BLASTX nr result
ID: Ephedra26_contig00020382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00020382
(802 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [A... 383 e-104
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 364 2e-98
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 364 2e-98
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 359 5e-97
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 358 1e-96
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab... 356 5e-96
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 353 4e-95
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub... 353 5e-95
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 352 9e-95
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 352 1e-94
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus... 350 4e-94
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 348 1e-93
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub... 347 3e-93
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 347 4e-93
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz... 347 4e-93
ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [S... 347 4e-93
gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japo... 347 4e-93
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 347 4e-93
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 346 5e-93
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub... 346 5e-93
>ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
gi|548853779|gb|ERN11762.1| hypothetical protein
AMTR_s00022p00245030 [Amborella trichopoda]
Length = 1600
Score = 383 bits (984), Expect = e-104
Identities = 187/264 (70%), Positives = 224/264 (84%), Gaps = 7/264 (2%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
++ + W +LQ V+++ DS+ A+ KG+ +G+RQLLEKKEGLFRQNMMGKRVN+ACRSV
Sbjct: 317 KINDSWRDLQTNVDLLFDSDKASGKKGELESGIRQLLEKKEGLFRQNMMGKRVNFACRSV 376
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDP+LAVNEIGIPPYFA +LTYPEKVTPWN E+LRQA+ NGP ++PGAT + DEQG
Sbjct: 377 ISPDPFLAVNEIGIPPYFAKKLTYPEKVTPWNAERLRQAVLNGPEIHPGATLYHDEQGNT 436
Query: 411 DLSKIL-------PHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVL 253
+L+ L ++RNSIAKKLLST G S+ S + +SN EGKVVYRH+QDGD++
Sbjct: 437 NLADNLNDSKYKNENRRNSIAKKLLSTPGAVSTDVSGKGFNSN-FEGKVVYRHIQDGDIV 495
Query: 252 LVNRQPTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEA 73
LVNRQPTLHKPSMMAH+AR+LKGEKTLRMHYANCS+YNADFDGDEMNVHFPQDEI+RAEA
Sbjct: 496 LVNRQPTLHKPSMMAHVARILKGEKTLRMHYANCSSYNADFDGDEMNVHFPQDEIARAEA 555
Query: 72 YSIVNANKQYTVPTSGDPIRGLIQ 1
Y+IVNAN+QY VPTSG+PIRGLIQ
Sbjct: 556 YNIVNANEQYIVPTSGEPIRGLIQ 579
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 364 bits (935), Expect = 2e-98
Identities = 182/259 (70%), Positives = 213/259 (82%), Gaps = 2/259 (0%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDV-TGVRQLLEKKEGLFRQNMMGKRVNYACRS 595
++ +RW++LQ ++NV+ D TA +D +G+ QLLEKKEG+FRQ MMGKRVN+ACRS
Sbjct: 389 KIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRS 448
Query: 594 VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGM 415
VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWN KLR AI NGP ++PGATH+ D+
Sbjct: 449 VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLST 508
Query: 414 VDLSKILPHQRNSIAKKLLSTRGV-ASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQ 238
V L+ + R SI++KL S+RGV A G S +N + EGK+VYRHLQDGD++LVNRQ
Sbjct: 509 VKLA-VNKKMRISISRKLPSSRGVVAQPGRSSDN----EFEGKIVYRHLQDGDIVLVNRQ 563
Query: 237 PTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVN 58
PTLHKPS+MAH+ RVLKGEKTLRMHYANCS YNADFDGDEMNVHFPQDEISRAEAY+IVN
Sbjct: 564 PTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVN 623
Query: 57 ANKQYTVPTSGDPIRGLIQ 1
AN QY VP+ GDPIRGLIQ
Sbjct: 624 ANNQYIVPSRGDPIRGLIQ 642
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 364 bits (935), Expect = 2e-98
Identities = 182/259 (70%), Positives = 213/259 (82%), Gaps = 2/259 (0%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDV-TGVRQLLEKKEGLFRQNMMGKRVNYACRS 595
++ +RW++LQ ++NV+ D TA +D +G+ QLLEKKEG+FRQ MMGKRVN+ACRS
Sbjct: 460 KIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRS 519
Query: 594 VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGM 415
VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWN KLR AI NGP ++PGATH+ D+
Sbjct: 520 VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLST 579
Query: 414 VDLSKILPHQRNSIAKKLLSTRGV-ASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQ 238
V L+ + R SI++KL S+RGV A G S +N + EGK+VYRHLQDGD++LVNRQ
Sbjct: 580 VKLA-VNKKMRISISRKLPSSRGVVAQPGRSSDN----EFEGKIVYRHLQDGDIVLVNRQ 634
Query: 237 PTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVN 58
PTLHKPS+MAH+ RVLKGEKTLRMHYANCS YNADFDGDEMNVHFPQDEISRAEAY+IVN
Sbjct: 635 PTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVN 694
Query: 57 ANKQYTVPTSGDPIRGLIQ 1
AN QY VP+ GDPIRGLIQ
Sbjct: 695 ANNQYIVPSRGDPIRGLIQ 713
>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
gi|482559195|gb|EOA23386.1| hypothetical protein
CARUB_v10016563mg [Capsella rubella]
Length = 1651
Score = 359 bits (922), Expect = 5e-97
Identities = 177/257 (68%), Positives = 210/257 (81%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V +RW+NLQ++VNV+ DS A+ KD +G+ QLLEKKEGLFRQ MMGKRVN+ACRSV
Sbjct: 382 KVISRWMNLQESVNVLFDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSV 441
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPY+AVNEIGIPP FAL+L YPE+VTPWN EKLR+AI NGP V+PGATH+ D+ V
Sbjct: 442 ISPDPYIAVNEIGIPPCFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTV 501
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L + +R +IA KLLS+RG + +I+ EGKVVYR ++DGDV+LVNRQPT
Sbjct: 502 KLPSSVK-ERTAIANKLLSSRGATTELGKTCDIN---FEGKVVYRQMRDGDVVLVNRQPT 557
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPS+MAHI RVLKGEKTLR+HYANCS YNADFDGDEMNVHFPQDEISRAEAY+IVNAN
Sbjct: 558 LHKPSLMAHIVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 617
Query: 51 KQYTVPTSGDPIRGLIQ 1
QY P++GDP+R LIQ
Sbjct: 618 NQYARPSNGDPLRALIQ 634
>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
gi|557103957|gb|ESQ44311.1| hypothetical protein
EUTSA_v10005738mg [Eutrema salsugineum]
Length = 1697
Score = 358 bits (919), Expect = 1e-96
Identities = 176/259 (67%), Positives = 212/259 (81%), Gaps = 2/259 (0%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
++ +RW+NLQ++VNV+ DS TA K+ TG+ Q LEKKEGLFRQ MMGKRVN+ACRSV
Sbjct: 377 KIISRWMNLQESVNVLFDSKTATVKSQKEGTGICQTLEKKEGLFRQKMMGKRVNHACRSV 436
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDP++AVN+IGIPP FAL+LTYPE+VTPWN EKLR+AI NGP ++PGATH+ D+ V
Sbjct: 437 ISPDPFIAVNDIGIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDK---V 493
Query: 411 DLSKILPHQ--RNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQ 238
K+ P + R +IA+KL S+RGV T + EGKVVYRH+QDGDV+LVNRQ
Sbjct: 494 STMKLPPTRKARIAIARKLFSSRGVT---TELGKTCDVNFEGKVVYRHMQDGDVVLVNRQ 550
Query: 237 PTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVN 58
PTLHKPS+MAH+ RVLKGEKTLR+HYANCS YNADFDGDEMNVHFPQDEISRAEAY+IVN
Sbjct: 551 PTLHKPSIMAHMVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVN 610
Query: 57 ANKQYTVPTSGDPIRGLIQ 1
AN QY+ P++GDP+R LIQ
Sbjct: 611 ANNQYSRPSNGDPLRALIQ 629
>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
Length = 1678
Score = 356 bits (914), Expect = 5e-96
Identities = 172/257 (66%), Positives = 208/257 (80%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
++ +RW+NLQ++VNV+ DS TA ++ +G+ QLLEKKEGLFRQ MMGKRVN+ACRSV
Sbjct: 396 KIISRWMNLQESVNVLFDSKTATVQSQREGSGICQLLEKKEGLFRQKMMGKRVNHACRSV 455
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPY+AVN+IGIPP FAL+LTYPE+VTPWN EKLR+AI NGP ++PGATH+ D+ V
Sbjct: 456 ISPDPYIAVNDIGIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTV 515
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L R +IA+KLLS+RG T + EGK V+RH++DGDV+LVNRQPT
Sbjct: 516 KLPS-TEKARRAIARKLLSSRGAT---TELGKTCDINFEGKTVHRHMRDGDVVLVNRQPT 571
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPS+MAHI RVL+GEKTLR+HYANCS YNADFDGDEMNVHFPQDEISRAEAY+IVNAN
Sbjct: 572 LHKPSLMAHIVRVLRGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 631
Query: 51 KQYTVPTSGDPIRGLIQ 1
QY P++GDP+R LIQ
Sbjct: 632 NQYARPSNGDPLRALIQ 648
>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
Length = 1350
Score = 353 bits (906), Expect = 4e-95
Identities = 182/277 (65%), Positives = 212/277 (76%), Gaps = 20/277 (7%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDV-TGVRQLLEKKEGLFRQNMMGKRVNYACRS 595
++ +RW++LQ ++NV+ D TA +D +G+ QLLEKKEG+FRQ MMGKRVN+ACRS
Sbjct: 508 KIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRS 567
Query: 594 VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGM 415
VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWN KLR AI NGP ++PGATH+ D+
Sbjct: 568 VISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLST 627
Query: 414 VDLSKILPHQRNSIAKKLLSTRG-VASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQ 238
V L+ + R SI++KL S+RG VA G S N+ EGK+VYRHLQDGD++LVNRQ
Sbjct: 628 VKLA-VNKKMRISISRKLPSSRGVVAQPGRS----SDNEFEGKIVYRHLQDGDIVLVNRQ 682
Query: 237 PTLHKPSMMAHIARVLKGEKTLRMHYANC------------------SAYNADFDGDEMN 112
PTLHKPS+MAH+ RVLKGEKTLRMHYANC S YNADFDGDEMN
Sbjct: 683 PTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDDCSDSSTYNADFDGDEMN 742
Query: 111 VHFPQDEISRAEAYSIVNANKQYTVPTSGDPIRGLIQ 1
VHFPQDEISRAEAY+IVNAN QY VP+ GDPIRGLIQ
Sbjct: 743 VHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQ 779
>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1660
Score = 353 bits (905), Expect = 5e-95
Identities = 176/257 (68%), Positives = 207/257 (80%), Gaps = 1/257 (0%)
Frame = -2
Query: 768 VTNRWLNLQDAVNVVIDSNTANTMKGKD-VTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
V RW++LQ +VN++ D+ TA+ KD VTG+ QLLEKKEG+FRQ MMGKRVNYACRSV
Sbjct: 374 VLRRWMDLQRSVNLLFDNKTASGESQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSV 433
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPPYFALRLTYPE+VTPWN +LR AI NGP +PGAT + D+ +
Sbjct: 434 ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTL 493
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L + R+ +++L S+RGV + + N+ EGKVVYRHL+DGDV+LVNRQPT
Sbjct: 494 KLP-LDRRSRSLTSRRLQSSRGVIMHNGKIHD---NEFEGKVVYRHLKDGDVVLVNRQPT 549
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPS+MAH+ RVLKGEKT+RMHYANCS YNADFDGDE+NVHFPQDEISRAEAY+IVNAN
Sbjct: 550 LHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNAN 609
Query: 51 KQYTVPTSGDPIRGLIQ 1
QY PTSGDPIR LIQ
Sbjct: 610 NQYVKPTSGDPIRALIQ 626
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 352 bits (903), Expect = 9e-95
Identities = 176/256 (68%), Positives = 206/256 (80%)
Frame = -2
Query: 768 VTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSVI 589
V RW++LQ +VN++ D+ TA+ K VTG+ QLLEKKEG+FRQ MMGKRVNYACRSVI
Sbjct: 372 VLRRWMDLQRSVNLLFDNKTASGQKDL-VTGICQLLEKKEGIFRQKMMGKRVNYACRSVI 430
Query: 588 SPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMVD 409
SPDPYLAVNEIGIPPYFALRLTYPE+VTPWN +LR AI NGP +PGAT + D+ +
Sbjct: 431 SPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLK 490
Query: 408 LSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPTL 229
L + R+ ++KL S+RGV + + N+ EGKVVYRHL+DGDV+LVNRQPTL
Sbjct: 491 LP-LDRRSRSLTSRKLQSSRGVIMHNGKIHD---NEFEGKVVYRHLKDGDVVLVNRQPTL 546
Query: 228 HKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNANK 49
HKPS+MAH+ RVLKGEKT+RMHYANCS YNADFDGDE+NVHFPQDEISRAEAY+IVNAN
Sbjct: 547 HKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANN 606
Query: 48 QYTVPTSGDPIRGLIQ 1
QY PTSGDPIR LIQ
Sbjct: 607 QYVKPTSGDPIRALIQ 622
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
190K chain-like protein [Arabidopsis thaliana]
gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
[Arabidopsis thaliana]
Length = 1670
Score = 352 bits (902), Expect = 1e-94
Identities = 171/257 (66%), Positives = 205/257 (79%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V RW NLQ++VNV+ DS TA +D +G+ QLLEKKEGLFRQ MMGKRVN+ACRSV
Sbjct: 394 KVIFRWRNLQESVNVLFDSKTATVQSQRDSSGICQLLEKKEGLFRQKMMGKRVNHACRSV 453
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPY+AVN+IGIPP FAL+LTYPE+VTPWN EKLR+AI NGP ++PGATH+ D+ +
Sbjct: 454 ISPDPYIAVNDIGIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKSSTM 513
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L R +IA+KLLS+RG T + EGK V+RH++DGD++LVNRQPT
Sbjct: 514 KLPS-TEKARRAIARKLLSSRGAT---TELGKTCDINFEGKTVHRHMRDGDIVLVNRQPT 569
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPS+MAH RVLKGEKTLR+HYANCS YNADFDGDEMNVHFPQDEISRAEAY+IVNAN
Sbjct: 570 LHKPSLMAHKVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN 629
Query: 51 KQYTVPTSGDPIRGLIQ 1
QY P++G+P+R LIQ
Sbjct: 630 NQYARPSNGEPLRALIQ 646
>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 350 bits (897), Expect = 4e-94
Identities = 174/260 (66%), Positives = 209/260 (80%), Gaps = 3/260 (1%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V +RW++LQ +VN++ D+ T+ +G+ G+ QLLEKKEG+FRQ MMGKRVN+ACRSV
Sbjct: 369 KVLSRWMDLQQSVNLLFDNKTSG--QGEVAAGICQLLEKKEGIFRQKMMGKRVNFACRSV 426
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPPYFALRL+YPE+VTPWN LR AI NGP +PGATH+ D+Q V
Sbjct: 427 ISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATV 486
Query: 411 DL---SKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNR 241
L K+L + I++KL S+RGV + + + EGK+VYRHL+DGDV+LVNR
Sbjct: 487 KLPPNGKLL----SFISRKLPSSRGVILDHGKISD---QEFEGKIVYRHLKDGDVVLVNR 539
Query: 240 QPTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIV 61
QPTLHKPS+MAH+ RVLKGEKT+RMHYANCS YNADFDGDE+NVHFPQDEISRAEAY+IV
Sbjct: 540 QPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIV 599
Query: 60 NANKQYTVPTSGDPIRGLIQ 1
NAN QY PTSGDPIR LIQ
Sbjct: 600 NANNQYVKPTSGDPIRALIQ 619
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 348 bits (893), Expect = 1e-93
Identities = 177/260 (68%), Positives = 209/260 (80%), Gaps = 3/260 (1%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V +RW++LQ +VN++ D+ TA+ K TG+ QLLEKKEG+FRQ MMGKRVN+ACRSV
Sbjct: 380 KVLSRWMDLQQSVNMLFDNKTASG-KRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSV 438
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPPYFALRL+YPE+VTPWN KLR AI NGP +PGATH+ D+ +V
Sbjct: 439 ISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIV 498
Query: 411 DL---SKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNR 241
L K+L + ++KL ++RGV I ++ EGKVVYRHL+DGDV+LVNR
Sbjct: 499 KLPPKGKLL----SLTSRKLPTSRGVI---LHQGKISDHEFEGKVVYRHLKDGDVVLVNR 551
Query: 240 QPTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIV 61
QPTLHKPS+MAHI RVLKGEKT+RMHYANCS YNADFDGDE+NVHFPQDEISRAEAY+IV
Sbjct: 552 QPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIV 611
Query: 60 NANKQYTVPTSGDPIRGLIQ 1
NAN QY PTSGDPIR LIQ
Sbjct: 612 NANNQYVKPTSGDPIRALIQ 631
>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
italica]
Length = 1682
Score = 347 bits (890), Expect = 3e-93
Identities = 172/256 (67%), Positives = 200/256 (78%)
Frame = -2
Query: 768 VTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSVI 589
V RW++LQ +VNV+ DS+ K+ G+RQLLEKKEG+ RQ MMGKRVNYACRSVI
Sbjct: 401 VLRRWMDLQRSVNVLYDSSKGIVKSEKNAHGIRQLLEKKEGILRQKMMGKRVNYACRSVI 460
Query: 588 SPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMVD 409
SPDPYLAVNEIGIPP FA RLTYPEKVTPWN +KL++A+RNG ++PGATH+ D +
Sbjct: 461 SPDPYLAVNEIGIPPVFATRLTYPEKVTPWNAKKLQEAVRNGADIHPGATHYRDNSNIYK 520
Query: 408 LSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPTL 229
L + P +R +IAK L ++RG S N + E KVVYRHLQDGD++LVNRQPTL
Sbjct: 521 L-QAAPAKRRAIAKMLPASRGSISQPGKDPNCE---FESKVVYRHLQDGDIVLVNRQPTL 576
Query: 228 HKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNANK 49
HKPSMMAH RVL GEKT+RMHYANCS YNADFDGDEMNVHFPQDEISRAEA +IV+ANK
Sbjct: 577 HKPSMMAHFVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVDANK 636
Query: 48 QYTVPTSGDPIRGLIQ 1
QY P SGD +RGLIQ
Sbjct: 637 QYIGPRSGDAVRGLIQ 652
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 347 bits (889), Expect = 4e-93
Identities = 173/259 (66%), Positives = 207/259 (79%), Gaps = 3/259 (1%)
Frame = -2
Query: 768 VTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSVI 589
+ RW+NLQ +VNV+ D A + +G+ QLLEKKEGLFRQ +MGKRVNYACRSVI
Sbjct: 400 IVTRWMNLQQSVNVLFDGKNAAGQRDM-ASGICQLLEKKEGLFRQKLMGKRVNYACRSVI 458
Query: 588 SPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMVD 409
SPDPYLAVNEIGIPPYFALRLTYPE+VTPWN KLR +I NG ++PGATH+ D+ +
Sbjct: 459 SPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDK---LS 515
Query: 408 LSKILPHQ--RNSIAKKLLSTRG-VASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQ 238
++ P++ R SIA+KL ++RG + G +N + EGK+VYRHLQDGDV+LVNRQ
Sbjct: 516 TMRLPPNKKMRISIARKLDTSRGAIVQPGKDSDN----EFEGKIVYRHLQDGDVVLVNRQ 571
Query: 237 PTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVN 58
PTLHKPS+MAH+ RVLKGEKTLRMHYANCS YNADFDGDEMNVHFPQDE+SRAEAY+IVN
Sbjct: 572 PTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVN 631
Query: 57 ANKQYTVPTSGDPIRGLIQ 1
AN QY P++GDP+R LIQ
Sbjct: 632 ANNQYVRPSNGDPLRSLIQ 650
>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
Group]
Length = 1748
Score = 347 bits (889), Expect = 4e-93
Identities = 173/257 (67%), Positives = 199/257 (77%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V RW++LQ VNV+ DS+ + K+ G+RQLLEKKEG+ RQ MMGKRVNYACRSV
Sbjct: 390 EVLRRWMDLQRNVNVLYDSSKGLSKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSV 449
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPP FA RLTYPEKVTPWN KL++AI NG ++PGATH+ D M
Sbjct: 450 ISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMY 509
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L + P +R +IAK L ++RG S + E KVVYRHLQDGDV+LVNRQPT
Sbjct: 510 KL-QAAPPKRRAIAKMLPASRGSISQPGKDPKCE---FESKVVYRHLQDGDVVLVNRQPT 565
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPSMMAH+ RVL GEKT+RMHYANCS YNADFDGDEMNVHFPQDEISRAEA +IV+AN
Sbjct: 566 LHKPSMMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 625
Query: 51 KQYTVPTSGDPIRGLIQ 1
KQY P SGD +RGLIQ
Sbjct: 626 KQYIGPRSGDAVRGLIQ 642
>ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [Sorghum bicolor]
gi|241945458|gb|EES18603.1| hypothetical protein
SORBIDRAFT_09g027223 [Sorghum bicolor]
Length = 799
Score = 347 bits (889), Expect = 4e-93
Identities = 172/256 (67%), Positives = 200/256 (78%)
Frame = -2
Query: 768 VTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSVI 589
V RW++LQ +VNV+ DS+ K+ G+RQLLEKKEG+ RQ MMGKRVNYACRSVI
Sbjct: 385 VIRRWMDLQRSVNVLYDSSKGLVKSEKNAHGIRQLLEKKEGILRQKMMGKRVNYACRSVI 444
Query: 588 SPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMVD 409
SPDPYLAVNEIGIPP FA RLTYPEKVTPWN +KL++AIRNG ++PGATH+ D+
Sbjct: 445 SPDPYLAVNEIGIPPVFATRLTYPEKVTPWNTKKLQEAIRNGADIHPGATHYRDKNNTYK 504
Query: 408 LSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPTL 229
L + P +R+S+AK L ++RG N + E KVVYRHLQDGD++LVNRQPTL
Sbjct: 505 LQAV-PAKRHSVAKMLPASRGSICQPGRDPNCE---FESKVVYRHLQDGDIVLVNRQPTL 560
Query: 228 HKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNANK 49
HKPSMMAH RVL GE+TLRMHYANCS YNADFDGDEMNVHFPQDEISRAEA +IV+ANK
Sbjct: 561 HKPSMMAHFVRVLPGERTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVDANK 620
Query: 48 QYTVPTSGDPIRGLIQ 1
QY P SGD +RGLIQ
Sbjct: 621 QYIGPRSGDAVRGLIQ 636
>gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japonica Group]
Length = 994
Score = 347 bits (889), Expect = 4e-93
Identities = 173/257 (67%), Positives = 199/257 (77%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V RW++LQ VNV+ DS+ + K+ G+RQLLEKKEG+ RQ MMGKRVNYACRSV
Sbjct: 172 EVLRRWMDLQRNVNVLYDSSKGLSKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSV 231
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPP FA RLTYPEKVTPWN KL++AI NG ++PGATH+ D M
Sbjct: 232 ISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMY 291
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L + P +R +IAK L ++RG S + E KVVYRHLQDGDV+LVNRQPT
Sbjct: 292 KL-QAAPPKRRAIAKMLPASRGSISQPGKDPKCE---FESKVVYRHLQDGDVVLVNRQPT 347
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPSMMAH+ RVL GEKT+RMHYANCS YNADFDGDEMNVHFPQDEISRAEA +IV+AN
Sbjct: 348 LHKPSMMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 407
Query: 51 KQYTVPTSGDPIRGLIQ 1
KQY P SGD +RGLIQ
Sbjct: 408 KQYIGPRSGDAVRGLIQ 424
>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1628
Score = 347 bits (889), Expect = 4e-93
Identities = 172/264 (65%), Positives = 207/264 (78%)
Frame = -2
Query: 792 KTQGYVFQVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRV 613
+T+ + + RW +LQ +VN++ D+ T+ + KD +G+ QLL+KKEG+FRQ MMGKRV
Sbjct: 356 RTKSDAYYILRRWQDLQGSVNLLFDNKTSLRSQ-KDASGICQLLDKKEGIFRQKMMGKRV 414
Query: 612 NYACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHF 433
NYACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWN KL AI NGP +PGA +
Sbjct: 415 NYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILY 474
Query: 432 EDEQGMVDLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVL 253
D+ + L K R+S +++L S+RGV + ++ EGKVVYRHL+DGDV+
Sbjct: 475 TDKTSTLRLQKD-KSLRSSTSRRLQSSRGVIMHHGKIHE---HEFEGKVVYRHLKDGDVV 530
Query: 252 LVNRQPTLHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEA 73
LVNRQPTLHKPS+MAH+ RVLKGEKT+RMHYANCS YNADFDGDE+NVHFPQDEISRAEA
Sbjct: 531 LVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEA 590
Query: 72 YSIVNANKQYTVPTSGDPIRGLIQ 1
Y+IVNAN QY PTSGDPIR LIQ
Sbjct: 591 YNIVNANNQYVKPTSGDPIRALIQ 614
>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
Length = 1770
Score = 346 bits (888), Expect = 5e-93
Identities = 171/257 (66%), Positives = 202/257 (78%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
++ RW++LQ +VNV+ DS T+ + G+ QLLEKKEG+FRQ MMGKRVN+ACRSV
Sbjct: 327 KIVRRWMDLQQSVNVMFDSKTSTGQRNV-APGICQLLEKKEGIFRQKMMGKRVNFACRSV 385
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPPYFALRLTYPE+VTPWN KLR AI NGP +PGATH+ D+ V
Sbjct: 386 ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDAIINGPETHPGATHYVDKLSTV 445
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L + R S ++KL S+RGV + +S EGK+V+RHLQDGD++LVNRQPT
Sbjct: 446 KLP-LNRKARISASRKLPSSRGVVMQNGKTYDYES---EGKIVHRHLQDGDIVLVNRQPT 501
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPS+MAH+ RVLKGEKT+RMHYANCS YNADFDGDEMNVH PQDEISRAE Y+I+NAN
Sbjct: 502 LHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHLPQDEISRAEGYNILNAN 561
Query: 51 KQYTVPTSGDPIRGLIQ 1
QY PTSG+PIR LIQ
Sbjct: 562 NQYVKPTSGEPIRALIQ 578
>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
brachyantha]
Length = 1755
Score = 346 bits (888), Expect = 5e-93
Identities = 172/257 (66%), Positives = 198/257 (77%)
Frame = -2
Query: 771 QVTNRWLNLQDAVNVVIDSNTANTMKGKDVTGVRQLLEKKEGLFRQNMMGKRVNYACRSV 592
+V RW+++Q +VNV+ DS+ K+ G+RQLLEKKEG+ RQ MMGKRVNYACRSV
Sbjct: 382 EVLRRWMDMQRSVNVLYDSSKGLAKNEKNANGIRQLLEKKEGILRQKMMGKRVNYACRSV 441
Query: 591 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNEEKLRQAIRNGPHVYPGATHFEDEQGMV 412
ISPDPYLAVNEIGIPP FA RLTYPEKVTPWN KL++AI NG ++PGATH+ D M
Sbjct: 442 ISPDPYLAVNEIGIPPVFATRLTYPEKVTPWNARKLQEAINNGADIHPGATHYRDNNNMY 501
Query: 411 DLSKILPHQRNSIAKKLLSTRGVASSGTSVENIDSNKVEGKVVYRHLQDGDVLLVNRQPT 232
L + P +R +IAK L ++RG S + E KVVYRHLQDGDV+LVNRQPT
Sbjct: 502 KL-QAAPAKRRAIAKMLPASRGSISQAGKDPKCE---FESKVVYRHLQDGDVVLVNRQPT 557
Query: 231 LHKPSMMAHIARVLKGEKTLRMHYANCSAYNADFDGDEMNVHFPQDEISRAEAYSIVNAN 52
LHKPSMMAH RVL GEKT+RMHYANCS YNADFDGDEMNVHFPQDEISRAEA +IV+AN
Sbjct: 558 LHKPSMMAHFVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDAN 617
Query: 51 KQYTVPTSGDPIRGLIQ 1
KQY P SGD +RGLIQ
Sbjct: 618 KQYIGPRSGDAVRGLIQ 634