BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00020643
         (661 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637572.1| Pentatricopeptide repeat-containing protein ...    62   1e-07
ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
gb|ESW13450.1| hypothetical protein PHAVU_008G197200g [Phaseolus...    59   1e-06
ref|XP_006576933.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_006576932.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_006576930.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sat...    59   2e-06
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar...    59   2e-06
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
emb|CBI40338.3| unnamed protein product [Vitis vinifera]               57   4e-06
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]    57   4e-06
ref|XP_006652511.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06
ref|XP_002310674.2| hypothetical protein POPTR_0007s08080g [Popu...    56   8e-06
ref|XP_002332913.1| predicted protein [Populus trichocarpa]            56   8e-06
gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indi...    56   8e-06

>ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503507|gb|AES84710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 833

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGY 383
           GR+VHG  + SGL+ DV V  +L+++YA+ G +ED   VFE   +K+VV +N M TGY
Sbjct: 250 GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGY 307


>ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cicer arietinum]
          Length = 855

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 27/58 (46%), Positives = 40/58 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGY 383
           G++VHG  I +GL+ DV V  +L+++YA+ G +ED   VFE   +K+VV +N M TGY
Sbjct: 252 GKQVHGFGIRTGLVDDVFVGNALVDMYAKCGKMEDASKVFERMGFKDVVSWNAMVTGY 309


>gb|ESW13450.1| hypothetical protein PHAVU_008G197200g [Phaseolus vulgaris]
          Length = 863

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/58 (44%), Positives = 41/58 (70%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGY 383
           GR+VHG +I SGL+ DV V  +++++YA+ G +E+   VF+   +K+VV +N M TGY
Sbjct: 262 GREVHGFAIRSGLVDDVFVGNAVVDMYAKCGEVEEANKVFQRMVFKDVVSWNAMVTGY 319


>ref|XP_006576933.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X5 [Glycine max]
          Length = 376

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           GR +H L+I SGL  D+    +++++YAELG ++D   +FE  SY++ V++  M  GYLN
Sbjct: 130 GRLLHCLAIKSGLEGDLFFAPAILDMYAELGSLDDARKLFERYSYRSSVMWGFMIKGYLN 189

Query: 390 FSL 398
           FSL
Sbjct: 190 FSL 192


>ref|XP_006576932.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X4 [Glycine max]
          Length = 514

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           GR +H L+I SGL  D+    +++++YAELG ++D   +FE  SY++ V++  M  GYLN
Sbjct: 45  GRLLHCLAIKSGLEGDLFFAPAILDMYAELGSLDDARKLFERYSYRSSVMWGFMIKGYLN 104

Query: 390 FSL 398
           FSL
Sbjct: 105 FSL 107


>ref|XP_006576930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 546

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           GR +H L+I SGL  D+    +++++YAELG ++D   +FE  SY++ V++  M  GYLN
Sbjct: 77  GRLLHCLAIKSGLEGDLFFAPAILDMYAELGSLDDARKLFERYSYRSSVMWGFMIKGYLN 136

Query: 390 FSL 398
           FSL
Sbjct: 137 FSL 139


>ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 599

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           GR +H L+I SGL  D+    +++++YAELG ++D   +FE  SY++ V++  M  GYLN
Sbjct: 130 GRLLHCLAIKSGLEGDLFFAPAILDMYAELGSLDDARKLFERYSYRSSVMWGFMIKGYLN 189

Query: 390 FSL 398
           FSL
Sbjct: 190 FSL 192


>gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group] gi|125584837|gb|EAZ25501.1| hypothetical protein
           OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           GR  HG+ I  GL  DV    SL+  YA+LGL+ED E VF+    +++V +NTM  GY++
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVS 185

Query: 390 ---FSLIMTCY 413
               SL + C+
Sbjct: 186 NGLGSLALACF 196


>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098809|sp|O49619.1|PP350_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
           gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
           thaliana] gi|7270464|emb|CAB80230.1| putative protein
           [Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 804

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 40/59 (67%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYL 386
           G+K+H + I  G +SDV V  SLI+LY +LG   D E VFEE   +++V +N+M +GYL
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGY 383
           G++VHG ++ SGL  DV V  +++++YA+ G++E+   VFE    K+VV +N M TGY
Sbjct: 250 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGY 307


>emb|CBI40338.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGY 383
           G++VHG ++ SGL  DV V  +++++YA+ G++E+   VFE    K+VV +N M TGY
Sbjct: 250 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGY 307


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGY 383
           G++VHG ++ SGL  DV V  +++++YA+ G++E+   VFE    K+VV +N M TGY
Sbjct: 269 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGY 326


>ref|XP_006652511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Oryza brachyantha]
          Length = 1024

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/63 (39%), Positives = 42/63 (66%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           G+++H  ++  GL+++V V  SLINLYA+ G + D +  F+ S  KN+V++N M TG++ 
Sbjct: 344 GQQIHAAAVRHGLVANVFVGSSLINLYAKCGYLSDAKNAFDLSCEKNIVMWNAMLTGFVQ 403

Query: 390 FSL 398
             L
Sbjct: 404 NEL 406


>ref|XP_002310674.2| hypothetical protein POPTR_0007s08080g [Populus trichocarpa]
           gi|550334392|gb|EEE91124.2| hypothetical protein
           POPTR_0007s08080g [Populus trichocarpa]
          Length = 999

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           G +VHG  +  GL+SDV V  SL++LY   GL  D   VF+E  YKNVV +  +   Y++
Sbjct: 140 GVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVD 199

Query: 390 F---SLIMTCY 413
           +   S++M  Y
Sbjct: 200 YGEPSMVMNIY 210


>ref|XP_002332913.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           G +VHG  +  GL+SDV V  SL++LY   GL  D   VF+E  YKNVV +  +   Y++
Sbjct: 140 GVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVD 199

Query: 390 F---SLIMTCY 413
           +   S++M  Y
Sbjct: 200 YGEPSMVMNIY 210


>gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = +3

Query: 210 GRKVHGLSINSGLISDVVVIGSLINLYAELGLIEDVE*VFEESSYKNVVIYNTMQTGYLN 389
           GR  HG+ I  GL  DV    SL+  YA+LGL+ED E VF+    +++V +N M  GY++
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVS 185

Query: 390 ---FSLIMTCY 413
               SL + C+
Sbjct: 186 NGLGSLALACF 196