BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00020173
         (1385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16130.1| unknown [Picea sitchensis]                             621   e-175
ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis] ...   570   e-160
dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]                         568   e-159
gb|EEC72708.1| hypothetical protein OsI_06300 [Oryza sativa Indi...   567   e-159
gb|EXB33246.1| (6-4)DNA photolyase [Morus notabilis]                  566   e-159
ref|XP_004158807.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis...   565   e-158
ref|XP_006406944.1| hypothetical protein EUTSA_v10020425mg [Eutr...   565   e-158
ref|NP_001046243.2| Os02g0204400 [Oryza sativa Japonica Group] g...   564   e-158
gb|EEE56527.1| hypothetical protein OsJ_05816 [Oryza sativa Japo...   564   e-158
ref|XP_006385492.1| hypothetical protein POPTR_0003s05870g [Popu...   563   e-158
ref|XP_002304163.2| hypothetical protein POPTR_0003s05870g [Popu...   563   e-158
ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana] gi|3...   563   e-158
pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312...   563   e-158
ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]   562   e-157
ref|XP_002451747.1| hypothetical protein SORBIDRAFT_04g007140 [S...   562   e-157
emb|CBI36257.3| unnamed protein product [Vitis vinifera]              562   e-157
ref|XP_006647054.1| PREDICTED: LOW QUALITY PROTEIN: (6-4)DNA pho...   562   e-157
ref|XP_004951515.1| PREDICTED: (6-4)DNA photolyase-like isoform ...   561   e-157
ref|XP_006465388.1| PREDICTED: (6-4)DNA photolyase-like [Citrus ...   560   e-157
ref|XP_006585645.1| PREDICTED: (6-4)DNA photolyase-like isoform ...   560   e-157

>gb|ABR16130.1| unknown [Picea sitchensis]
          Length = 431

 Score =  621 bits (1601), Expect = e-175
 Identities = 286/381 (75%), Positives = 331/381 (86%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLGCMLTPTL 1204
            ISHTIF+P EII+KNGGKPPLTYQSF+KLIGLP   +GNG   IP    D+   +  PTL
Sbjct: 30   ISHTIFSPEEIIKKNGGKPPLTYQSFIKLIGLPPLPLGNGSPSIPPVGIDNSNDLPIPTL 89

Query: 1203 EELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTVLSP 1024
             +LGF DVSQEE +PFIGGETEALKR+++S+QDQKWV+ FEKPKGDP+AFLKPATTVLSP
Sbjct: 90   TDLGFGDVSQEECNPFIGGETEALKRMDASIQDQKWVAAFEKPKGDPTAFLKPATTVLSP 149

Query: 1023 YLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRMKENA 847
            YLKFGCLS+RLFYQRL+E+Y+K K HT+PPVSLEGQLLWREFFYTVA+GTP FD+M+ N 
Sbjct: 150  YLKFGCLSSRLFYQRLQEVYRKVKKHTEPPVSLEGQLLWREFFYTVAYGTPKFDQMEGNP 209

Query: 846  ICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFLH 667
            ICKQIPW DD+ LLSAWRD +TGYPWIDA+M+QLRKWGWMHHLARH+VACFLTRGDLF+H
Sbjct: 210  ICKQIPWNDDDSLLSAWRDGQTGYPWIDAVMVQLRKWGWMHHLARHAVACFLTRGDLFVH 269

Query: 666  WEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIRHFL 487
            WEKGRDVFDRLLIDSDWA+NN+NWMWLSCSAFFSQYHRIYSPI+FGKKYDPDGK++R+FL
Sbjct: 270  WEKGRDVFDRLLIDSDWAINNSNWMWLSCSAFFSQYHRIYSPISFGKKYDPDGKYVRYFL 329

Query: 486  PVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYASGKQ 307
            PVLKDMP +YIYEPWTAPI+VQ KAKCIIG DYP+P+V HL ASK CK+ ++AAYA  KQ
Sbjct: 330  PVLKDMPKEYIYEPWTAPIDVQRKAKCIIGKDYPEPLVSHLGASKNCKEKIAAAYALNKQ 389

Query: 306  SNEKRKTTKVSNVVSKSEKNR 244
               +R   ++  V   S  +R
Sbjct: 390  IKGERNQVQLQGVKKNSSDSR 410


>ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis]
            gi|223543206|gb|EEF44738.1| DNA photolyase, putative
            [Ricinus communis]
          Length = 537

 Score =  570 bits (1469), Expect = e-160
 Identities = 266/385 (69%), Positives = 321/385 (83%), Gaps = 5/385 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTES-DDLG-CMLT- 1213
            +SHT+FNP +IIQKNGGKPPL+YQSFLK+ G PS +    P  I S     D+G C ++ 
Sbjct: 140  VSHTLFNPADIIQKNGGKPPLSYQSFLKVAGQPSWASSPLPTTISSLPPVGDVGSCEISE 199

Query: 1212 -PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATT 1036
             PTLEELG+ DV Q+E++PF GGE+EALKRL   + +++WV+ FEKPKGDPSAF+KPATT
Sbjct: 200  VPTLEELGYGDVEQDEWAPFRGGESEALKRLREKITNKEWVANFEKPKGDPSAFMKPATT 259

Query: 1035 VLSPYLKFGCLSARLFYQRLKEIYKKA-KHTQPPVSLEGQLLWREFFYTVAFGTPNFDRM 859
            VLSPYLKFGCLS+R FYQ L+++YK   KHT PPVSL GQLLWR+FFYTVAFGTPNFD+M
Sbjct: 260  VLSPYLKFGCLSSRYFYQCLQDVYKNVGKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDQM 319

Query: 858  KENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD 679
            KEN ICKQIPW +D+ LLSAWR+A+TGYPWIDAIM+QLRKWGWMHHLARH VACFLTRGD
Sbjct: 320  KENRICKQIPWNEDDELLSAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTRGD 379

Query: 678  LFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFI 499
            LF+HWEKGR+VF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G +I
Sbjct: 380  LFVHWEKGRNVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGNYI 439

Query: 498  RHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYA 319
            +HFLPVLKDMP +YIYEPWTAP+ VQ KAKCIIG DYPKPVV H  ASK+CKK ++ +YA
Sbjct: 440  KHFLPVLKDMPKEYIYEPWTAPLSVQTKAKCIIGRDYPKPVVAHDSASKECKKKLAESYA 499

Query: 318  SGKQSNEKRKTTKVSNVVSKSEKNR 244
              ++ N K     + N+  K E+++
Sbjct: 500  LNQKLNGKLGEEDLRNLRRKLEQDQ 524


>dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]
          Length = 536

 Score =  568 bits (1464), Expect = e-159
 Identities = 262/393 (66%), Positives = 324/393 (82%), Gaps = 7/393 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLG----CML 1216
            +SHT+FNP +IIQKNGGKPPLTYQSFLK+ G   PS  + PL I  +    +G    C +
Sbjct: 139  VSHTLFNPADIIQKNGGKPPLTYQSFLKVAG--EPSWASSPLSISISSLPPVGDVGSCEI 196

Query: 1215 T--PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPA 1042
            +  PT+EELG+ DV Q+E++PF GGE+EALK L  S++D++W++ FEKPKGDPSAF+KPA
Sbjct: 197  SEVPTVEELGYGDVEQDEWTPFRGGESEALKSLRESIKDKEWIANFEKPKGDPSAFVKPA 256

Query: 1041 TTVLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFD 865
            TTVLSPYLKFGCLS+R F+Q L+++Y+  K HT PPVSL GQLLWR+FFYTVAFGTPNFD
Sbjct: 257  TTVLSPYLKFGCLSSRYFFQCLQDVYRNVKKHTSPPVSLVGQLLWRDFFYTVAFGTPNFD 316

Query: 864  RMKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTR 685
            +MK+N ICKQIPW +D  LL+AWRDA+TGYPWIDAIM+QLRKWGWMHHLARH VACFLTR
Sbjct: 317  QMKDNRICKQIPWNEDTELLAAWRDARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTR 376

Query: 684  GDLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGK 505
            GDLF+HWEKGRDVF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G 
Sbjct: 377  GDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGN 436

Query: 504  FIRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAA 325
            +IRHFLPVLKDMP ++IYEPWTAP+ VQ KAKCIIG DYPKPVV H  ASK+CK+ ++ A
Sbjct: 437  YIRHFLPVLKDMPKEFIYEPWTAPLSVQTKAKCIIGRDYPKPVVSHDSASKECKRKLAEA 496

Query: 324  YASGKQSNEKRKTTKVSNVVSKSEKNRISFKKL 226
            YA  ++ N +     + N+  K ++++   +K+
Sbjct: 497  YALNQKLNGQLTEEDLGNLKRKLQQDQDQERKI 529


>gb|EEC72708.1| hypothetical protein OsI_06300 [Oryza sativa Indica Group]
          Length = 551

 Score =  567 bits (1462), Expect = e-159
 Identities = 259/373 (69%), Positives = 307/373 (82%), Gaps = 2/373 (0%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLP-SPSIGNGPLLIPSTESDDLGCMLTPT 1207
            +SHT+F+P EII+KNGG+PP+TYQSF+ + G P  P +     L P  ++ +   +  P 
Sbjct: 153  VSHTLFDPAEIIEKNGGRPPMTYQSFVAIAGEPPEPIMEEYSELPPVGDTGEYELLPVPR 212

Query: 1206 LEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTVLS 1027
            +EELG+ D+SQE+ SPF GGETEALKR+  SL D++WV++FEKPKGDPSAFLKPATTVLS
Sbjct: 213  VEELGYGDISQEDLSPFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLS 272

Query: 1026 PYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRMKEN 850
            PYLKFGCLS+R FY  ++++Y+  K HT PPVSL GQLLWR+FFYTVAFGTPNFD+MK N
Sbjct: 273  PYLKFGCLSSRYFYHCIQDVYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGN 332

Query: 849  AICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFL 670
             ICKQIPW ++E L  AWRD +TGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLF+
Sbjct: 333  KICKQIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFI 392

Query: 669  HWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIRHF 490
            HWEKGRDVF+RLLIDSDWA+NN NWMWLSCS+FF QYHRIYSP +FGKKYDP+G +IRHF
Sbjct: 393  HWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYIRHF 452

Query: 489  LPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYASGK 310
            +PVLKDMP +YIYEPWTAP+ +Q KA CIIG DYPKPVV H  ASK+CKK M  AYAS +
Sbjct: 453  IPVLKDMPKEYIYEPWTAPLSIQKKANCIIGKDYPKPVVDHAIASKECKKMMGEAYASNR 512

Query: 309  QSNEKRKTTKVSN 271
              ++K    K SN
Sbjct: 513  LDDDKPDKGKSSN 525


>gb|EXB33246.1| (6-4)DNA photolyase [Morus notabilis]
          Length = 535

 Score =  566 bits (1459), Expect = e-159
 Identities = 269/393 (68%), Positives = 317/393 (80%), Gaps = 6/393 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQK-NGGKPPLTYQSFLKLIGLP----SPSIGNGPLLIPSTESDDLGCM 1219
            +SHT+F+P +IIQK NGGKPPL+YQSFLKL G P    S  I     L P  E  +    
Sbjct: 139  VSHTLFDPADIIQKKNGGKPPLSYQSFLKLAGKPAWASSQLITTLSSLPPVGEFGNCEIF 198

Query: 1218 LTPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPAT 1039
              PT+EELG+ED  Q+EF+PF GGE+EALKRL  S+ D++WV+ FEKPKGDPSAFLKPAT
Sbjct: 199  EVPTVEELGYEDPGQDEFTPFRGGESEALKRLKDSISDKEWVANFEKPKGDPSAFLKPAT 258

Query: 1038 TVLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDR 862
            TVLSPYLKFGCLS+R FYQ L+++YK  K HT PPVSL GQLLWR+FFYTVAFGTPNFD+
Sbjct: 259  TVLSPYLKFGCLSSRYFYQCLQDVYKNVKKHTSPPVSLVGQLLWRDFFYTVAFGTPNFDQ 318

Query: 861  MKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRG 682
            MK N ICKQIPW D+E LL+AWRDAKTGYPWIDAIM+QLRKWGWMHHLARH VACFLTRG
Sbjct: 319  MKINRICKQIPWNDNEELLTAWRDAKTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTRG 378

Query: 681  DLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKF 502
            DLF+HWEKGR VF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G +
Sbjct: 379  DLFVHWEKGRHVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGNY 438

Query: 501  IRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAY 322
            IRHFLPVLKDMP +YIYEPWTAP+ VQ KAKCIIG DYP+PVV H  ASK+CK+ M  AY
Sbjct: 439  IRHFLPVLKDMPKEYIYEPWTAPLSVQTKAKCIIGKDYPRPVVSHDSASKECKRRMGEAY 498

Query: 321  ASGKQSNEKRKTTKVSNVVSKSEKNRISFKKLK 223
            A  ++ N K     ++++  + E+++    K K
Sbjct: 499  ALNQRLNGKVSDDDLNSLRRRLEEDQNQEVKAK 531


>ref|XP_004158807.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
          Length = 544

 Score =  565 bits (1457), Expect = e-158
 Identities = 267/395 (67%), Positives = 315/395 (79%), Gaps = 10/395 (2%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPS----PSIGNGPLLIPSTESDDLGCML 1216
            +SHT+FNP +IIQKNGG PPL+YQSFLKL G PS    P       L P  ++       
Sbjct: 139  VSHTLFNPADIIQKNGGSPPLSYQSFLKLAGEPSWACAPLSTTVSSLPPVGDTGRSEISD 198

Query: 1215 TPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATT 1036
             PT+++LG+ED+++++++PF GGETEALKRL  S+ ++ WV++FEKPKGDPSAFLKPATT
Sbjct: 199  VPTIKDLGYEDMAKDDWTPFRGGETEALKRLKESMSNKDWVAKFEKPKGDPSAFLKPATT 258

Query: 1035 VLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRM 859
            VLSPYLKFGCLS+R FYQ ++EIYK  K HT PPVSL GQLLWREFFYT AFGTPNFDRM
Sbjct: 259  VLSPYLKFGCLSSRYFYQCIQEIYKNVKGHTSPPVSLVGQLLWREFFYTAAFGTPNFDRM 318

Query: 858  KENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD 679
            K+N ICKQIPW DD  LL+AWRDA+TG+PWIDAIM+QLRKWGWMHHLARH VACFLTRGD
Sbjct: 319  KDNKICKQIPWNDDNELLAAWRDARTGFPWIDAIMVQLRKWGWMHHLARHCVACFLTRGD 378

Query: 678  LFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFI 499
            LF+HWEKGRDVF+RLLIDSDWA+NNANW+WLSCS+FF QY+R+YSPITFGKKYDP+G FI
Sbjct: 379  LFVHWEKGRDVFERLLIDSDWAINNANWLWLSCSSFFYQYNRVYSPITFGKKYDPNGDFI 438

Query: 498  RHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYA 319
            RHFLPVLKDMP QYIYEPWTAP+ +Q KAKCIIG DYPKPVV H  A K+C+K M  AY 
Sbjct: 439  RHFLPVLKDMPKQYIYEPWTAPLSIQKKAKCIIGEDYPKPVVSHDIAIKECRKKMGEAYE 498

Query: 318  SGKQ-----SNEKRKTTKVSNVVSKSEKNRISFKK 229
              K+     S+E  +  K  N      +N  + +K
Sbjct: 499  LNKRLKGLISDEDLENLKKRNSEEDQRQNAQTKRK 533


>ref|XP_006406944.1| hypothetical protein EUTSA_v10020425mg [Eutrema salsugineum]
            gi|557108090|gb|ESQ48397.1| hypothetical protein
            EUTSA_v10020425mg [Eutrema salsugineum]
          Length = 557

 Score =  565 bits (1455), Expect = e-158
 Identities = 266/384 (69%), Positives = 309/384 (80%), Gaps = 5/384 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPS----PSIGNGPLLIPSTESDDLGCML 1216
            +SHT+FNP +II KNGGKPPL+YQSFLK+ G PS      + +   L P  +   LG   
Sbjct: 158  VSHTLFNPSDIIAKNGGKPPLSYQSFLKIAGEPSCVESELVMSYSSLPPIGDVGKLGISE 217

Query: 1215 TPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATT 1036
             PTLEELG+ +  Q E++PF GGE+EALKRL  S+ D+ WV+ FEKPKGDPSAFLKPATT
Sbjct: 218  VPTLEELGYREDEQAEWTPFRGGESEALKRLTKSISDKVWVANFEKPKGDPSAFLKPATT 277

Query: 1035 VLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRM 859
            VLSPYLKFGCLS+R FYQ L+ IYK  K HT PPVSL GQLLWREFFYT AFGTPNFD+M
Sbjct: 278  VLSPYLKFGCLSSRYFYQCLQRIYKDMKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 337

Query: 858  KENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD 679
            K N ICKQIPW +D  +L+AWRD+KTGYPWIDAIM+QLRKWGWMHHLARH VACFLTRGD
Sbjct: 338  KGNRICKQIPWKEDPDMLAAWRDSKTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTRGD 397

Query: 678  LFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFI 499
            LF+HWE+GRDVF+RLLIDSDWA+NN NWMWLSCS+FF QY+RIYSP++FGKKYDPDGK+I
Sbjct: 398  LFIHWEQGRDVFERLLIDSDWAVNNGNWMWLSCSSFFYQYNRIYSPVSFGKKYDPDGKYI 457

Query: 498  RHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYA 319
            RHFLPVLKDMP QYIYEPWTAPI VQ KAKCI+G DYPKP+V H  ASK+CK+ M   YA
Sbjct: 458  RHFLPVLKDMPKQYIYEPWTAPISVQAKAKCIVGKDYPKPMVLHDLASKECKRKMGETYA 517

Query: 318  SGKQSNEKRKTTKVSNVVSKSEKN 247
              K+ N K     + ++  K +K+
Sbjct: 518  LNKKMNGKVGDEDLRDLRRKLQKD 541


>ref|NP_001046243.2| Os02g0204400 [Oryza sativa Japonica Group]
            gi|306756329|sp|Q0E2Y1.1|UVR3_ORYSJ RecName:
            Full=(6-4)DNA photolyase gi|255670698|dbj|BAF08157.2|
            Os02g0204400 [Oryza sativa Japonica Group]
          Length = 551

 Score =  564 bits (1453), Expect = e-158
 Identities = 259/373 (69%), Positives = 306/373 (82%), Gaps = 2/373 (0%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLP-SPSIGNGPLLIPSTESDDLGCMLTPT 1207
            +SHT+F+P EII+KNGG+PP+TYQSF+ + G P  P +     L P  ++ +   +  P 
Sbjct: 153  VSHTLFDPAEIIEKNGGRPPMTYQSFVAIAGEPPEPIMEEYSELPPVGDTGEYELLPVPR 212

Query: 1206 LEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTVLS 1027
            +EELG+ D+SQE+ S F GGETEALKR+  SL D++WV++FEKPKGDPSAFLKPATTVLS
Sbjct: 213  VEELGYGDISQEDLSLFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLS 272

Query: 1026 PYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRMKEN 850
            PYLKFGCLS+R FY  +++IY+  K HT PPVSL GQLLWR+FFYTVAFGTPNFD+MK N
Sbjct: 273  PYLKFGCLSSRYFYHCIQDIYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGN 332

Query: 849  AICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFL 670
             ICKQIPW ++E L  AWRD +TGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLF+
Sbjct: 333  KICKQIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFI 392

Query: 669  HWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIRHF 490
            HWEKGRDVF+RLLIDSDWA+NN NWMWLSCS+FF QYHRIYSP +FGKKYDP+G +IRHF
Sbjct: 393  HWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYIRHF 452

Query: 489  LPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYASGK 310
            +PVLKDMP +YIYEPWTAP+ +Q KA CIIG DYPKPVV H  ASK+CKK M  AYAS +
Sbjct: 453  IPVLKDMPKEYIYEPWTAPLSIQKKANCIIGKDYPKPVVDHAIASKECKKMMGEAYASNR 512

Query: 309  QSNEKRKTTKVSN 271
              ++K    K SN
Sbjct: 513  LDDDKPDKGKSSN 525


>gb|EEE56527.1| hypothetical protein OsJ_05816 [Oryza sativa Japonica Group]
          Length = 551

 Score =  564 bits (1453), Expect = e-158
 Identities = 259/373 (69%), Positives = 306/373 (82%), Gaps = 2/373 (0%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLP-SPSIGNGPLLIPSTESDDLGCMLTPT 1207
            +SHT+F+P EII+KNGG+PP+TYQSF+ + G P  P +     L P  ++ +   +  P 
Sbjct: 153  VSHTLFDPAEIIEKNGGRPPMTYQSFVAIAGEPPEPIMEEYSELPPVGDTGEYELLPVPR 212

Query: 1206 LEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTVLS 1027
            +EELG+ D+SQE+ S F GGETEALKR+  SL D++WV++FEKPKGDPSAFLKPATTVLS
Sbjct: 213  VEELGYGDISQEDLSLFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKPATTVLS 272

Query: 1026 PYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRMKEN 850
            PYLKFGCLS+R FY  +++IY+  K HT PPVSL GQLLWR+FFYTVAFGTPNFD+MK N
Sbjct: 273  PYLKFGCLSSRYFYHCIQDIYRSTKKHTNPPVSLTGQLLWRDFFYTVAFGTPNFDQMKGN 332

Query: 849  AICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFL 670
             ICKQIPW ++E L  AWRD +TGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLF+
Sbjct: 333  KICKQIPWTENEELFPAWRDGRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFI 392

Query: 669  HWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIRHF 490
            HWEKGRDVF+RLLIDSDWA+NN NWMWLSCS+FF QYHRIYSP +FGKKYDP+G +IRHF
Sbjct: 393  HWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTSFGKKYDPNGNYIRHF 452

Query: 489  LPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYASGK 310
            +PVLKDMP +YIYEPWTAP+ +Q KA CIIG DYPKPVV H  ASK+CKK M  AYAS +
Sbjct: 453  IPVLKDMPKEYIYEPWTAPLSIQKKANCIIGKDYPKPVVDHAIASKECKKMMGEAYASNR 512

Query: 309  QSNEKRKTTKVSN 271
              ++K    K SN
Sbjct: 513  LDDDKPDKGKSSN 525


>ref|XP_006385492.1| hypothetical protein POPTR_0003s05870g [Populus trichocarpa]
            gi|550342501|gb|ERP63289.1| hypothetical protein
            POPTR_0003s05870g [Populus trichocarpa]
          Length = 418

 Score =  563 bits (1452), Expect = e-158
 Identities = 265/396 (66%), Positives = 322/396 (81%), Gaps = 7/396 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLG----CML 1216
            +SHT+FNP +IIQ+NGGKPPLTYQSFLKL G   PS  + PLL   +    +G    C +
Sbjct: 18   VSHTLFNPADIIQRNGGKPPLTYQSFLKLAG--QPSWASSPLLTSISSLPPVGDVGSCEI 75

Query: 1215 T--PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPA 1042
            +  PT+++LG+ D+ QE + PF GGE+EALKRL  S+ D++WV+ FEKPKG+PSAF+KPA
Sbjct: 76   SEVPTIKDLGYGDIEQE-WIPFRGGESEALKRLKESISDKEWVANFEKPKGNPSAFVKPA 134

Query: 1041 TTVLSPYLKFGCLSARLFYQRLKEIYKKA-KHTQPPVSLEGQLLWREFFYTVAFGTPNFD 865
            TTVLSPYLKFGCLS+R FYQ L+++YK   KHT PPVSL GQLLWR+FFYTVAFGTPNFD
Sbjct: 135  TTVLSPYLKFGCLSSRYFYQCLQDVYKNVQKHTSPPVSLAGQLLWRDFFYTVAFGTPNFD 194

Query: 864  RMKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTR 685
            RM+ N +CKQIPW DD+ LL+AWR+A+TGYPWIDAIM+QLRKWGWMHHLARHSVACFLTR
Sbjct: 195  RMEGNKLCKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHSVACFLTR 254

Query: 684  GDLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGK 505
            GDLFLHWE+GRDVF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G 
Sbjct: 255  GDLFLHWERGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGD 314

Query: 504  FIRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAA 325
            +IRHFLPVLKDMP +YIYEPWTAP  +Q KAKCIIG DYPKPVV H  ASK+CK+ ++ A
Sbjct: 315  YIRHFLPVLKDMPKEYIYEPWTAPPGIQRKAKCIIGRDYPKPVVYHDSASKECKRKLAEA 374

Query: 324  YASGKQSNEKRKTTKVSNVVSKSEKNRISFKKLK*Q 217
            YA  K+ N +     + N+  K E++     K++ Q
Sbjct: 375  YALNKKLNGQLSQEDLDNLRRKLEQDEDQEPKIRRQ 410


>ref|XP_002304163.2| hypothetical protein POPTR_0003s05870g [Populus trichocarpa]
            gi|550342500|gb|EEE79142.2| hypothetical protein
            POPTR_0003s05870g [Populus trichocarpa]
          Length = 613

 Score =  563 bits (1452), Expect = e-158
 Identities = 265/396 (66%), Positives = 322/396 (81%), Gaps = 7/396 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLG----CML 1216
            +SHT+FNP +IIQ+NGGKPPLTYQSFLKL G   PS  + PLL   +    +G    C +
Sbjct: 213  VSHTLFNPADIIQRNGGKPPLTYQSFLKLAG--QPSWASSPLLTSISSLPPVGDVGSCEI 270

Query: 1215 T--PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPA 1042
            +  PT+++LG+ D+ QE + PF GGE+EALKRL  S+ D++WV+ FEKPKG+PSAF+KPA
Sbjct: 271  SEVPTIKDLGYGDIEQE-WIPFRGGESEALKRLKESISDKEWVANFEKPKGNPSAFVKPA 329

Query: 1041 TTVLSPYLKFGCLSARLFYQRLKEIYKKA-KHTQPPVSLEGQLLWREFFYTVAFGTPNFD 865
            TTVLSPYLKFGCLS+R FYQ L+++YK   KHT PPVSL GQLLWR+FFYTVAFGTPNFD
Sbjct: 330  TTVLSPYLKFGCLSSRYFYQCLQDVYKNVQKHTSPPVSLAGQLLWRDFFYTVAFGTPNFD 389

Query: 864  RMKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTR 685
            RM+ N +CKQIPW DD+ LL+AWR+A+TGYPWIDAIM+QLRKWGWMHHLARHSVACFLTR
Sbjct: 390  RMEGNKLCKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHSVACFLTR 449

Query: 684  GDLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGK 505
            GDLFLHWE+GRDVF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G 
Sbjct: 450  GDLFLHWERGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGD 509

Query: 504  FIRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAA 325
            +IRHFLPVLKDMP +YIYEPWTAP  +Q KAKCIIG DYPKPVV H  ASK+CK+ ++ A
Sbjct: 510  YIRHFLPVLKDMPKEYIYEPWTAPPGIQRKAKCIIGRDYPKPVVYHDSASKECKRKLAEA 569

Query: 324  YASGKQSNEKRKTTKVSNVVSKSEKNRISFKKLK*Q 217
            YA  K+ N +     + N+  K E++     K++ Q
Sbjct: 570  YALNKKLNGQLSQEDLDNLRRKLEQDEDQEPKIRRQ 605


>ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana]
            gi|306756349|sp|O48652.2|UVR3_ARATH RecName:
            Full=(6-4)DNA photolyase; AltName: Full=Protein UV repair
            defective 3 gi|332642182|gb|AEE75703.1| (6-4)DNA
            photolyase [Arabidopsis thaliana]
          Length = 556

 Score =  563 bits (1451), Expect = e-158
 Identities = 263/394 (66%), Positives = 314/394 (79%), Gaps = 5/394 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPS----IGNGPLLIPSTESDDLGCML 1216
            +SHT+FNP  II+KNGGKPPL+YQSFLK+ G PS +    + +   L P  +  +LG   
Sbjct: 158  VSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSYSSLPPIGDIGNLGISE 217

Query: 1215 TPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATT 1036
             P+LEELG++D  Q +++PF GGE+EALKRL  S+ D+ WV+ FEKPKGDPSAFLKPATT
Sbjct: 218  VPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATT 277

Query: 1035 VLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRM 859
            V+SPYLKFGCLS+R FYQ L+ IYK  K HT PPVSL GQLLWREFFYT AFGTPNFD+M
Sbjct: 278  VMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 337

Query: 858  KENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD 679
            K N ICKQIPW +D  +L+AWRD KTGYPWIDAIM+QL KWGWMHHLARH VACFLTRGD
Sbjct: 338  KGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGD 397

Query: 678  LFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFI 499
            LF+HWE+GRDVF+RLLIDSDWA+NN NWMWLSCS+FF Q++RIYSPI+FGKKYDPDGK+I
Sbjct: 398  LFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYI 457

Query: 498  RHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYA 319
            RHFLPVLKDMP QYIYEPWTAP+ VQ KA CI+G DYPKP+V H  ASK+CK+ M  AYA
Sbjct: 458  RHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYA 517

Query: 318  SGKQSNEKRKTTKVSNVVSKSEKNRISFKKLK*Q 217
              K+ + K     + ++  K +K+     K++ Q
Sbjct: 518  LNKKMDGKVDEENLRDLRRKLQKDEHEESKIRNQ 551


>pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312125|pdb|3FY4|B
            Chain B, (6-4) Photolyase Crystal Structure
            gi|228312126|pdb|3FY4|C Chain C, (6-4) Photolyase Crystal
            Structure gi|2804280|dbj|BAA24449.1| 6-4 photolyase
            [Arabidopsis thaliana] gi|3929918|dbj|BAA34711.1| 6-4
            photolyase [Arabidopsis thaliana]
            gi|11994334|dbj|BAB02293.1| 6-4 photolyase [Arabidopsis
            thaliana]
          Length = 537

 Score =  563 bits (1451), Expect = e-158
 Identities = 263/394 (66%), Positives = 314/394 (79%), Gaps = 5/394 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPS----IGNGPLLIPSTESDDLGCML 1216
            +SHT+FNP  II+KNGGKPPL+YQSFLK+ G PS +    + +   L P  +  +LG   
Sbjct: 139  VSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSYSSLPPIGDIGNLGISE 198

Query: 1215 TPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATT 1036
             P+LEELG++D  Q +++PF GGE+EALKRL  S+ D+ WV+ FEKPKGDPSAFLKPATT
Sbjct: 199  VPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATT 258

Query: 1035 VLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRM 859
            V+SPYLKFGCLS+R FYQ L+ IYK  K HT PPVSL GQLLWREFFYT AFGTPNFD+M
Sbjct: 259  VMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 318

Query: 858  KENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD 679
            K N ICKQIPW +D  +L+AWRD KTGYPWIDAIM+QL KWGWMHHLARH VACFLTRGD
Sbjct: 319  KGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGD 378

Query: 678  LFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFI 499
            LF+HWE+GRDVF+RLLIDSDWA+NN NWMWLSCS+FF Q++RIYSPI+FGKKYDPDGK+I
Sbjct: 379  LFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYI 438

Query: 498  RHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYA 319
            RHFLPVLKDMP QYIYEPWTAP+ VQ KA CI+G DYPKP+V H  ASK+CK+ M  AYA
Sbjct: 439  RHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYA 498

Query: 318  SGKQSNEKRKTTKVSNVVSKSEKNRISFKKLK*Q 217
              K+ + K     + ++  K +K+     K++ Q
Sbjct: 499  LNKKMDGKVDEENLRDLRRKLQKDEHEESKIRNQ 532


>ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]
          Length = 564

 Score =  562 bits (1449), Expect = e-157
 Identities = 259/366 (70%), Positives = 307/366 (83%), Gaps = 7/366 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLGCMLT--- 1213
            +SHT+F+  EIIQKNGG+PPL+YQSFLKL G   PS  + PLL   +    +G + T   
Sbjct: 165  VSHTLFDSAEIIQKNGGRPPLSYQSFLKLAG--QPSWASSPLLTTLSWLPPVGDVGTCEI 222

Query: 1212 ---PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPA 1042
               PT++ELG+E++ Q+E +PF GGE+EALKRL  S++D++WV+ FEKPKGDPSAFLKPA
Sbjct: 223  SNVPTVKELGYEEIGQDESTPFKGGESEALKRLRESIRDKEWVANFEKPKGDPSAFLKPA 282

Query: 1041 TTVLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFD 865
            TTVLSPYLKFGCLS+R FYQ L ++YK  K HT PPVSL GQLLWR+FFYTV FGTPNFD
Sbjct: 283  TTVLSPYLKFGCLSSRYFYQCLTDVYKNMKWHTSPPVSLVGQLLWRDFFYTVGFGTPNFD 342

Query: 864  RMKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTR 685
            RMK N ICKQIPW DD+ LL+AWR+A+TGYPWIDAIM+QLRKWGWMHHLARH VACFLTR
Sbjct: 343  RMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTR 402

Query: 684  GDLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGK 505
            GDLF+HWEKGRDVF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G 
Sbjct: 403  GDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGN 462

Query: 504  FIRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAA 325
            +IRHFLP+LKDMP +YIYEPWTAP  +Q KAKCIIG DYPKPVVCH  A K+CK+ ++ A
Sbjct: 463  YIRHFLPILKDMPKEYIYEPWTAPPSIQAKAKCIIGKDYPKPVVCHDSAIKECKRKLAEA 522

Query: 324  YASGKQ 307
            YA  K+
Sbjct: 523  YALNKR 528


>ref|XP_002451747.1| hypothetical protein SORBIDRAFT_04g007140 [Sorghum bicolor]
            gi|241931578|gb|EES04723.1| hypothetical protein
            SORBIDRAFT_04g007140 [Sorghum bicolor]
          Length = 550

 Score =  562 bits (1449), Expect = e-157
 Identities = 254/360 (70%), Positives = 304/360 (84%), Gaps = 2/360 (0%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLP-SPSIGNGPLLIPSTESDDLGCMLTPT 1207
            +SHT+F+P EII+KNGG+PPLTYQSF+ + G P  P +     L P  ++ +   +  PT
Sbjct: 150  VSHTLFDPAEIIKKNGGRPPLTYQSFVSIAGEPPDPIMEEYSELPPLGDTGEYELLPVPT 209

Query: 1206 LEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTVLS 1027
            +EELG+ D+S+EE  PF GGETEAL+R+  SLQ+++WV++FEKPKGDPSAFLKP+TTVLS
Sbjct: 210  VEELGYVDISEEEIPPFRGGETEALRRMKESLQNKEWVAKFEKPKGDPSAFLKPSTTVLS 269

Query: 1026 PYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRMKEN 850
            PYLKFGCLS+R FY  ++++YK  + HT+PPVSL GQLLWR+FFYTV++GTPNFDRMK N
Sbjct: 270  PYLKFGCLSSRYFYHCIQDVYKSVRNHTKPPVSLIGQLLWRDFFYTVSYGTPNFDRMKGN 329

Query: 849  AICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFL 670
             ICKQIPW ++E L  AWRD +TGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD+F+
Sbjct: 330  KICKQIPWSENEELFVAWRDGQTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDMFI 389

Query: 669  HWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIRHF 490
            HWEKGRDVF+RLLIDSDWA+NN NWMWLSCS+FF QYHRIYSPITFGKKYDP+G +IRHF
Sbjct: 390  HWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPITFGKKYDPNGNYIRHF 449

Query: 489  LPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYASGK 310
            +PVLKDMP +YIYEPWTAP+ +Q KA CIIG DYPKPVV H  ASK+CKK M  AYAS +
Sbjct: 450  IPVLKDMPREYIYEPWTAPLSIQKKANCIIGKDYPKPVVDHETASKECKKRMGEAYASSR 509


>emb|CBI36257.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  562 bits (1449), Expect = e-157
 Identities = 259/366 (70%), Positives = 307/366 (83%), Gaps = 7/366 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLGCMLT--- 1213
            +SHT+F+  EIIQKNGG+PPL+YQSFLKL G   PS  + PLL   +    +G + T   
Sbjct: 139  VSHTLFDSAEIIQKNGGRPPLSYQSFLKLAG--QPSWASSPLLTTLSWLPPVGDVGTCEI 196

Query: 1212 ---PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPA 1042
               PT++ELG+E++ Q+E +PF GGE+EALKRL  S++D++WV+ FEKPKGDPSAFLKPA
Sbjct: 197  SNVPTVKELGYEEIGQDESTPFKGGESEALKRLRESIRDKEWVANFEKPKGDPSAFLKPA 256

Query: 1041 TTVLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFD 865
            TTVLSPYLKFGCLS+R FYQ L ++YK  K HT PPVSL GQLLWR+FFYTV FGTPNFD
Sbjct: 257  TTVLSPYLKFGCLSSRYFYQCLTDVYKNMKWHTSPPVSLVGQLLWRDFFYTVGFGTPNFD 316

Query: 864  RMKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTR 685
            RMK N ICKQIPW DD+ LL+AWR+A+TGYPWIDAIM+QLRKWGWMHHLARH VACFLTR
Sbjct: 317  RMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTR 376

Query: 684  GDLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGK 505
            GDLF+HWEKGRDVF+RLLIDSDWA+NN NW+WLSCS+FF QY+RIYSPI+FGKKYDP+G 
Sbjct: 377  GDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPNGN 436

Query: 504  FIRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAA 325
            +IRHFLP+LKDMP +YIYEPWTAP  +Q KAKCIIG DYPKPVVCH  A K+CK+ ++ A
Sbjct: 437  YIRHFLPILKDMPKEYIYEPWTAPPSIQAKAKCIIGKDYPKPVVCHDSAIKECKRKLAEA 496

Query: 324  YASGKQ 307
            YA  K+
Sbjct: 497  YALNKR 502


>ref|XP_006647054.1| PREDICTED: LOW QUALITY PROTEIN: (6-4)DNA photolyase-like, partial
            [Oryza brachyantha]
          Length = 490

 Score =  562 bits (1448), Expect = e-157
 Identities = 263/398 (66%), Positives = 315/398 (79%), Gaps = 17/398 (4%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTY------QSFLKLIGLP-SPSIGNGPLLIPSTESDDLG 1225
            +SHT+F+P EII+KNGG+PP+TY      Q+F+ + G P  P +     L P  ++ +  
Sbjct: 89   VSHTLFDPAEIIEKNGGRPPVTYRRSWPGQAFVAVAGQPPEPVMEEYSELPPVGDTGEYE 148

Query: 1224 CMLTPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKP 1045
             +  P +EELG+ D+SQEE SPF GGETEALKR+  SL D++WV++FEKPKGDPSAFLKP
Sbjct: 149  LLPVPKVEELGYGDISQEELSPFRGGETEALKRMRESLHDKEWVAKFEKPKGDPSAFLKP 208

Query: 1044 ATTVLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNF 868
            ATTVLSPYLKFGCLS+R FY  +++IY+  K HT PPVSL GQLLWR+FFYTV+FGTPNF
Sbjct: 209  ATTVLSPYLKFGCLSSRYFYHCIQDIYRSTKKHTNPPVSLIGQLLWRDFFYTVSFGTPNF 268

Query: 867  DRMKENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLT 688
            DRMK N ICKQIPW ++E L  AWRD +TGYPWIDAIMIQLR+WGWMHHLARHSVACFLT
Sbjct: 269  DRMKGNRICKQIPWTENEELFLAWRDGRTGYPWIDAIMIQLRRWGWMHHLARHSVACFLT 328

Query: 687  RGDLFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDG 508
            RGDLF+HWEKGRDVF+RLLIDSDWA+NN NW+WLSCS+FF QYHRIYSPI+FGKKYDP+G
Sbjct: 329  RGDLFIHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYHRIYSPISFGKKYDPNG 388

Query: 507  KFIRHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSA 328
             +IRHF+PVLKDMP +YIYEPWTAP+ +Q KAKCIIG DYPKPVV H  ASK+CKK M  
Sbjct: 389  NYIRHFIPVLKDMPKEYIYEPWTAPLSIQKKAKCIIGKDYPKPVVDHEIASKECKKKMGE 448

Query: 327  AYAS---------GKQSNEKRKTTKVSNVVSKSEKNRI 241
            AYAS         GK SN  R+     + V+ S+  ++
Sbjct: 449  AYASKHLDDKPNKGKPSNSSRRKLSAGSQVTSSKTKQL 486


>ref|XP_004951515.1| PREDICTED: (6-4)DNA photolyase-like isoform X3 [Setaria italica]
          Length = 544

 Score =  561 bits (1445), Expect = e-157
 Identities = 257/376 (68%), Positives = 309/376 (82%), Gaps = 11/376 (2%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLP-SPSIGNGPLLIPSTESDDLGCMLTPT 1207
            +SHT+F+P EII KNGG+PPLTYQSF+ + G P  P +     L P  ++ +   +  PT
Sbjct: 145  VSHTLFDPAEIINKNGGRPPLTYQSFIAIAGEPPEPLMEEYSELPPVGDTGEYELLPVPT 204

Query: 1206 LEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTVLS 1027
            +EELG+ D+SQEE  PF GGETEAL+R+  SL++++WV++FEKPKGDPSAFLKPATTVLS
Sbjct: 205  VEELGYGDISQEEIPPFRGGETEALRRMKESLENKEWVAKFEKPKGDPSAFLKPATTVLS 264

Query: 1026 PYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRMKEN 850
            PYLKFGCLS+R FY  ++++Y+  + +T+PPVSL GQLLWR+FFYTV+FGTPNFD+MK N
Sbjct: 265  PYLKFGCLSSRYFYHCIQDVYRSVRNYTKPPVSLTGQLLWRDFFYTVSFGTPNFDQMKGN 324

Query: 849  AICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFL 670
             ICKQIPW ++E L  AWRD++TGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLF+
Sbjct: 325  KICKQIPWSENEELFVAWRDSRTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFI 384

Query: 669  HWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIRHF 490
            HWEKGRDVF+RLLIDSDWA+NN NW+WLSCS+FF QYHRIYSPITFGKKYDP+G +IRHF
Sbjct: 385  HWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYHRIYSPITFGKKYDPNGNYIRHF 444

Query: 489  LPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYAS-- 316
            +P LKDMP +YIYEPWTAP+ +Q KAKCIIG DYPKPVV H  ASK+C+K M  AYAS  
Sbjct: 445  IPALKDMPREYIYEPWTAPLSIQKKAKCIIGKDYPKPVVDHETASKECRKRMGEAYASSR 504

Query: 315  -------GKQSNEKRK 289
                   GK SN  R+
Sbjct: 505  LDSNPSRGKPSNMSRR 520


>ref|XP_006465388.1| PREDICTED: (6-4)DNA photolyase-like [Citrus sinensis]
          Length = 559

 Score =  560 bits (1444), Expect = e-157
 Identities = 262/394 (66%), Positives = 315/394 (79%), Gaps = 7/394 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPL----LIPSTESDDLGCML 1216
            +SHT+FNP +IIQKNGGKPPLTYQSFLKL G PS +    P+    L P  +  +     
Sbjct: 155  VSHTLFNPADIIQKNGGKPPLTYQSFLKLAGQPSWASSPLPVSLSSLPPVGDVGNFEISE 214

Query: 1215 TPTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATT 1036
             PT+EELG++   QEE SPF GGE+EALK+L  S+ D++WV+ FEKPKGDPSA+L PATT
Sbjct: 215  VPTVEELGYKGYGQEELSPFRGGESEALKKLRESINDKEWVANFEKPKGDPSAYLTPATT 274

Query: 1035 VLSPYLKFGCLSARLFYQRLKEIYKKAK-HTQPPVSLEGQLLWREFFYTVAFGTPNFDRM 859
            VLSPYLKFGCLS+R FYQ L ++Y   K HT PPVSL GQLLWR+FFYTVAFGTPNFDRM
Sbjct: 275  VLSPYLKFGCLSSRYFYQCLTDVYNNVKKHTAPPVSLVGQLLWRDFFYTVAFGTPNFDRM 334

Query: 858  KENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGD 679
            K N ICKQIPW +D+ LL+AWR+A+TGYPWIDAIM+QLRKWGWMHHLARH VACFLTRGD
Sbjct: 335  KGNRICKQIPWSNDDELLAAWREARTGYPWIDAIMVQLRKWGWMHHLARHCVACFLTRGD 394

Query: 678  LFLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFI 499
            +F+HWEKGRDVFDRLLIDSDWA+NN NW+WLSCS+FF QY+RIYSP++FGKKYDP+G +I
Sbjct: 395  MFVHWEKGRDVFDRLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPVSFGKKYDPNGNYI 454

Query: 498  RHFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYA 319
            RHFLPVLKDMP +YIYEPWTAP+ +Q +AKCIIG DYP PVV H  ASK+CK+ +  AYA
Sbjct: 455  RHFLPVLKDMPKEYIYEPWTAPLTIQTRAKCIIGRDYPAPVVSHDSASKECKRKLGEAYA 514

Query: 318  SGKQSNEKRKTTKVSNVVSK--SEKNRISFKKLK 223
              ++ N +     + N+  K   E+N+ S ++ K
Sbjct: 515  LNQKLNGQVSEDGLKNLRRKFEGEENQESGRRQK 548


>ref|XP_006585645.1| PREDICTED: (6-4)DNA photolyase-like isoform X2 [Glycine max]
          Length = 558

 Score =  560 bits (1443), Expect = e-157
 Identities = 265/396 (66%), Positives = 314/396 (79%), Gaps = 7/396 (1%)
 Frame = -3

Query: 1383 ISHTIFNPIEIIQKNGGKPPLTYQSFLKLIGLPSPSIGNGPLLIPSTESDDLG-CMLT-- 1213
            +SHT+FNP +II+KNGGKPPL+YQSF+KL G P  S+      +P     +LG C ++  
Sbjct: 162  VSHTLFNPTDIIEKNGGKPPLSYQSFVKLAGEPPSSLSTVYSSLPPV--GNLGSCDISEV 219

Query: 1212 PTLEELGFEDVSQEEFSPFIGGETEALKRLNSSLQDQKWVSEFEKPKGDPSAFLKPATTV 1033
            PT+ +LG+ D  Q+EFSPF GGE+EALKRL+  ++D+KWV+ FEKPKG+PSAFLKPATTV
Sbjct: 220  PTIRDLGYGDAEQDEFSPFKGGESEALKRLDECMKDKKWVANFEKPKGNPSAFLKPATTV 279

Query: 1032 LSPYLKFGCLSARLFYQRLKEIYKKA-KHTQPPVSLEGQLLWREFFYTVAFGTPNFDRMK 856
            LSPYLKFGCLS R FYQ ++++YK   KHT PPVSL GQLLWREFFYT AFGTPNFDRMK
Sbjct: 280  LSPYLKFGCLSPRYFYQSIQDVYKSMPKHTLPPVSLIGQLLWREFFYTAAFGTPNFDRMK 339

Query: 855  ENAICKQIPWIDDEYLLSAWRDAKTGYPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDL 676
             N ICKQIPW DD+ LL AWR+A+TG+PWIDAIM+QLRKWGWMHHLARHSVACFLTRGDL
Sbjct: 340  GNRICKQIPWKDDDKLLEAWREARTGFPWIDAIMVQLRKWGWMHHLARHSVACFLTRGDL 399

Query: 675  FLHWEKGRDVFDRLLIDSDWALNNANWMWLSCSAFFSQYHRIYSPITFGKKYDPDGKFIR 496
            F+HWEKGRDVF+RLLIDSDWA+NN NWMWLSCS+FF QY+RIYSP TFGKKYDP+G +IR
Sbjct: 400  FVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDYIR 459

Query: 495  HFLPVLKDMPAQYIYEPWTAPIEVQMKAKCIIGSDYPKPVVCHLDASKQCKKNMSAAYAS 316
            HFLPVLKDMP +YIYEPWTAP  +Q KA CIIG DYP PVV H  ASK+C++ M  AYA 
Sbjct: 460  HFLPVLKDMPREYIYEPWTAPKSIQTKANCIIGKDYPMPVVSHDSASKECRRKMGEAYAL 519

Query: 315  GKQSNEKRKTTKVSNV---VSKSEKNRISFKKLK*Q 217
             K+ N       + N+   + +SE      K+ K Q
Sbjct: 520  NKELNGLVSEDDLKNLRRKLDESEGQEAGAKRYKQQ 555