSPESPSLYSFLKPSLFSHKPITLSPSLSPPQNPKTLTPDQKSSFESTLHDS 68
Query: 266 PRA-----SWITFKSLINEGHLPNKVLVNALLIRVLS-----ESALHDLKKAFADVLIIL 415
A +W F+SL LP K L+N+L+ + ES H LK+AFA ++
Sbjct: 69 LNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLKRAFASAAYVI 128
Query: 416 EKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEK 595
EK P LLEF+T+ T+L+++ P +WG L+ I E
Sbjct: 129 EKDPI--LLEFETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLVIDICREN 186
Query: 596 STAFYAIEICLEICRKNMENLSECEHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALG 772
+ +++ E CR +++ E VA N+ L AC ++ ++ AE +I+ LG
Sbjct: 187 GSLAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADAENVIESMAVLG 246
Query: 773 INPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
+ P+ SFG LA LYA+ GL + ++ LE++M +G + Y+ ++ G++ GD
Sbjct: 247 VKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGD 301
>ref|XP_006437925.1| hypothetical protein CICLE_v10033305mg [Citrus clementina]
gi|557540121|gb|ESR51165.1| hypothetical protein
CICLE_v10033305mg [Citrus clementina]
Length = 948
Score = 110 bits (275), Expect = 8e-22
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Frame = +2
Query: 230 QSNGVPSTSENDPRASWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLI 409
++N S N+ +W +FKSL P+K + N+L+ + S H+LK+AFA V+
Sbjct: 76 ETNLHKSLLTNNTDEAWKSFKSLTANSLFPSKPVTNSLIAHLSSLQDNHNLKRAFASVVY 135
Query: 410 ILEKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAE 589
++EK P LL+F T+ T+L ++ P +WG L I
Sbjct: 136 VIEKNP--KLLDFQTVHTLLGSMRNANTAAPAFALVKCMFKNRYFMPFELWGGFLVDICR 193
Query: 590 EKSTAFYAIEICLEICRKNMENLSECEHARRVAFNSFL-CACLNLDMVSQAEEMIQRSYA 766
+ S +++ E CR ++ + A N+ L C L VS AE++I+
Sbjct: 194 KNSNFVAFLKVFEECCRIALDEKLDFMKPNIYACNAALEGCCYGLQSVSDAEKVIETMSV 253
Query: 767 LGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
LG+ PN SFG LA LYA GL + V LE ++ +G + +Y+ L+ G++ G+
Sbjct: 254 LGVRPNESSFGFLAYLYALKGLQEKVVELESLINEFGFSSQMVFYSSLISGYVKLGN 310
>ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
lyrata] gi|297334553|gb|EFH64971.1| hypothetical protein
ARALYDRAFT_339164 [Arabidopsis lyrata subsp. lyrata]
Length = 1042
Score = 107 bits (267), Expect = 7e-21
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 24/296 (8%)
Frame = +2
Query: 122 LLSNAYFSSH--ETPR-YSLLK--LIAT--VNTKPSISPFSN------HQSNGVPST--- 253
++S +FSS E+P YS LK L + + PS+SP N Q + ST
Sbjct: 8 IISRRHFSSSSPESPSLYSFLKPSLFSNKPITLTPSLSPPQNLKTLTQEQKSSFESTLHD 67
Query: 254 --SENDPRASWITFKSLINEGHLPNKVLVNALLIRVLS-----ESALHDLKKAFADVLII 412
+ ++ +W F+SL LP K L+N+L+ + + E+ H LK+AFA +
Sbjct: 68 SLTTHNTDEAWKAFRSLTAASSLPEKRLINSLITHLSNTEESGENTAHRLKRAFASAAYV 127
Query: 413 LEKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEE 592
++K P LLEF+T+ T+++++ P +WG L+ I E
Sbjct: 128 IQKDPI--LLEFETVRTLMESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLIIDICRE 185
Query: 593 KSTAFYAIEICLEICRKNMENLSECEHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYAL 769
+ +++ E CR ++ + VA N+ L AC L+ ++ A+ +I+ L
Sbjct: 186 NGSLAAFLKVFKESCRIAVDEKLDFMKPDLVASNAALEACCRQLESLADADNVIESMAVL 245
Query: 770 GINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
G+ P+ SFG LA LYA+ GL + ++ LE++M +G + Y+ ++ G++ GD
Sbjct: 246 GVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGD 301
>ref|XP_006391035.1| hypothetical protein EUTSA_v10018238mg [Eutrema salsugineum]
gi|557087469|gb|ESQ28321.1| hypothetical protein
EUTSA_v10018238mg [Eutrema salsugineum]
Length = 661
Score = 106 bits (264), Expect = 1e-20
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 22/287 (7%)
Frame = +2
Query: 143 SSHETPR-YSLLK---LIATVNT-KPSISP------FSNHQSNGVPST-----SENDPRA 274
SS E+P YS LK NT PS+SP S Q + + S + ++
Sbjct: 17 SSPESPSLYSFLKPSLFSHKPNTLTPSLSPPQTPKTLSQDQRSSIESALHDSLASHNTDE 76
Query: 275 SWITFKSLINEGHLPNKVLVNALLIRVLS-----ESALHDLKKAFADVLIILEKYPHHNL 439
+W F+SL LP K LVN+L+ + E++ H LK+AFA ++EK P L
Sbjct: 77 AWKAFRSLTAASSLPEKRLVNSLITHLSGSCGDGENSSHRLKRAFASAAYVIEKDPI--L 134
Query: 440 LEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIE 619
LEF+T+ T+++++ P +WG L+ E T ++
Sbjct: 135 LEFETVRTLMESMKVAKAAAPALALVKCMFQNRYFVPFDLWGHLIIDSCRENGTLAAFLK 194
Query: 620 ICLEICRKNMENLSECEHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSF 796
+ E CR ++ + VA N+ L AC ++ ++ AE +I+ LG+ P+ SF
Sbjct: 195 VFRESCRIAVDEKLDFMKPDLVASNAALEACCRQMESLADAENVIESMAILGVKPDESSF 254
Query: 797 GLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
G LA LYA+ GL + ++ LE++M +G + Y+ ++ G++ GD
Sbjct: 255 GFLAYLYARKGLKEKISELENLMDGFGFESRRVLYSNMISGYVKMGD 301
>ref|XP_006301643.1| hypothetical protein CARUB_v10022087mg [Capsella rubella]
gi|482570353|gb|EOA34541.1| hypothetical protein
CARUB_v10022087mg [Capsella rubella]
Length = 658
Score = 106 bits (264), Expect = 1e-20
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Frame = +2
Query: 143 SSHETPR-YSLLKLIATVNTKPSISPFSNHQSNGVPSTSENDPRAS-------------- 277
SS E+P YS LK N +++P + N P T D +AS
Sbjct: 17 SSPESPSLYSFLKPSLFSNKPITLTPSLSPPQN--PKTLTQDQKASFESALHDSLTAQNT 74
Query: 278 ---WITFKSLINEGHLPNKVLVNALLIRVLS-----ESALHDLKKAFADVLIILEKYPHH 433
W F+SL LP K L+N+L+ + + E+ H LK+AFA ++EK P
Sbjct: 75 DEAWKAFRSLTAASSLPEKRLINSLITHLSNTEGSGENTSHRLKRAFASAAYVIEKDPI- 133
Query: 434 NLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYA 613
LLEF+T+ +VL+++ P +WG L+ I E +
Sbjct: 134 -LLEFETVRSVLESMKLAKASGPALALVKCMFKNRYFVPFDLWGHLIIDICRENGSLAAF 192
Query: 614 IEICLEICRKNMENLSECEHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVG 790
+++ E CR ++ + VA N+ L AC L+ ++ A+ +I+ LG+ P+
Sbjct: 193 LKVFKESCRIAVDEKLDFMKPDLVASNAALEACCRQLESLADADNVIESMAVLGVKPDES 252
Query: 791 SFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
SFG LA LYA+ G + ++ LE++M +G Y+ ++ G++ GD
Sbjct: 253 SFGFLAYLYARKGFREKISELENLMDGFGFASRGILYSNMISGYVKNGD 301
>gb|EOY01697.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 655
Score = 104 bits (260), Expect = 4e-20
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Frame = +2
Query: 275 SWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEKYPHHNLLEFDT 454
+W +FK+L PNK L N+L+ + S H+LK+AFA V+ ++EK P L F+T
Sbjct: 80 AWKSFKALTTNSIFPNKPLTNSLITYLSSLKDTHNLKRAFASVVFVIEKNPKS--LSFET 137
Query: 455 LETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEI 634
+ +VL+++ P +WG +L I+ + + + + E
Sbjct: 138 VTSVLRSMKIANTAAPAFALIKCMLKNRYFMPFVLWGDMLVDISRKNGSFVAFLRVFEEC 197
Query: 635 CRKNMENLSECEHARRVAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQ 811
CR ++ + A N+ L C C L VS AE++++ LG+ P+ SFG L+
Sbjct: 198 CRIAIDEKLDYMKPDLAACNAALECCCYELKSVSDAEKVVETMSVLGVRPDESSFGFLSY 257
Query: 812 LYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGH 922
LYA GL + + L+++M +G+ ++ Y+ L+ G+
Sbjct: 258 LYALKGLEEKIDELKNLMLEFGLSNKKMVYSSLIGGY 294
>ref|NP_177062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333630|sp|Q9CAA5.1|PP109_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g68980, mitochondrial; Flags: Precursor
gi|12323218|gb|AAG51590.1|AC011665_11 unknown protein
[Arabidopsis thaliana] gi|110740675|dbj|BAE98440.1|
hypothetical protein [Arabidopsis thaliana]
gi|332196751|gb|AEE34872.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 104 bits (259), Expect = 6e-20
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 13/270 (4%)
Frame = +2
Query: 167 SLLKLIATVNTKPSISPFSNHQSNGVPSTSEN-----DPRASWITFKSLINEGHLPNKVL 331
+L+ L ++ PS + HQ + ST + D +W F+S LP+K L
Sbjct: 7 TLISLRRPFSSIPS-KTLTPHQKSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPDKRL 65
Query: 332 VNALLIRVLS-------ESALHDLKKAFADVLIILEKYPHHNLLEFDTLETVLQNLTXXX 490
+N+L+ + S S H LK+AF ++EK P LLEF+T+ TVL+++
Sbjct: 66 LNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPI--LLEFETVRTVLESMKLAK 123
Query: 491 XXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENLSECE 670
P +WG LL + E + +++ E CR ++ +
Sbjct: 124 ASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIAVDEKLDFM 183
Query: 671 HARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVA 847
VA N+ L AC ++ ++ AE +I+ LG+ P+ SFG LA LYA+ GL + ++
Sbjct: 184 KPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGLREKIS 243
Query: 848 SLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
LED+M G + Y+ ++ G++ GD
Sbjct: 244 ELEDLMDGLGFASRRILYSSMISGYVKSGD 273
>gb|EPS64873.1| hypothetical protein M569_09905 [Genlisea aurea]
Length = 667
Score = 103 bits (258), Expect = 7e-20
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 27/300 (9%)
Frame = +2
Query: 122 LLSNAYFSSHE----TPRYSLLK--LIATVNTKPSISPFSNHQSNGVPSTSENDPRAS-- 277
LLS FSS TP YS LK L + ++ P S SN S+S + PR S
Sbjct: 9 LLSRRLFSSETEKKPTPLYSFLKPSLFSLTRSQQEPPPKSKRDSN---SSSSSPPRKSDL 65
Query: 278 ----------------WITFKSLINEG--HLPNKVLVNALLIRVLSESALHDLKKAFADV 403
W +F++L N G P+K L+N+++ + S + H+LK+A+A V
Sbjct: 66 EASIQQSLFNGHTDQAWKSFRALANGGPSSFPDKPLINSMITHLSSTNDAHNLKRAYASV 125
Query: 404 LIILEKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKI 583
+ LEK P + LEF T++++L ++ P MWG + +
Sbjct: 126 IFALEKNP--SSLEFSTVKSLLDSVKTAAPALALVKSMLSHRFF---MPFPMWGGAVLDL 180
Query: 584 AEEKSTAFYAIEICLEICRKNMENLSECEHARRVAFNSFLC-ACLNLDMVSQAEEMIQRS 760
+ + + + ++CR ++ + A N+ L C + + +AE++I+
Sbjct: 181 CRKNGSLSCFLGVFRQVCRISLVEKLDFMKPDLAACNAALHHCCREVGSIVEAEKVIESM 240
Query: 761 YALGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GDF 940
LGI P+ ++G LA LYA GLH + LE +M G+ E+ + L+ G + GDF
Sbjct: 241 SILGIKPDESTYGSLAYLYAFRGLHDKITDLEYLMDKLGVSNERPLFHNLICGFINCGDF 300
>ref|XP_006301564.1| hypothetical protein CARUB_v10022000mg [Capsella rubella]
gi|482570274|gb|EOA34462.1| hypothetical protein
CARUB_v10022000mg [Capsella rubella]
Length = 623
Score = 103 bits (258), Expect = 7e-20
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 13/269 (4%)
Frame = +2
Query: 170 LLKLIATVNTKPSISPFSNHQSNGVPSTSEN-----DPRASWITFKSLINEGHLPNKVLV 334
L + +++ KPS + HQ + ST + D +W F+S LP K L+
Sbjct: 11 LRRPFSSIPPKPSPKTLTPHQKSSFESTLHHSLIAHDTDQAWKVFRSFAAASSLPEKSLL 70
Query: 335 NALLIRVLSE-------SALHDLKKAFADVLIILEKYPHHNLLEFDTLETVLQNLTXXXX 493
N+L+ + S S H LK+AF ++EK P LL+F T+ TVL+++
Sbjct: 71 NSLITHLSSFNHADQNISRRHRLKRAFVSATYVIEKDPI--LLDFGTVLTVLESMKLAKA 128
Query: 494 XXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICRKNMENLSECEH 673
P +WG L+ I E T +++ E CR ++ +
Sbjct: 129 SGPALALVECMFKNRYFVPFDLWGHLIIDICRENGTLAAFLKVFKESCRIAVDENLDFMK 188
Query: 674 ARRVAFNSFLCACL-NLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLYAKLGLHKNVAS 850
VA N+ L AC L+ ++ AE +I+ LG+ P+ SFG LA L+A+ GL + ++
Sbjct: 189 PDLVASNAALEACCWQLESLADAEYVIESMAVLGVKPDESSFGFLAYLFARKGLQEKISE 248
Query: 851 LEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
LE+ M +G + Y+ ++ G++ GD
Sbjct: 249 LENSMDGFGFASRRILYSNMISGYVKSGD 277
>ref|XP_004297237.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like [Fragaria vesca subsp. vesca]
Length = 651
Score = 103 bits (258), Expect = 7e-20
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Frame = +2
Query: 275 SWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEKYPHHNLLEFDT 454
+W +FKSL P+K L N+++ + S +H+LK+AFA V+ ++EK P LLEF+T
Sbjct: 76 AWKSFKSLTGSSVFPSKSLTNSMITHLASLGEIHNLKRAFASVVYVVEKSPE--LLEFET 133
Query: 455 LETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEI 634
+ +VL + P S+WG+++ +I+ + + E
Sbjct: 134 VGSVLGAMNCANTAAPAFALIQCMFKNRFFLPFSVWGSVVVEISRRNGNFGAFLRVFEEN 193
Query: 635 CRKNMENLSECEHARRVAFNSFL--CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLA 808
CR +E E A N+ L C C L+ VS AE++++ LG+ P+ SFG LA
Sbjct: 194 CRVALEEKMEVMKPDLAACNAALEGCCC-ELESVSGAEKVVETMVGLGVRPDECSFGFLA 252
Query: 809 QLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*G 934
LYA GL + ++ LE +M +G + + L+ G++ G
Sbjct: 253 YLYALKGLGEKISELEGLMGGFGFSDRRVFRNNLINGYVKSG 294
>gb|EMJ26324.1| hypothetical protein PRUPE_ppa002589mg [Prunus persica]
Length = 655
Score = 102 bits (255), Expect = 2e-19
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Frame = +2
Query: 275 SWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEKYPHHNLLEFDT 454
+W +FK+L P+K L N+L+ + S +H+LK+AFA V+ ++EK P L+F+T
Sbjct: 80 AWKSFKTLTGSSAFPSKSLTNSLITHLSSLGDIHNLKRAFATVVYVVEKNP--GFLDFET 137
Query: 455 LETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEI 634
+ T+L + P S+WG +L +I+ + + + E
Sbjct: 138 VGTLLDAMKCANTAAPAFALIKSVFKNRFFLPFSVWGNVLIEISRKNGNFVAFLRVFEEN 197
Query: 635 CRKNMENLSECEHARRVAFNSFLCACLN-LDMVSQAEEMIQRSYALGINPNVGSFGLLAQ 811
CR ++ E A N+ L C L+ VS AE++++ LG+ P+ SFG LA
Sbjct: 198 CRIALDEKLESMKPDLAACNAALEGCCRELESVSDAEKVVETMAVLGVRPDESSFGFLAY 257
Query: 812 LYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*G 934
LYA GL + + LE +M +G ++ + + L+ G++ G
Sbjct: 258 LYALKGLEEKITELEGLMGGFGFSNKRVFQSNLINGYVKSG 298
>ref|XP_002311339.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222851159|gb|EEE88706.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 654
Score = 101 bits (252), Expect = 4e-19
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 5/295 (1%)
Frame = +2
Query: 71 MTRASSFACCEDSQAYRLLSNAYFSSHETPRYSLLKLIATVNTKPSI---SPFSNHQSNG 241
+ R S E Y L F+ +TP + T P I +N +S
Sbjct: 9 LRRRSFSTTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDHITNLESTL 68
Query: 242 VPSTSENDPRASWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEK 421
S N+ +W +FKSL + P+K L N+L+ + S + +LK+AFA ++ ++EK
Sbjct: 69 HKSLITNNTNEAWASFKSLTSNSAFPSKSLTNSLITHLSSLNDTINLKRAFASIVYVIEK 128
Query: 422 YPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKST 601
P L+F+T++ L ++ P +WG +L +I+ +
Sbjct: 129 NPKS--LDFETVQLFLGSMVRANTAAPAFALIKCMFKNRFFMPFRLWGDILIEISRKNDK 186
Query: 602 AFYAIEICLEICRKNMENLSECEHARRVAFNSFL--CACLNLDMVSQAEEMIQRSYALGI 775
+++ E CR ++ + A N L C C L+ VS+AE++I+ LGI
Sbjct: 187 VIAFLKVFEESCRIAIDEKLDFMKPDMDACNVALEGCCC-ELESVSEAEKVIETMSVLGI 245
Query: 776 NPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GDF 940
P+ SFG LA LYA G + L +M +G ++ +++ L+ G++ G F
Sbjct: 246 KPDELSFGFLAYLYALKGFQDKIIELNGLMSGFGFSNKKLFFSYLIRGYVKSGSF 300
>ref|XP_006354656.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g69290-like isoform X1 [Solanum tuberosum]
gi|565376327|ref|XP_006354657.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g69290-like isoform X2 [Solanum tuberosum]
Length = 654
Score = 100 bits (250), Expect = 6e-19
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Frame = +2
Query: 221 SNHQSNGVPSTSENDPRASWITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFAD 400
SN +S S N+ +W +FK+L N P+K L N+++ + S + H++K+AFA
Sbjct: 61 SNLESTLQDSIKSNNTDEAWKSFKTLSNYSAFPSKSLTNSVITHLSSLNDTHNIKRAFAS 120
Query: 401 VLIILEKYPHHNLLEFDTLETVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEK 580
V+ +LEK LL+ +T+ +L ++ P S+WG +L +
Sbjct: 121 VVFLLEK--KQELLKPETVHVLLNSMREANSAAPAFALVKCMFKNRFFIPFSLWGDVLVE 178
Query: 581 IAEEKSTAFYAIEICLEICRKNMENLSECEHARRVAFNSFL-CACLNLDMVSQAEEMIQR 757
I + +++ E CR ++ A N+ L C C ++ ++ AE++++
Sbjct: 179 ICRKNGNFGGFLQVFNENCRVAIDEKLNFLKPSLAACNAALECCCREVESITDAEKVVET 238
Query: 758 SYALGINPNVGSFGLLAQLYAKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHLT*GD 937
LG+ P+ SFGLLA LYA GL + +A LE ++ +G + + + L+ G + G+
Sbjct: 239 MSVLGVRPDECSFGLLAYLYALKGLKEKIAELEGLISGFGFPDKGVFLSNLISGFVKCGN 298
>gb|ESW25515.1| hypothetical protein PHAVU_003G042400g [Phaseolus vulgaris]
Length = 655
Score = 97.8 bits (242), Expect = 5e-18
Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Frame = +2
Query: 101 EDSQAYRLLSNAYFSSHETPRYSLLKLIATVNTKPSISPFSNHQSNGVPSTSENDPRASW 280
E Y L + F+ + + + + T S S S Q+ S ++ +W
Sbjct: 22 ETPTLYSFLQPSIFALTKNKQQPISEASPKAPTCLSTSQLSTLQTTLHKSLISSNTDEAW 81
Query: 281 ITFKSLINEGHLPNKVLVNALLIRVLSESALHDLKKAFADVLIILEKYPHHNLLEFDTLE 460
+FK+L P K L N+LL + S +LK+AFA L ++EK P LL+ DTL
Sbjct: 82 KSFKALTTHQAFPPKPLTNSLLSHLSSLGDTLNLKRAFASALFLMEKNPL--LLQHDTLH 139
Query: 461 TVLQNLTXXXXXXXXXXXXXXXXXXGSCPPISMWGALLEKIAEEKSTAFYAIEICLEICR 640
+L ++ P +WG +L +I+ + + + E CR
Sbjct: 140 HMLLSMKGANTAAPAFALVRSMLRFRFFVPFHIWGPVLVEISRDCGNLAAFLRLFEENCR 199
Query: 641 KNMENLSECEHARRVAFNSFL-CACLNLDMVSQAEEMIQRSYALGINPNVGSFGLLAQLY 817
+E E VA N+ L C L+ VS AE ++ LG+ P+ SFG L LY
Sbjct: 200 VALEERVEFMKPDVVACNAALEGCCFELESVSDAERVVGTMSNLGVRPDESSFGFLGYLY 259
Query: 818 AKLGLHKNVASLEDIMRLYGIIPEQQYYAGLVLGHL 925
A GL + + LE +M +G + ++ +Y L+ G++
Sbjct: 260 ALKGLEEKIRELEVLMGGFGCLNKKGFYCNLIRGYV 295