BLASTX nr result
ID: Ephedra26_contig00019907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00019907
(2209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006844770.1| hypothetical protein AMTR_s00016p00258500 [A... 435 e-126
ref|XP_004250504.1| PREDICTED: endoribonuclease Dicer homolog 2-... 422 e-125
ref|XP_006428679.1| hypothetical protein CICLE_v10010912mg [Citr... 423 e-124
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-... 419 e-123
emb|CBI17597.3| unnamed protein product [Vitis vinifera] 419 e-123
ref|XP_006480493.1| PREDICTED: endoribonuclease Dicer homolog 2-... 420 e-123
gb|EXB88160.1| Endoribonuclease Dicer-2-like protein [Morus nota... 413 e-122
ref|XP_002315119.1| hypothetical protein POPTR_0010s18870g [Popu... 418 e-122
ref|XP_006408318.1| hypothetical protein EUTSA_v10019898mg [Eutr... 420 e-122
ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arab... 427 e-121
ref|XP_006428678.1| hypothetical protein CICLE_v10010911mg [Citr... 418 e-121
ref|XP_006480490.1| PREDICTED: endoribonuclease Dicer homolog 2-... 417 e-120
ref|XP_006480488.1| PREDICTED: endoribonuclease Dicer homolog 2-... 417 e-120
ref|XP_002312197.1| hypothetical protein POPTR_0008s07580g [Popu... 409 e-120
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata] 411 e-120
gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana] 416 e-118
ref|NP_566199.4| endoribonuclease Dicer-like 2 [Arabidopsis thal... 416 e-118
gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana] 416 e-118
ref|NP_001078101.1| endoribonuclease Dicer-like 2 [Arabidopsis t... 416 e-118
gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana] 416 e-118
>ref|XP_006844770.1| hypothetical protein AMTR_s00016p00258500 [Amborella trichopoda]
gi|548847241|gb|ERN06445.1| hypothetical protein
AMTR_s00016p00258500 [Amborella trichopoda]
Length = 1424
Score = 435 bits (1118), Expect(2) = e-126
Identities = 265/676 (39%), Positives = 384/676 (56%), Gaps = 18/676 (2%)
Frame = -1
Query: 1975 NAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQR 1796
N V+ F QD L + +P+ WH +++ + AG LS KV L+ +L +R K R
Sbjct: 343 NTVRSFSQDVLEMLSEYIPTGELWHIGSNLKADLDAGLLSGKVHCLIQSLMEYRKEKHLR 402
Query: 1795 CIIFVERKITSVVISKILQSMDCFTHLTIEYMVGNTATVQEKSQRDQKKIIEDFRNGKVN 1616
CIIFVER IT++V+ ++L + F+ YM GN + +Q +++ Q ++++FR G VN
Sbjct: 403 CIIFVERVITAIVLKELLNQLQKFSIWKTTYMAGNNSCLQSQTRVQQINVVDNFRGGMVN 462
Query: 1615 IIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLV--RDGEQLAQ 1442
IIVATQ+LEEGLD+Q CN+V+RYD T+ SFIQSRGRARM S YLL+V +D +
Sbjct: 463 IIVATQILEEGLDVQSCNLVIRYDPSVTVRSFIQSRGRARMPGSDYLLIVESKDYATFRR 522
Query: 1441 VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCSQ 1262
+++ L K MR +L+ ++ L YY VE TGA+VT NSSVAL+Y YCSQ
Sbjct: 523 IDKYLVSGKVMRTESLRRKFDPALPIENPLHSGEYYRVETTGAIVTLNSSVALIYRYCSQ 582
Query: 1261 LPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLEACKQLHTIG 1082
LP DRY+KS P F ID+E G C+L+LP +CPIP V VH LK+ ACL ACK+LH +G
Sbjct: 583 LPADRYFKSCPRFDIDEERGFCILRLPKSCPIPPVKVHGQTDVLKQSACLVACKRLHEVG 642
Query: 1081 ALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSKQTRFYGYRL 902
AL D LLP + ED D D G + +E + +Y P +G + + Y +
Sbjct: 643 ALTDYLLP--LTEDAED--DASMGSGGEPCEEFHAMYFPQELIGHLKKGCGKELYDCYSI 698
Query: 901 SFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPLELSSHEVKL 722
+ V FR LL+VK LG D + + + V + + + G EL +V +
Sbjct: 699 TLHSNVDHGWEFRSLLLMVKCNLGYDFEQLSFVMGPNQVSVAVNMGYAGTRELDVEQVLM 758
Query: 721 AVLFQVKIFRLLISRTVDSFDHT--NLDGSDLLNKTIMYLILPLVEDG--SNRVDWECIN 554
A FQ IF++LI+ V + L+ + I YL+LP + G S+++DW+ +
Sbjct: 759 ARRFQTTIFKILITGNVSEMRESLERLNQGETCCTQIEYLLLPSIGSGFTSSQIDWDSVR 818
Query: 553 KVGC---DKVSNND---CIQNSE-HLLNTGSGDISAELLVDTVVETPHNKILYYVRNILR 395
D+ N C S H + +G LL +++V TPHN +YY+ +IL
Sbjct: 819 SASALNPDRAKNYQKCHCSPKSNAHFVRLTNGTSCDCLLRNSLVLTPHNGKIYYISSILH 878
Query: 394 DLNASSHMLSGNLSHG---TYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKK 224
D++ +S M + HG TY +YF +H I + + +PLL + LFKV+N+LL++ K
Sbjct: 879 DMDGNSPM-KQDRKHGAPRTYKEYFKWRHDILLQHEMEPLLLGRHLFKVQNWLLKHPCKV 937
Query: 223 KVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRI--SSSV 50
+ VELPPELC I+ F + S +Y+FS +PS+MHRIE+ L A+QLK I +
Sbjct: 938 GTEAINATVELPPELCCIIMFPISISTIYTFSLVPSIMHRIEAFLLAAQLKRTIVGQHAR 997
Query: 49 KVDISTIKVLEALTRK 2
++I IKVLE LT K
Sbjct: 998 DLNIPIIKVLECLTTK 1013
Score = 46.6 bits (109), Expect(2) = e-126
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -3
Query: 2207 AKLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
A+L LK KH ++ + + DS RKI +L+ LFCI+E+G+W AA A E
Sbjct: 267 ARLQDLKLKHTCDLDGVPANGYVNDSVRRKIARLHDTFLFCIQELGVWLAAKAAE 321
>ref|XP_004250504.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum
lycopersicum]
Length = 1402
Score = 422 bits (1085), Expect(2) = e-125
Identities = 256/684 (37%), Positives = 396/684 (57%), Gaps = 18/684 (2%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
G+ ++ V+ F D+ LPS W DI+ AG+LS KV LV++L
Sbjct: 324 GELDVCAQTIVRDFSSDASKVFSACLPSGPHWSIGGDIQANTDAGYLSSKVHCLVESLLE 383
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+R+ K RCIIFVER IT++V+ +L + + E G+ + VQ +S++ Q KI+
Sbjct: 384 YRNLKDLRCIIFVERIITAIVLRSLLNELLPKLSGWRTECTAGHASVVQSQSRKIQNKIV 443
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
E+FR G VNIIVAT +LEEGLD+Q CN+V+R+D T+CS+IQSRGRARM++S +LL+V+
Sbjct: 444 EEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDPSATVCSYIQSRGRARMQNSDFLLMVK 503
Query: 1462 DGEQ--LAQVNRLLGGEKQMREAALQNDRVKSVSKSVLLD---PESYYTVEKTGAVVTSN 1298
G++ LA++ + + MR+ +L R S S L+D E Y VE TGA++T +
Sbjct: 504 SGDESTLARMQNFMASGEMMRQESL---RHASEPCSPLVDEMYDEPCYKVESTGAIITLS 560
Query: 1297 SSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIP--LKK 1124
SSV+LLY YCS+LP D Y+KS P IDKE C L+LP +CP+ R+I + L++
Sbjct: 561 SSVSLLYFYCSRLPSDGYFKSYPRCVIDKESRTCTLQLPKSCPLQRIITVQGNSTKILRQ 620
Query: 1123 LACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKW 944
LACLEACK+LH +GAL DNL+PD++ E E KE G N Y P FV +
Sbjct: 621 LACLEACKELHRVGALTDNLVPDIVEE-----EAINKELGNSNHTVEESKYFPPEFVSHF 675
Query: 943 SILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLN-SPKGVVRLQI 767
+ +Y Y + Q E D + +L V+ L D +L+ + V++Q+
Sbjct: 676 G-NETEAVYYCYLVELQHETYDDFQLHGIILAVRTKLKCDDEILAFDLDVDRRRRVQVQL 734
Query: 766 QFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLVE 590
+++ + L+S E++ FQV +F++L+ R + G + + YL+LP V
Sbjct: 735 KYSKVVTLTSEEIRRCQRFQVSVFKILLDRDLSKLQDALAAGQSPIGSAVSDYLLLPSV- 793
Query: 589 DGSNRVDWECIN------KVGCDKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHN 428
S+ ++W+C+N +V DK + Q+ + +NT +G + + LL +++V TPHN
Sbjct: 794 GKSSEINWKCVNSLLFPSQVLGDKHMDWCSTQDRKRSVNTKTGVVCSCLLENSLVFTPHN 853
Query: 427 KILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNY 248
+Y + L +L+ +S + TY +Y+ K+ IE+ F E+PLLS K++ KV NY
Sbjct: 854 GNIYCITGFLDNLDCNSLLNVRTGESITYREYYKKRQGIELCF-EEPLLSGKRISKVHNY 912
Query: 247 LLQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKS 68
L + + +K +V+LPPELC ++ + S LY++S++PS+MHRIESL+ AS L S
Sbjct: 913 LQRNRTQKAKDSTDSSVQLPPELCFVIMSPISISTLYTYSYVPSIMHRIESLVMASHLNS 972
Query: 67 RISSSVKVD--ISTIKVLEALTRK 2
+ + K++ I T VLEA+T +
Sbjct: 973 MLLNDCKLNVFIPTAMVLEAVTTR 996
Score = 54.7 bits (130), Expect(2) = e-125
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = -3
Query: 2192 LKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACEF 2040
LKEKH I + + SA SA+R++ KLYS LFC+ EMG+W A A EF
Sbjct: 262 LKEKHECSITKSTLSDKSAASAKRRLSKLYSAFLFCLSEMGVWLAFKAAEF 312
>ref|XP_006428679.1| hypothetical protein CICLE_v10010912mg [Citrus clementina]
gi|557530736|gb|ESR41919.1| hypothetical protein
CICLE_v10010912mg [Citrus clementina]
Length = 1396
Score = 423 bits (1088), Expect(2) = e-124
Identities = 248/669 (37%), Positives = 390/669 (58%), Gaps = 13/669 (1%)
Frame = -1
Query: 1969 VKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCI 1790
+K F D+ +PS W DD + + +G L+ K+ L+++L +R + RCI
Sbjct: 332 IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCI 391
Query: 1789 IFVERKITSVVISKILQSMDCFTHLT--IEYMVGNTATVQEKSQRDQKKIIEDFRNGKVN 1616
IFVER IT++V+ +L + H T +Y+ GN + +Q +S++ Q +I+E+FR G VN
Sbjct: 392 IFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVN 450
Query: 1615 IIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQV- 1439
+IVAT +LEEGLD+Q CN+V+ +D +T+CSFIQSRGRARM++S YLL+V+ G+ Q
Sbjct: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
Query: 1438 --NRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCS 1265
N L G K MR+ L + + + + E +Y VE TG + T +SSV+L+Y YCS
Sbjct: 511 LENYLASGNK-MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCS 569
Query: 1264 QLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLEACKQLHTI 1085
+LP D Y+K P F I+KE G C L LP NCPI VI LK+ ACLEACK+LH I
Sbjct: 570 RLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQI 629
Query: 1084 GALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSKQTRFYGYR 905
GAL DNLLPD++ E D +K +G + +P+Y P V + S + ++ Y
Sbjct: 630 GALTDNLLPDIVVEK----HDAQK-RGNEPYNAEHPIYFPPELVNQ-SPQDTKITYHCYL 683
Query: 904 LSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPLELSSHEVK 725
+ +Q + D+ R+ +L ++ L S++ K +L +G + + ++ G ++L ++V
Sbjct: 684 IELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVL 743
Query: 724 LAVLFQVKIFRLLISRTVDSFDHTNLDGSDLL-NKTIMYLILPLVEDGSNRVDWECINKV 548
L FQ+ +FR+++ +D + LDG +L N I YL+LP +DW+ + V
Sbjct: 744 LCRRFQITLFRVIMDHNLDKLNEI-LDGFELRDNLEIDYLLLP---STGQLIDWKTVATV 799
Query: 547 -----GCDKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNILRDLNA 383
K + N + +++T SG + + +++V TPHN +Y + +L LNA
Sbjct: 800 LFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNA 859
Query: 382 SSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKKVPDKSF 203
+S N S TY ++ +++ I++ F +PLL+ +++F V+NYL + +++K+
Sbjct: 860 NSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKI 919
Query: 202 NVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISSSV--KVDISTI 29
+ ELPPELCRI+ + S YSF+F+PS+MHR++SLL A LK+ + V I TI
Sbjct: 920 SFELPPELCRIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI 979
Query: 28 KVLEALTRK 2
KVLEA+T K
Sbjct: 980 KVLEAITTK 988
Score = 50.1 bits (118), Expect(2) = e-124
Identities = 20/54 (37%), Positives = 37/54 (68%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
+L ++ KH + +ENL+++E+ A+ +K+ K+ S LL+C+ E+G+W A A E
Sbjct: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 419 bits (1077), Expect(2) = e-123
Identities = 245/674 (36%), Positives = 386/674 (57%), Gaps = 8/674 (1%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
G+ ++ +K+F +D+ LPS+ DD+E ++GFL+ KV LV +L
Sbjct: 323 GQLDLSGEEIIKNFNKDAYKVISTYLPSDRELSVGDDLEADAESGFLTTKVICLVGSLLQ 382
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+R K RCI+FVER IT++V+ K+L + + Y+ GN + +Q +S+R Q ++
Sbjct: 383 YRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALV 442
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
E+FR G VN+IV+T +LEEGLD+Q CN+V+R+D T+CSFIQSRGRARM++S YLL+V+
Sbjct: 443 EEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQNSDYLLMVK 502
Query: 1462 DGEQ--LAQVNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSV 1289
G+ L+++ L K MRE +L+N + LD E +Y VE T A+VT +SS+
Sbjct: 503 SGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSLDDEEFYWVESTRAIVTLSSSI 562
Query: 1288 ALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLE 1109
LLY YCS+LP D Y+K P I+++ G C + P +CPI V V LK++ACLE
Sbjct: 563 GLLYFYCSRLPSDGYFKPTPRCSINQDMGTCTIYHPKSCPIQTVSVRGNIKTLKQIACLE 622
Query: 1108 ACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSK 929
ACK+LH GAL DNL+P ++ E+ +D E Q YP + N S+
Sbjct: 623 ACKELHKAGALTDNLVPQIVEEEAIVAQD-ENMPYDDEQATYYPPELINP-----SLKDP 676
Query: 928 QTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPL 749
T ++ Y + Q+ +V + +L V+ L D+ +L +G + + + + G +
Sbjct: 677 VTPYHCYLIELDQKYEYEVSPQGIVLAVRSELEYDVGNVNFDLQVDRGTMTVSMNYVGVI 736
Query: 748 ELSSHEVKLAVLFQVKIFRLLISRTVDS--FDHTNLDGSDLLNKTIMYLILPLVEDGS-- 581
L++ +V + FQ+ + R+LI R +D FD +L +++ YL+LP
Sbjct: 737 HLTAEQVLMCRKFQITLLRVLIDRAIDKGVFDRYDLGNDQMVD----YLMLPSTNSREIP 792
Query: 580 NRVDWECINKVGCDKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNI 401
+ VDW+C+ V + ++ + ++T SG + + L +++V TPH Y + I
Sbjct: 793 SIVDWKCLGSVFFSHENASNHMGCFFPRMHTKSGFVCSCTLKNSIVYTPHTSQFYCITGI 852
Query: 400 LRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKK 221
L +LN +S + N TY +Y+ +H IE+ F + LL +++F V+NYL + +++K+
Sbjct: 853 LGELNGNSFLSLKNGGLLTYKEYYRLRHGIELQFDGEKLLKGRRMFVVQNYLQRCRQQKE 912
Query: 220 VPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKS-RISSSVKV 44
+ VELPPELC I + S++YSFS +PS+MHRIESLL A LK+ ++ +
Sbjct: 913 KELSNTTVELPPELCVIFMSPISISIIYSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQN 972
Query: 43 DISTIKVLEALTRK 2
DI T KVLEA+T K
Sbjct: 973 DIPTFKVLEAITTK 986
Score = 53.5 bits (127), Expect(2) = e-123
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACEF 2040
+L LK K+ +E+L + ES+ +SA +KI KL+S LFC+ ++G+W A A EF
Sbjct: 257 QLEILKNKYEHSLESLNLMESTKESARKKISKLFSAFLFCLNDLGLWLALKAAEF 311
>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 419 bits (1077), Expect(2) = e-123
Identities = 245/674 (36%), Positives = 386/674 (57%), Gaps = 8/674 (1%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
G+ ++ +K+F +D+ LPS+ DD+E ++GFL+ KV LV +L
Sbjct: 269 GQLDLSGEEIIKNFNKDAYKVISTYLPSDRELSVGDDLEADAESGFLTTKVICLVGSLLQ 328
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+R K RCI+FVER IT++V+ K+L + + Y+ GN + +Q +S+R Q ++
Sbjct: 329 YRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALV 388
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
E+FR G VN+IV+T +LEEGLD+Q CN+V+R+D T+CSFIQSRGRARM++S YLL+V+
Sbjct: 389 EEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQNSDYLLMVK 448
Query: 1462 DGEQ--LAQVNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSV 1289
G+ L+++ L K MRE +L+N + LD E +Y VE T A+VT +SS+
Sbjct: 449 SGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSLDDEEFYWVESTRAIVTLSSSI 508
Query: 1288 ALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLE 1109
LLY YCS+LP D Y+K P I+++ G C + P +CPI V V LK++ACLE
Sbjct: 509 GLLYFYCSRLPSDGYFKPTPRCSINQDMGTCTIYHPKSCPIQTVSVRGNIKTLKQIACLE 568
Query: 1108 ACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSK 929
ACK+LH GAL DNL+P ++ E+ +D E Q YP + N S+
Sbjct: 569 ACKELHKAGALTDNLVPQIVEEEAIVAQD-ENMPYDDEQATYYPPELINP-----SLKDP 622
Query: 928 QTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPL 749
T ++ Y + Q+ +V + +L V+ L D+ +L +G + + + + G +
Sbjct: 623 VTPYHCYLIELDQKYEYEVSPQGIVLAVRSELEYDVGNVNFDLQVDRGTMTVSMNYVGVI 682
Query: 748 ELSSHEVKLAVLFQVKIFRLLISRTVDS--FDHTNLDGSDLLNKTIMYLILPLVEDGS-- 581
L++ +V + FQ+ + R+LI R +D FD +L +++ YL+LP
Sbjct: 683 HLTAEQVLMCRKFQITLLRVLIDRAIDKGVFDRYDLGNDQMVD----YLMLPSTNSREIP 738
Query: 580 NRVDWECINKVGCDKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNI 401
+ VDW+C+ V + ++ + ++T SG + + L +++V TPH Y + I
Sbjct: 739 SIVDWKCLGSVFFSHENASNHMGCFFPRMHTKSGFVCSCTLKNSIVYTPHTSQFYCITGI 798
Query: 400 LRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKK 221
L +LN +S + N TY +Y+ +H IE+ F + LL +++F V+NYL + +++K+
Sbjct: 799 LGELNGNSFLSLKNGGLLTYKEYYRLRHGIELQFDGEKLLKGRRMFVVQNYLQRCRQQKE 858
Query: 220 VPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKS-RISSSVKV 44
+ VELPPELC I + S++YSFS +PS+MHRIESLL A LK+ ++ +
Sbjct: 859 KELSNTTVELPPELCVIFMSPISISIIYSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQN 918
Query: 43 DISTIKVLEALTRK 2
DI T KVLEA+T K
Sbjct: 919 DIPTFKVLEAITTK 932
Score = 53.5 bits (127), Expect(2) = e-123
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACEF 2040
+L LK K+ +E+L + ES+ +SA +KI KL+S LFC+ ++G+W A A EF
Sbjct: 203 QLEILKNKYEHSLESLNLMESTKESARKKISKLFSAFLFCLNDLGLWLALKAAEF 257
>ref|XP_006480493.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X6 [Citrus
sinensis]
Length = 1396
Score = 420 bits (1080), Expect(2) = e-123
Identities = 247/669 (36%), Positives = 389/669 (58%), Gaps = 13/669 (1%)
Frame = -1
Query: 1969 VKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCI 1790
+K F D+ +PS W DD + + +G L+ K+ L+++L +R + RCI
Sbjct: 332 IKKFGSDASQALVTYVPSGAEWSIGDDSKFNLDSGLLTEKIVCLIESLLEYRGVEDIRCI 391
Query: 1789 IFVERKITSVVISKILQSMDCFTHLT--IEYMVGNTATVQEKSQRDQKKIIEDFRNGKVN 1616
IFVER IT++V+ +L + H T +Y+ GN + +Q +S++ Q +I+E+FR G VN
Sbjct: 392 IFVERVITAIVLQSLLSEL-LPRHCTWKTKYIAGNNSGIQCQSRKKQNEIVEEFRRGLVN 450
Query: 1615 IIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQV- 1439
+IVAT +LEEGLD+Q CN+V+ +D +T+CSFIQSRGRARM++S YLL+V+ G+ Q
Sbjct: 451 VIVATSILEEGLDVQSCNLVIMFDPSRTVCSFIQSRGRARMQNSDYLLMVKSGDSTTQSR 510
Query: 1438 --NRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCS 1265
N L G K MR+ L + + + + E +Y VE TG + T +SSV+L+Y YCS
Sbjct: 511 LENYLASGNK-MRKEVLSHASLPCSPLNNHMYGEDFYHVESTGTIATLSSSVSLIYFYCS 569
Query: 1264 QLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLEACKQLHTI 1085
+LP D Y+K P F I+KE G C L LP NCPI VI LK+ ACLEACK+LH I
Sbjct: 570 RLPSDGYFKPTPKFHINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQAACLEACKKLHQI 629
Query: 1084 GALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSKQTRFYGYR 905
GAL DNLLPD++ E D +K +G + +P+Y P V + S + ++ Y
Sbjct: 630 GALTDNLLPDIVVEK----HDAQK-RGNEPYNAEHPIYFPPELVNQ-SPQDTKITYHCYL 683
Query: 904 LSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPLELSSHEVK 725
+ +Q + D+ R+ +L ++ L S++ K +L +G + + ++ G ++L ++V
Sbjct: 684 IELKQHFNYDISARNIVLAMRTELESEIKKVNFDLEVERGRLTVNLKHLGRIQLIPNQVL 743
Query: 724 LAVLFQVKIFRLLISRTVDSFDHTNLDGSDLL-NKTIMYLILPLVEDGSNRVDWECINKV 548
L FQ+ +FR+++ +D + LDG +L N I YL+LP +DW+ + V
Sbjct: 744 LCRRFQITLFRVIMDHNLDKLNEI-LDGFELRDNLEIDYLLLP---STGQLIDWKTVATV 799
Query: 547 -----GCDKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNILRDLNA 383
K + N + +++T SG + + +++V TPHN +Y + +L LNA
Sbjct: 800 LFPRDNGSKHNMNCSTMFNARIVHTKSGPLCTCKIHNSLVCTPHNGQIYCITGVLGHLNA 859
Query: 382 SSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKKVPDKSF 203
+S N S TY ++ +++ I++ F +PLL+ +++F V+NYL + +++K+
Sbjct: 860 NSLFTRNNGSVTTYKKHYEERYGIQLCFDREPLLNGRRIFHVQNYLSKCRQQKQKEPSKI 919
Query: 202 NVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISSSV--KVDISTI 29
+ ELPPELC I+ + S YSF+F+PS+MHR++SLL A LK+ + V I TI
Sbjct: 920 SFELPPELCWIIMAPISLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTI 979
Query: 28 KVLEALTRK 2
KVLEA+T K
Sbjct: 980 KVLEAITTK 988
Score = 50.1 bits (118), Expect(2) = e-123
Identities = 20/54 (37%), Positives = 37/54 (68%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
+L ++ KH + +ENL+++E+ A+ +K+ K+ S LL+C+ E+G+W A A E
Sbjct: 256 ELAMIELKHTRSLENLDLNEAQAELIRKKVSKINSTLLYCLSELGVWLALKAAE 309
>gb|EXB88160.1| Endoribonuclease Dicer-2-like protein [Morus notabilis]
Length = 1429
Score = 413 bits (1062), Expect(2) = e-122
Identities = 245/680 (36%), Positives = 386/680 (56%), Gaps = 14/680 (2%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
GK ++ VK F D+ + + +LP++ W +D++ + G L+ KV L++ L
Sbjct: 322 GKVDVFGEAIVKKFSLDAFNAFKNSLPTDPNWSIINDVKLNMSTGLLTAKVFCLIELLLE 381
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+R K RCI+FV+R +T+VVI +L + + +Y+ G++ +Q ++++ Q +I+
Sbjct: 382 YRHLKDLRCIVFVQRIVTAVVIQSLLSELLPKRINWKAKYIAGSSNNMQSQTRKKQNEIV 441
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
+FR G VNIIVAT +LEEGLD+Q CN+VVR+D T+CSFIQSRGRAR K+S Y+L++
Sbjct: 442 GEFREGVVNIIVATSILEEGLDVQSCNLVVRFDPSSTVCSFIQSRGRARKKNSDYVLMIE 501
Query: 1462 DGEQLAQ--VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSV 1289
G+ Q + L + MR+ +L++ + L +Y VE TGA++T +SS+
Sbjct: 502 SGDHSTQSRLKNYLASGEIMRKESLRHASLPCEPLDSDLQEGDFYCVESTGAIMTLSSSI 561
Query: 1288 ALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLE 1109
L+Y YCS+LP D Y+K P + ++ L LP +CPI V LK++ACLE
Sbjct: 562 NLIYFYCSRLPSDGYFKPTPRWDLNTG----TLYLPKSCPIQAVSAEGNPKILKQIACLE 617
Query: 1108 ACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSK 929
ACKQLH IGAL DNL+PD++ E ED KE ++ K+ P Y+P+ VG +
Sbjct: 618 ACKQLHQIGALTDNLVPDIVVE-----EDNAKELASQPYKDEQPSYVPSEMVGSFGPADA 672
Query: 928 QTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPL 749
++ Y + +Q+ DV D +L ++ AL SDL +L +G V + ++ G L
Sbjct: 673 GVSYHCYLIELKQDFGYDVPIHDLVLCMRSALESDLANIHFDLQVGRGSVTVNLKNVGTL 732
Query: 748 ELSSHEVKLAVLFQVKIFRLLISRTVDSFD--HTNLDGSDLLNKTIMYLILPLVEDGSN- 578
L+ +V + +FQV + RLL+ D+ H+ L S+ + I YL+LP +
Sbjct: 733 SLNRDQVTWSRMFQVTLLRLLVDHKFDNLREVHSQLYFSETIQ--IDYLLLPAITMNKRP 790
Query: 577 RVDWECINKV------GCDKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILY 416
+DW+ + V C + + ++T +G + +L +++V TPH++ +Y
Sbjct: 791 LIDWKSVTSVLFSSEEFCKDHMSCPLPKGISRCIHTKNGIVCTCMLRNSLVYTPHSESVY 850
Query: 415 YVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQY 236
V IL +N S + + + TY YF +KH I + F +PL ++LF+VKNYLL +
Sbjct: 851 CVTGILEKMNGKSRLDLTDGTCTTYRKYFKEKHGINLQFCNEPLFRGRRLFRVKNYLL-H 909
Query: 235 QEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLK-SRIS 59
+E ++ + ELPPELC I+ + S LYSFSF PS+MH+IE LL A+ LK +
Sbjct: 910 REAREKESSNITDELPPELCYIIMSPISPSTLYSFSFFPSIMHQIEGLLIAASLKRMHLD 969
Query: 58 SSVK-VDISTIKVLEALTRK 2
V+ V+I T+KVLEA+T K
Sbjct: 970 HCVQNVNIPTVKVLEAITTK 989
Score = 56.6 bits (135), Expect(2) = e-122
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAA 2058
+L L+EKH +E L++D+S+A+S +K+ K+YS LLFC++E+G+W A
Sbjct: 256 QLKSLQEKHELSLEKLDLDKSAAESISKKLMKVYSALLFCLDELGVWLA 304
>ref|XP_002315119.1| hypothetical protein POPTR_0010s18870g [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| hypothetical protein
POPTR_0010s18870g [Populus trichocarpa]
Length = 1408
Score = 418 bits (1074), Expect(2) = e-122
Identities = 255/678 (37%), Positives = 390/678 (57%), Gaps = 12/678 (1%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
GK ++ VK F D+ +E D+ E V AG ++ KV L+ TL
Sbjct: 324 GKVDVSGETIVKKFCWDASLVISNCFSAECC--IGDNTEADVGAGLITAKVLCLIKTLLQ 381
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+RD K RCI+FVER IT+VV+ +L+ + + +Y+ GN + +Q ++++ Q +I+
Sbjct: 382 YRDLKDIRCIVFVERVITAVVLESLLRELLPKHSSWKTKYIAGNNSGLQSQTRQMQNEIV 441
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
E+FR G VNIIVAT +LEEGLD+Q CN+V+R+D P ++ SFIQSRGRARM++S YLL+V+
Sbjct: 442 EEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPPSSVSSFIQSRGRARMQNSDYLLMVK 501
Query: 1462 --DGEQLAQVNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSV 1289
D +++ L + MR +L+ + L + +Y+VE TGAVVT +SSV
Sbjct: 502 TEDSTTHSRLENYLSSSEIMRRESLRRSSTSCSAPQSELYEDEFYSVEGTGAVVTLSSSV 561
Query: 1288 ALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLE 1109
+L+Y YCS+LP D Y+K PI IDKE C L LP + PI + V LK+ ACLE
Sbjct: 562 SLIYFYCSRLPSDGYFKPAPICIIDKEKETCTLHLPKSSPIQNICVQGNNKNLKQKACLE 621
Query: 1108 ACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSK 929
ACKQLH IGAL DNL+PDV+ E E +E + + P+Y+P + +
Sbjct: 622 ACKQLHLIGALTDNLVPDVVEE-----EAVAQEIRNERYDDEQPIYLPPELASQ-GPRNL 675
Query: 928 QTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSD-LTKTKINLNSPKGVVRLQIQFTGP 752
+T++Y Y + Q+ V D +L+++ L SD L+ L + +G++ + +++ G
Sbjct: 676 KTKYYCYLIELNQKFDYGVPVHDIVLVMRTELESDVLSSMGFELEAERGLLAVSLRYIGD 735
Query: 751 LELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLVEDGSN- 578
+ L V L FQ+ +F +LI R V+ + L G +L +M Y +LP + S
Sbjct: 736 IYLDQVPVLLCRRFQITLFEVLIHREVNKLEEV-LKGLELGTGVVMDYFLLPAIRSRSQP 794
Query: 577 RVDWECINKVGCDKVSN---NDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVR 407
+DWE I+ V + N + + H+++T G + +L +++V TPHN +Y++
Sbjct: 795 SIDWEPISSVLFSYKNEDHFNCSSKGNAHVVHTKGGPVCTCVLQNSLVCTPHNGNVYFIT 854
Query: 406 NILRDLNASSHMLSGNLSHGTYSDYFHK-KHQIEILFKEQPLLSAKKLFKVKNYLLQYQE 230
DLN S + N S TY ++F K ++ I++LF ++PLL + +F V N+L + +
Sbjct: 855 GASEDLNGRSLLKLRNGSAITYKEHFAKRRNSIQLLFDQEPLLEGRHIFPVHNFLNRCRT 914
Query: 229 KKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISSSV 50
KK+ K+ +V+LPPELC I+ V S LYS++F+PS+MHR+ESLL A LK S
Sbjct: 915 KKEKESKNAHVDLPPELCDIILSPVSISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHC 974
Query: 49 --KVDISTIKVLEALTRK 2
VDI +KVLEA+T K
Sbjct: 975 MQNVDIPAMKVLEAITTK 992
Score = 50.1 bits (118), Expect(2) = e-122
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = -3
Query: 2192 LKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACEF 2040
LK KH ++ L++ ES+A+S KI K++S L+FC E+G+W A A F
Sbjct: 260 LKAKHELLLKQLDLSESAAESVHSKISKVHSALMFCSGELGVWLAFQAARF 310
>ref|XP_006408318.1| hypothetical protein EUTSA_v10019898mg [Eutrema salsugineum]
gi|557109464|gb|ESQ49771.1| hypothetical protein
EUTSA_v10019898mg [Eutrema salsugineum]
Length = 1390
Score = 420 bits (1079), Expect(2) = e-122
Identities = 256/695 (36%), Positives = 405/695 (58%), Gaps = 19/695 (2%)
Frame = -1
Query: 2029 QSLTNLAS---ILGKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFL 1859
QSL++ S + G+ N+ VK F D+ +P + W S +I++ ++AG L
Sbjct: 308 QSLSDSQSDFTLWGELNMFSETFVKKFCFDASQAFLADIPHGLNW-SAANIKENLEAGLL 366
Query: 1858 SLKVKRLVDTLQAFRDWKKQRCIIFVERKITSVVISKIL-QSMDCFTHLTIEYMVGNTAT 1682
+ K L+++L + + RCIIFV+R IT++V+ +L + + + +Y+ GN +
Sbjct: 367 TSKTVCLLESLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNYNSWKTKYVAGNNSG 426
Query: 1681 VQEKSQRDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGR 1502
+Q ++++ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGR
Sbjct: 427 LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGR 486
Query: 1501 ARMKDSHYLLLVRDGEQLAQVNRL---LGGEKQMREAALQNDRVKSVSKSVLLDP--ESY 1337
ARM +S YL++V G+ LA ++RL L G K+MRE +L + V LD E
Sbjct: 487 ARMLNSDYLMMVESGD-LATIDRLMKYLSGGKRMREESLHHSLVPC---QPFLDDSSEKI 542
Query: 1336 YTVEKTGAVVTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRV 1157
Y V+KTGA VT +SSV+L+Y YCS+LP D Y+K P F +DK+ G C + LP +CP+ V
Sbjct: 543 YRVDKTGASVTLSSSVSLIYFYCSRLPSDEYFKPAPRFDVDKDQGICTVYLPKSCPVKEV 602
Query: 1156 IVHECGIPLKKLACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYP 977
G LK+ AC EAC +LH GAL DNL+PD++ E+ E++ G N P
Sbjct: 603 SAPANGKMLKQAACFEACIELHRAGALTDNLVPDMVVA-----ENVEQKLGNINYNTEQP 657
Query: 976 LYIPNSFVGKWSILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLN 797
Y+P V ++S S QT ++ Y + + + + +F D L + L D+ T L
Sbjct: 658 CYLPPELVSQFSGQS-QTTYHLYLIRMKPDSRRNFQFNDIFLGTRTELEDDIGSTCFQLE 716
Query: 796 SPKGVVRLQIQFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTI 617
G + + + + G + + EV L FQ+ +FR+L+ +V++ LDG L +
Sbjct: 717 DHHGTIAVTLSYVGAFDFTQEEVLLCRKFQITLFRVLLDHSVENLMEA-LDGLHLRDGVA 775
Query: 616 M-YLILPLV-EDGSNRVDWECINKV------GCDKVSNNDC-IQNSEHLLNTGSGDISAE 464
+ YL++P E+ ++ ++W+ I V C++ + DC + + +L+T G
Sbjct: 776 LDYLLVPATPENETSLINWDMIRSVNLTRHKACER--HADCSAKGASRILHTKDGLFCTC 833
Query: 463 LLVDTVVETPHNKILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPL 284
++ + +V TPHN +Y + +L +LNA+S + + TY +++ K+H I++ ++PL
Sbjct: 834 VVENALVYTPHNGHVYCTKGVLNNLNANSVLRTRYSGDQTYVEFYEKRHGIQLNLPDEPL 893
Query: 283 LSAKKLFKVKNYLLQYQEKK-KVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMH 107
L+ + +F + NY+ ++KK K D+ F VELPPELC ++ + ++YS++F+PSVM
Sbjct: 894 LNGRHIFTLHNYIRMTKKKKEKEHDREF-VELPPELCHVILSPISVDMIYSYTFIPSVMQ 952
Query: 106 RIESLLRASQLKSRISSSVKVDISTIKVLEALTRK 2
RIESLL A LK I KV+I TIKVLEA+T K
Sbjct: 953 RIESLLIAFNLKKNIP---KVNIPTIKVLEAITTK 984
Score = 47.8 bits (112), Expect(2) = e-122
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + NL++ S+ DS E+++RK+ S L +C+ ++GIW A A +
Sbjct: 255 KLENLITKHRLSLANLDLKSSTVDSIEKRMRKIISCLTYCLSDLGIWLAQKAAQ 308
>ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata] gi|297330209|gb|EFH60628.1| hypothetical protein
ARALYDRAFT_317213 [Arabidopsis lyrata subsp. lyrata]
Length = 2033
Score = 427 bits (1097), Expect(2) = e-121
Identities = 255/678 (37%), Positives = 392/678 (57%), Gaps = 12/678 (1%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
G+ N+ VK F D+ +P+ + W S +I V+AG L+ K L++TL +
Sbjct: 968 GELNMSSVTLVKKFCSDASQAFLADIPNGLNW-SVANINGKVEAGLLTSKTVCLIETLLS 1026
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHLTIEYMVGNTATVQEKSQRDQKKI 1646
+ + RCIIFV+R IT++V+ +L + +C T +Y+ GN + +Q ++++ Q +I
Sbjct: 1027 YSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKT-KYVAGNNSGLQNQTRKKQNEI 1085
Query: 1645 IEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLV 1466
+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGRARM++S YL++V
Sbjct: 1086 VEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYLMMV 1145
Query: 1465 RDGEQLAQ--VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSS 1292
G+ L Q + + L G K+MRE +L + V D E ++ VE TGA VT +SS
Sbjct: 1146 ESGDLLTQSRLKKYLSGGKRMREESLHHSLVPCPPLPDDSD-ELFFRVESTGATVTLSSS 1204
Query: 1291 VALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACL 1112
V+L+YHYCS+LP D Y+K P F ++K+ G C L LP +CP+ V LK+ CL
Sbjct: 1205 VSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAQANNKVLKQTVCL 1264
Query: 1111 EACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILS 932
EAC QLH +GAL+D+L+PD++ + + + EK N ++ P Y P V ++S+
Sbjct: 1265 EACIQLHKVGALSDHLVPDMV---VAETVAQKLEKIQYNPEQ--PCYFPPELVSQFSV-Q 1318
Query: 931 KQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGP 752
+T ++ Y + + + D LL + L D+ T L KG + + + + G
Sbjct: 1319 PETTYHFYLIRMKPSSQRNFHLNDVLLGTRVVLEDDIGNTGFRLEDHKGTIAVTLSYVGA 1378
Query: 751 LELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLVEDG-SN 578
L+ EV L FQ+ +FR+L+ +V + L+G L + + YL++P ++
Sbjct: 1379 FHLTQEEVLLCRRFQITLFRVLLDHSVKNLMEA-LNGLLLRDGIALDYLLVPSTHSHETS 1437
Query: 577 RVDWECINKVG--CDKVSN---NDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYY 413
+DWE I V C + N I + +L+T G ++ + +V TPHN Y
Sbjct: 1438 PIDWEVIRSVNLTCHEALEKHVNCSINGASRILHTKDGLFCTCVVQNALVYTPHNGYFYC 1497
Query: 412 VRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQ 233
+ +L ++NA+S + N TY +Y+ ++H I++ F ++PLL+ + +F + NYL +
Sbjct: 1498 TKGVLNNINANSFLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHNYLHMTK 1557
Query: 232 EKK-KVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISS 56
+KK K DK F VELPPELC ++ + V+YS++F+PSVM RIESLL A LK I
Sbjct: 1558 KKKEKEHDKEF-VELPPELCHVILSPISVDVIYSYTFIPSVMQRIESLLIAYNLKKSIP- 1615
Query: 55 SVKVDISTIKVLEALTRK 2
KV+I TIKVLEA+T K
Sbjct: 1616 --KVNIPTIKVLEAITTK 1631
Score = 37.7 bits (86), Expect(2) = e-121
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + L++ S+ DS E+++ ++ S L +C++++GI A A +
Sbjct: 902 KLEKLMIKHRLSLATLDLKSSTVDSIEKRLSRISSTLTYCLDDLGILLAQKAAQ 955
>ref|XP_006428678.1| hypothetical protein CICLE_v10010911mg [Citrus clementina]
gi|557530735|gb|ESR41918.1| hypothetical protein
CICLE_v10010911mg [Citrus clementina]
Length = 1401
Score = 418 bits (1074), Expect(2) = e-121
Identities = 249/669 (37%), Positives = 391/669 (58%), Gaps = 13/669 (1%)
Frame = -1
Query: 1969 VKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCI 1790
+K F D+ +PS W DD + + +G L+ K+ LV++L +R + RCI
Sbjct: 332 MKKFGSDAFQALVTCIPSGAGWSIGDDSKFNMDSGLLTEKIVCLVESLLEYRGLEDIRCI 391
Query: 1789 IFVERKITSVVISKILQSMDCFTHLT--IEYMVGNTATVQEKSQRDQKKIIEDFRNGKVN 1616
IFVER IT++V+ +L + H T EY+ GN + +Q +S+ Q +I+E+FR G VN
Sbjct: 392 IFVERVITAIVLQSLLSEL-LPRHCTWKTEYVAGNNSGIQCQSRNKQNEIVEEFRRGLVN 450
Query: 1615 IIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQV- 1439
+IVAT +LEEGLD+Q CN+V+ +D T+CSFIQSRGRARM++S YLL+++ G+ + Q
Sbjct: 451 VIVATSILEEGLDVQSCNLVIMFDPSHTVCSFIQSRGRARMQNSDYLLMLKSGDSITQSR 510
Query: 1438 --NRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCS 1265
N L+ G+ MR+ AL + + + + E +Y VE +GA+ T +SSV L++ YCS
Sbjct: 511 LENYLVSGDT-MRKEALSHASLPCSPLNNHMYGEDFYHVESSGAIATLSSSVHLIHFYCS 569
Query: 1264 QLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLEACKQLHTI 1085
+LP D Y+K P F I+KE G C L LP NCPI VI LK+ ACLEACK+LH I
Sbjct: 570 RLPSDGYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQI 629
Query: 1084 GALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSKQTRFYGYR 905
GAL DNLLPD++ E+ D +K G + +P+Y P V + +K T ++ Y
Sbjct: 630 GALTDNLLPDIVVEE----HDAQKH-GNEPYDAEHPIYFPPELVNQCPQDTKIT-YHCYL 683
Query: 904 LSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPLELSSHEVK 725
+ +Q + D+ D +L V+ L S++ K +L +G + + ++ G ++L+ +V
Sbjct: 684 IELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVL 743
Query: 724 LAVLFQVKIFRLLISRTVDSFDHTNLDGSDLL-NKTIMYLILPLVEDGSNRVDWECINKV 548
L FQ+ +FR+++ +D + L G L N I YL+LP E +DWE + +
Sbjct: 744 LCRRFQIALFRVIMDHNLDKLNEI-LKGLRLRDNLEIDYLLLPASE---QLIDWEPVASL 799
Query: 547 G--CD---KVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNILRDLNA 383
CD K N ++ ++ T SG + ++ ++VV TPH+ +YY+ +L LNA
Sbjct: 800 SFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIHNSVVCTPHSGQIYYITGVLGHLNA 859
Query: 382 SSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKKVPDKSF 203
+S + S TY ++ +++ I++ F ++ LL+ +++F +NYL + +++K+
Sbjct: 860 NSLFTRNDGSAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKI 919
Query: 202 NVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISSSV--KVDISTI 29
+ ELPPELCRI+ + S YSF+F+PS+MHR++SLL A LK+ + V I T
Sbjct: 920 SFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS 979
Query: 28 KVLEALTRK 2
KVLEA+T K
Sbjct: 980 KVLEAITTK 988
Score = 45.8 bits (107), Expect(2) = e-121
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = -3
Query: 2183 KHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KH + +ENL+++E+ A+S + I ++ S LL+C+ +G+W A A E
Sbjct: 263 KHNRSLENLDLNEAQAESIRKNISRIKSTLLYCLNGLGVWLALKAAE 309
>ref|XP_006480490.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X3 [Citrus
sinensis] gi|568853715|ref|XP_006480491.1| PREDICTED:
endoribonuclease Dicer homolog 2-like isoform X4 [Citrus
sinensis] gi|568853717|ref|XP_006480492.1| PREDICTED:
endoribonuclease Dicer homolog 2-like isoform X5 [Citrus
sinensis]
Length = 1401
Score = 417 bits (1072), Expect(2) = e-120
Identities = 248/669 (37%), Positives = 391/669 (58%), Gaps = 13/669 (1%)
Frame = -1
Query: 1969 VKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCI 1790
+K F D+ +PS W DD + + +G L+ K+ LV++L +R + RCI
Sbjct: 332 MKKFGSDAFQALVTYIPSGAGWSIGDDSKFNMDSGLLTEKIVCLVESLLEYRGLEDIRCI 391
Query: 1789 IFVERKITSVVISKILQSMDCFTHLT--IEYMVGNTATVQEKSQRDQKKIIEDFRNGKVN 1616
IFVER +T++V+ +L + H T EY+ GN + +Q +S+ Q +I+E+FR G VN
Sbjct: 392 IFVERVVTAIVLQSLLSEL-LPRHCTWKTEYVAGNNSGIQCQSRNKQNEIVEEFRRGLVN 450
Query: 1615 IIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQV- 1439
+IVAT +LEEGLD+Q CN+V+ +D T+CSFIQSRGRARM++S YLL+++ G+ + Q
Sbjct: 451 VIVATSILEEGLDVQSCNLVIMFDPSHTVCSFIQSRGRARMQNSDYLLMLKSGDSITQSR 510
Query: 1438 --NRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCS 1265
N L+ G+ MR+ AL + + + + E +Y VE +GA+ T +SSV L++ YCS
Sbjct: 511 LENYLVSGDT-MRKEALSHASLPCSPLNNHMYGEDFYHVESSGAIATLSSSVHLIHFYCS 569
Query: 1264 QLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLEACKQLHTI 1085
+LP D Y+K P F I+KE G C L LP NCPI VI LK+ ACLEACK+LH I
Sbjct: 570 RLPSDGYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQI 629
Query: 1084 GALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSKQTRFYGYR 905
GAL DNLLPD++ E+ D +K G + +P+Y P V + +K T ++ Y
Sbjct: 630 GALTDNLLPDIVVEE----HDAQKH-GNEPYDAEHPIYFPPELVNQCPQDTKIT-YHCYL 683
Query: 904 LSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPLELSSHEVK 725
+ +Q + D+ D +L V+ L S++ K +L +G + + ++ G ++L+ +V
Sbjct: 684 IELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVL 743
Query: 724 LAVLFQVKIFRLLISRTVDSFDHTNLDGSDLL-NKTIMYLILPLVEDGSNRVDWECINKV 548
L FQ+ +FR+++ +D + L G L N I YL+LP E +DWE + +
Sbjct: 744 LCRRFQIALFRVIMDHNLDKLNEI-LKGLRLRDNLEIDYLLLPASE---QLIDWEPVASL 799
Query: 547 G--CD---KVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNILRDLNA 383
CD K N ++ ++ T SG + ++ ++VV TPH+ +YY+ +L LNA
Sbjct: 800 SFPCDIGLKHHKNCSTMSNARVIQTKSGPLCTCMIHNSVVCTPHSGQIYYITGVLGHLNA 859
Query: 382 SSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKKVPDKSF 203
+S + S TY ++ +++ I++ F ++ LL+ +++F +NYL + +++K+
Sbjct: 860 NSLFTRNDGSAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKI 919
Query: 202 NVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISSSV--KVDISTI 29
+ ELPPELCRI+ + S YSF+F+PS+MHR++SLL A LK+ + V I T
Sbjct: 920 SFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS 979
Query: 28 KVLEALTRK 2
KVLEA+T K
Sbjct: 980 KVLEAITTK 988
Score = 45.8 bits (107), Expect(2) = e-120
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = -3
Query: 2183 KHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KH + +ENL+++E+ A+S + I ++ S LL+C+ +G+W A A E
Sbjct: 263 KHNRSLENLDLNEAQAESIRKNISRIKSTLLYCLNGLGVWLALKAAE 309
>ref|XP_006480488.1| PREDICTED: endoribonuclease Dicer homolog 2-like isoform X1 [Citrus
sinensis] gi|568853711|ref|XP_006480489.1| PREDICTED:
endoribonuclease Dicer homolog 2-like isoform X2 [Citrus
sinensis]
Length = 1401
Score = 417 bits (1072), Expect(2) = e-120
Identities = 248/669 (37%), Positives = 391/669 (58%), Gaps = 13/669 (1%)
Frame = -1
Query: 1969 VKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQAFRDWKKQRCI 1790
+K F D+ +PS W DD + + +G L+ K+ LV++L +R + RCI
Sbjct: 332 MKKFGSDAFQALVTYIPSGAGWSIGDDSKFNMDSGLLTEKIVCLVESLLEYRGLEDIRCI 391
Query: 1789 IFVERKITSVVISKILQSMDCFTHLT--IEYMVGNTATVQEKSQRDQKKIIEDFRNGKVN 1616
IFVER +T++V+ +L + H T EY+ GN + +Q +S+ Q +I+E+FR G VN
Sbjct: 392 IFVERVVTAIVLQSLLSEL-LPRHCTWKTEYVAGNNSGIQCQSRNKQNEIVEEFRRGLVN 450
Query: 1615 IIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVRDGEQLAQV- 1439
+IVAT +LEEGLD+Q CN+V+ +D T+CSFIQSRGRARM++S YLL+++ G+ + Q
Sbjct: 451 VIVATSILEEGLDVQSCNLVIMFDPSHTVCSFIQSRGRARMQNSDYLLMLKSGDSITQSR 510
Query: 1438 --NRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSVALLYHYCS 1265
N L+ G+ MR+ AL + + + + E +Y VE +GA+ T +SSV L++ YCS
Sbjct: 511 LENYLVSGDT-MRKEALSHASLPCSPLNNHMYGEDFYHVESSGAIATLSSSVHLIHFYCS 569
Query: 1264 QLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLACLEACKQLHTI 1085
+LP D Y+K P F I+KE G C L LP NCPI VI LK+ ACLEACK+LH I
Sbjct: 570 RLPSDGYFKPTPKFDINKEMGICTLYLPNNCPIQTVIAQGNIKTLKQTACLEACKKLHQI 629
Query: 1084 GALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILSKQTRFYGYR 905
GAL DNLLPD++ E+ D +K G + +P+Y P V + +K T ++ Y
Sbjct: 630 GALTDNLLPDIVVEE----HDAQKH-GNEPYDAEHPIYFPPELVNQCPQDTKIT-YHCYL 683
Query: 904 LSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGPLELSSHEVK 725
+ +Q + D+ D +L V+ L S++ K +L +G + + ++ G ++L+ +V
Sbjct: 684 IELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEVDRGRLTVNLKHLGKIQLTPDKVL 743
Query: 724 LAVLFQVKIFRLLISRTVDSFDHTNLDGSDLL-NKTIMYLILPLVEDGSNRVDWECINKV 548
L FQ+ +FR+++ +D + L G L N I YL+LP E +DWE + +
Sbjct: 744 LCRRFQIALFRVIMDHNLDKLNEI-LKGLRLRDNLEIDYLLLPASE---QLIDWEPVASL 799
Query: 547 G--CD---KVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILYYVRNILRDLNA 383
CD K N ++ ++ T SG + ++ ++VV TPH+ +YY+ +L LNA
Sbjct: 800 SFPCDIGLKHHKNCSTMSNARVIQTKSGPLCTCMIHNSVVCTPHSGQIYYITGVLGHLNA 859
Query: 382 SSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQYQEKKKVPDKSF 203
+S + S TY ++ +++ I++ F ++ LL+ +++F +NYL + +++K+
Sbjct: 860 NSLFTRNDGSAITYKKHYEERYGIQLCFDQELLLNGRRIFHAQNYLSKCRQEKQREPSKI 919
Query: 202 NVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLKSRISSSV--KVDISTI 29
+ ELPPELCRI+ + S YSF+F+PS+MHR++SLL A LK+ + V I T
Sbjct: 920 SFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAVNLKNMLLDHCMQNVTIPTS 979
Query: 28 KVLEALTRK 2
KVLEA+T K
Sbjct: 980 KVLEAITTK 988
Score = 45.8 bits (107), Expect(2) = e-120
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = -3
Query: 2183 KHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KH + +ENL+++E+ A+S + I ++ S LL+C+ +G+W A A E
Sbjct: 263 KHNRSLENLDLNEAQAESIRKNISRIKSTLLYCLNGLGVWLALKAAE 309
>ref|XP_002312197.1| hypothetical protein POPTR_0008s07580g [Populus trichocarpa]
gi|222852017|gb|EEE89564.1| hypothetical protein
POPTR_0008s07580g [Populus trichocarpa]
Length = 1468
Score = 409 bits (1052), Expect(2) = e-120
Identities = 252/690 (36%), Positives = 396/690 (57%), Gaps = 26/690 (3%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
GK ++ VK+F QD+ D+I+ + AG L+ K+ LV++L
Sbjct: 373 GKLDVSGETIVKNFCQDASLAISNCFSDGQECSIGDNIKAHLGAGLLTSKILCLVESLLQ 432
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+RD K+ RCI+FVER IT++V+ +L + +Y+ GN + +Q ++++ Q +I+
Sbjct: 433 YRDLKEIRCIVFVERVITAIVLESLLSKLLPKHGSWKTKYIAGNNSGLQSQTRKIQNEIV 492
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
E+FR G VNIIVAT +LEEGLD+Q CN+V+R+D T+ SFIQSRGRARM++S YLL+V+
Sbjct: 493 EEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPSATVSSFIQSRGRARMQNSDYLLMVK 552
Query: 1462 DGEQLAQV---NRLLGGEKQMREAALQNDRVKSVSKSVLLD--PESYYTVEKTGAVVTSN 1298
G+ N L G+ RE+ R S+ S LLD + +Y VE TGAVV+ +
Sbjct: 553 RGDFSTHARLENYLASGDIMRRESL----RHASIPCSPLLDELDDEFYRVEGTGAVVSLS 608
Query: 1297 SSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPLKKLA 1118
SSV+L+Y YCS+LP D Y+K P IDKE C L LP + P+ + V LK+ A
Sbjct: 609 SSVSLIYFYCSRLPSDGYFKPAPRCIIDKETMTCTLHLPKSSPVQTICVQGNIKTLKQKA 668
Query: 1117 CLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSI 938
CLEACK+LH GAL DNL+PD++ E E ++ G + + P+Y+P V +
Sbjct: 669 CLEACKKLHVSGALTDNLVPDIVME-----EAVAEDVGNERYDDEQPIYLPPELVSR-GP 722
Query: 937 LSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTK-INLNSPKGVVRLQIQF 761
+ +T++Y Y + Q + D+ D +L+V+ L SD+ ++ +L + +G++ + +++
Sbjct: 723 RNLKTKYYCYLIELNQNFAYDIPVHDVVLVVRTELESDVIRSMGFDLEAERGLLTVNLRY 782
Query: 760 TGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDL-LNKTIMYLILPLVEDG 584
G ++L V L FQ+ +F++L+ +V+ L+G DL I Y +LP
Sbjct: 783 IGDIDLERVLVLLCRRFQITLFKVLLDHSVNKLKEV-LEGLDLGSGAEIDYFLLPAFRSC 841
Query: 583 SN-RVDWECINKV--GCDKVSNNDCIQN-SEHLLNTGSGDISAELLVDTVVETPHNKILY 416
S ++W I+ V + +C +N + H++ T G + A +L +++V TPHN +Y
Sbjct: 842 SQPSINWAPISSVLFSYKNEEHFNCSRNGNAHVVQTKCGPVCACVLQNSLVCTPHNGNIY 901
Query: 415 YVRNILRDLNASSHMLSGNLSHGTYSDYFHK------------KHQIEILFKEQPLLSAK 272
+ + DLN +S + G+ TY +YF K +H I++LF +PLL K
Sbjct: 902 CITGVFEDLNGNSLLKMGDGGAITYKEYFAKRPMSDLKLTLDFRHGIQLLFNREPLLKGK 961
Query: 271 KLFKVKNYLLQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESL 92
+F V N L + +++K+ K+ +VELPPELC I+ + S LYS++F+PS+MHR+ESL
Sbjct: 962 HIFPVHNLLNRCRKQKEKASKNTHVELPPELCEIILSPISISTLYSYTFIPSIMHRLESL 1021
Query: 91 LRASQLKSRISSSV--KVDISTIKVLEALT 8
L A LK S V+I ++KVLEA+T
Sbjct: 1022 LIAVNLKKMHSDHYLQHVNIPSMKVLEAIT 1051
Score = 53.1 bits (126), Expect(2) = e-120
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = -3
Query: 2192 LKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACEF 2040
L+ KH +E L+++ES+A S KI K++S L+FC+EE+G+W A A +F
Sbjct: 309 LRTKHEHMLEQLDLNESAAVSICNKISKVHSALMFCLEELGVWLAFQAAQF 359
>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 411 bits (1057), Expect(2) = e-120
Identities = 245/655 (37%), Positives = 371/655 (56%), Gaps = 12/655 (1%)
Frame = -1
Query: 1999 GKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRLVDTLQA 1820
G+ ++ V++F + PS W DI V AG+L+ KV L+++L
Sbjct: 321 GELDVCAQRIVRNFSLGASKVFSAHXPSGSHWSLGGDIHANVDAGYLTSKVNSLIESLLE 380
Query: 1819 FRDWKKQRCIIFVERKITSVVISKILQSM-DCFTHLTIEYMVGNTATVQEKSQRDQKKII 1643
+RD K RCIIFVER IT++V+ + + + EY G+++ +Q +S+ Q KI+
Sbjct: 381 YRDLKDLRCIIFVERIITAIVLRSLXNELLPDLSGWKTEYTAGHSSLLQSQSRNVQNKIV 440
Query: 1642 EDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDSHYLLLVR 1463
E+FR G VNIIVAT +LEEGLD+Q CN+V+R+D T+CSFIQSRGRARM++SH++L+V
Sbjct: 441 EEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQNSHFILMVG 500
Query: 1462 DGEQ--LAQVNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAVVTSNSSV 1289
G+ L ++ + + MR+ +L++ + L E YY VE TGAVVT +SSV
Sbjct: 501 SGDASTLTRMQNYMQSGEIMRQESLRHASIPCSPLDDELHDEPYYKVETTGAVVTLSSSV 560
Query: 1288 ALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIP-LKKLACL 1112
+LLY YCS+LP D YYK P I+KE C L LP NCP+ +VI + LK+LACL
Sbjct: 561 SLLYFYCSRLPSDGYYKPSPRCAIEKETETCTLYLPKNCPLQKVISVKGNTKILKQLACL 620
Query: 1111 EACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVGKWSILS 932
EACK+LH GAL DNL+PD++ E E KE G + + Y P V +
Sbjct: 621 EACKELHREGALTDNLVPDIVEE-----EAIIKELGCQIYTDEELKYFPPELVSHCAN-D 674
Query: 931 KQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQIQFTGP 752
+ +Y Y + Q + S + +L V+ L D + +L+ KG + +Q+ ++G
Sbjct: 675 TEAVYYCYEVDLQHDSYSSYQLCGIILAVRTRLKFDDERLTFDLDVDKGSLLVQVNYSGV 734
Query: 751 LELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLVEDGSN- 578
+ L+S EV FQV +FR+L+ R + + + + YL+LP + N
Sbjct: 735 VRLTSEEVLRCQRFQVSLFRILLDRDLSKLEDALAAVQLPVGSAVSDYLLLPSLGSTQNP 794
Query: 577 RVDWECINKVGC------DKVSNNDCIQNSEHLLNTGSGDISAELLVDTVVETPHNKILY 416
+++WEC+N V DK + Q + +NT +G + + +L +++V TPHN +Y
Sbjct: 795 QINWECVNSVLFPSQVLGDKHIDCCSTQGRKRSVNTKTGVVCSCMLENSLVCTPHNGYVY 854
Query: 415 YVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKNYLLQY 236
+ L +L+ +S + TY +Y+ K+H+I + F + LL K +FKV NYL +
Sbjct: 855 CITGFLDNLDCNSLLEQRTGESITYIEYYKKRHRINLCFDGEQLLRGKHIFKVHNYLQRC 914
Query: 235 QEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQLK 71
+ +K +VELPPELC I+ V S L+++S+LPSVMHR+ESL+ AS LK
Sbjct: 915 RSQKAKDSTESSVELPPELCSIIMSPVSISTLFTYSYLPSVMHRVESLIMASNLK 969
Score = 48.9 bits (115), Expect(2) = e-120
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = -3
Query: 2201 LYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACEF 2040
L LK+K+ I + + SA SA +++ KLYS +FC+ E+G+W A A EF
Sbjct: 256 LIRLKDKYEDSISKSSLSDLSAGSAXKRLSKLYSSFIFCLSELGVWLAFKAAEF 309
>gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
Length = 2042
Score = 416 bits (1070), Expect(2) = e-118
Identities = 248/684 (36%), Positives = 392/684 (57%), Gaps = 12/684 (1%)
Frame = -1
Query: 2017 NLASILGKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRL 1838
N + + G+ N+ VK F D+ +P + W S +I +AG L+LK L
Sbjct: 971 NDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW-SVANINGNAEAGLLTLKTVCL 1029
Query: 1837 VDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHLTIEYMVGNTATVQEKSQ 1664
++TL + + RCIIFV+R IT++V+ +L + +C T +Y+ GN + +Q +++
Sbjct: 1030 IETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKT-KYVAGNNSGLQNQTR 1088
Query: 1663 RDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDS 1484
+ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGRARM++S
Sbjct: 1089 KKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNS 1148
Query: 1483 HYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAV 1310
YL++V G+ L Q + + L G K+MRE +L + V D E + VE TGA
Sbjct: 1149 DYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSD-EPLFRVESTGAT 1207
Query: 1309 VTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPL 1130
VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C L LP +CP+ V L
Sbjct: 1208 VTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVL 1267
Query: 1129 KKLACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVG 950
K+ CL+AC QLH +GAL+D+L+PD++ + + + EK N ++ P Y P V
Sbjct: 1268 KQAVCLKACIQLHKVGALSDHLVPDMV---VAETVSQKLEKIQYNTEQ--PCYFPPELVS 1322
Query: 949 KWSILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQ 770
++S +T ++ Y + + + D LL + L D+ T L +G + +
Sbjct: 1323 QFS-AQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVT 1381
Query: 769 IQFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLV 593
+ + G L+ EV FQ+ +FR+L+ +V++ L+G L + + YL++P
Sbjct: 1382 LSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEA-LNGLHLRDGVALDYLLVPST 1440
Query: 592 ED-GSNRVDWECINKVGCDK----VSNNDCIQN-SEHLLNTGSGDISAELLVDTVVETPH 431
++ +DWE I V + +C N + +L+T G ++ + +V TPH
Sbjct: 1441 HSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPH 1500
Query: 430 NKILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKN 251
N +Y + +L +LN +S + N TY +Y+ ++H I++ F ++PLL+ + +F + +
Sbjct: 1501 NGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHS 1560
Query: 250 YL-LQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQL 74
YL + ++K+K D+ F VELPPELC ++ + ++YS++F+PSVM RIESLL A L
Sbjct: 1561 YLHMAKKKKEKEHDREF-VELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNL 1619
Query: 73 KSRISSSVKVDISTIKVLEALTRK 2
K I KV+I TIKVLEA+T K
Sbjct: 1620 KKSIP---KVNIPTIKVLEAITTK 1640
Score = 38.1 bits (87), Expect(2) = e-118
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + L+++ S+ DS E+++ ++ S L +C++++GI A A +
Sbjct: 911 KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQ 964
>ref|NP_566199.4| endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| endoribonuclease
Dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName:
Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| endoribonuclease Dicer-like 2
[Arabidopsis thaliana] gi|332640405|gb|AEE73926.1|
endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 416 bits (1070), Expect(2) = e-118
Identities = 248/684 (36%), Positives = 392/684 (57%), Gaps = 12/684 (1%)
Frame = -1
Query: 2017 NLASILGKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRL 1838
N + + G+ N+ VK F D+ +P + W S +I +AG L+LK L
Sbjct: 317 NDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW-SVANINGNAEAGLLTLKTVCL 375
Query: 1837 VDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHLTIEYMVGNTATVQEKSQ 1664
++TL + + RCIIFV+R IT++V+ +L + +C T +Y+ GN + +Q +++
Sbjct: 376 IETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKT-KYVAGNNSGLQNQTR 434
Query: 1663 RDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDS 1484
+ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGRARM++S
Sbjct: 435 KKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNS 494
Query: 1483 HYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAV 1310
YL++V G+ L Q + + L G K+MRE +L + V D E + VE TGA
Sbjct: 495 DYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSD-EPLFRVESTGAT 553
Query: 1309 VTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPL 1130
VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C L LP +CP+ V L
Sbjct: 554 VTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVL 613
Query: 1129 KKLACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVG 950
K+ CL+AC QLH +GAL+D+L+PD++ + + + EK N ++ P Y P V
Sbjct: 614 KQAVCLKACIQLHKVGALSDHLVPDMV---VAETVSQKLEKIQYNTEQ--PCYFPPELVS 668
Query: 949 KWSILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQ 770
++S +T ++ Y + + + D LL + L D+ T L +G + +
Sbjct: 669 QFS-AQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVT 727
Query: 769 IQFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLV 593
+ + G L+ EV FQ+ +FR+L+ +V++ L+G L + + YL++P
Sbjct: 728 LSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEA-LNGLHLRDGVALDYLLVPST 786
Query: 592 ED-GSNRVDWECINKVGCDK----VSNNDCIQN-SEHLLNTGSGDISAELLVDTVVETPH 431
++ +DWE I V + +C N + +L+T G ++ + +V TPH
Sbjct: 787 HSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPH 846
Query: 430 NKILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKN 251
N +Y + +L +LN +S + N TY +Y+ ++H I++ F ++PLL+ + +F + +
Sbjct: 847 NGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHS 906
Query: 250 YL-LQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQL 74
YL + ++K+K D+ F VELPPELC ++ + ++YS++F+PSVM RIESLL A L
Sbjct: 907 YLHMAKKKKEKEHDREF-VELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNL 965
Query: 73 KSRISSSVKVDISTIKVLEALTRK 2
K I KV+I TIKVLEA+T K
Sbjct: 966 KKSIP---KVNIPTIKVLEAITTK 986
Score = 38.1 bits (87), Expect(2) = e-118
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + L+++ S+ DS E+++ ++ S L +C++++GI A A +
Sbjct: 257 KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQ 310
>gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 416 bits (1070), Expect(2) = e-118
Identities = 248/684 (36%), Positives = 392/684 (57%), Gaps = 12/684 (1%)
Frame = -1
Query: 2017 NLASILGKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRL 1838
N + + G+ N+ VK F D+ +P + W S +I +AG L+LK L
Sbjct: 315 NDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW-SVANINGNAEAGLLTLKTVCL 373
Query: 1837 VDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHLTIEYMVGNTATVQEKSQ 1664
++TL + + RCIIFV+R IT++V+ +L + +C T +Y+ GN + +Q +++
Sbjct: 374 IETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKT-KYVAGNNSGLQNQTR 432
Query: 1663 RDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDS 1484
+ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGRARM++S
Sbjct: 433 KKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNS 492
Query: 1483 HYLLLVRDGEQLAQVN--RLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAV 1310
YL++V G+ L Q + L G K+MRE +L + V D E + VE TGA
Sbjct: 493 DYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHSLVPCPPLPDDSD-EPLFRVESTGAT 551
Query: 1309 VTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPL 1130
VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C L LP +CP+ V L
Sbjct: 552 VTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVL 611
Query: 1129 KKLACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVG 950
K+ CL+AC QLH +GAL+D+L+PD++ + + + EK N ++ P Y P V
Sbjct: 612 KQAVCLKACIQLHKVGALSDHLVPDMV---VAETVSQKLEKIQYNTEQ--PCYFPPELVS 666
Query: 949 KWSILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQ 770
++S +T ++ Y + + ++ D LL + L D+ T L +G + +
Sbjct: 667 QFS-AQPETTYHFYLIRMKPNSPRNLHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVT 725
Query: 769 IQFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLV 593
+ + G L+ EV FQ+ +FR+L+ +V++ L+G L + + YL++P
Sbjct: 726 LSYVGAFHLTREEVLFCRRFQITLFRVLLDHSVENLMEA-LNGLHLRDGVALDYLLVPST 784
Query: 592 ED-GSNRVDWECINKVGCDK----VSNNDCIQN-SEHLLNTGSGDISAELLVDTVVETPH 431
++ +DWE I V + +C N + +L+T G ++ + +V TPH
Sbjct: 785 HSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPH 844
Query: 430 NKILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKN 251
N +Y + +L +LN +S + N TY +Y+ ++H I++ F ++PLL+ + +F + +
Sbjct: 845 NGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHS 904
Query: 250 YL-LQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQL 74
YL + ++K+K D+ F VELPPELC ++ + ++YS++F+PSVM RIESLL A L
Sbjct: 905 YLHMAKKKKEKEHDREF-VELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNL 963
Query: 73 KSRISSSVKVDISTIKVLEALTRK 2
K I KV+I TIKVLEA+T K
Sbjct: 964 KKSIP---KVNIPTIKVLEAITTK 984
Score = 38.1 bits (87), Expect(2) = e-118
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + L+++ S+ DS E+++ ++ S L +C++++GI A A +
Sbjct: 255 KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQ 308
>ref|NP_001078101.1| endoribonuclease Dicer-like 2 [Arabidopsis thaliana]
gi|332640404|gb|AEE73925.1| endoribonuclease Dicer-like 2
[Arabidopsis thaliana]
Length = 1374
Score = 416 bits (1070), Expect(2) = e-118
Identities = 248/684 (36%), Positives = 392/684 (57%), Gaps = 12/684 (1%)
Frame = -1
Query: 2017 NLASILGKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRL 1838
N + + G+ N+ VK F D+ +P + W S +I +AG L+LK L
Sbjct: 303 NDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW-SVANINGNAEAGLLTLKTVCL 361
Query: 1837 VDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHLTIEYMVGNTATVQEKSQ 1664
++TL + + RCIIFV+R IT++V+ +L + +C T +Y+ GN + +Q +++
Sbjct: 362 IETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKT-KYVAGNNSGLQNQTR 420
Query: 1663 RDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDS 1484
+ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGRARM++S
Sbjct: 421 KKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNS 480
Query: 1483 HYLLLVRDGEQLAQ--VNRLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAV 1310
YL++V G+ L Q + + L G K+MRE +L + V D E + VE TGA
Sbjct: 481 DYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSD-EPLFRVESTGAT 539
Query: 1309 VTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPL 1130
VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C L LP +CP+ V L
Sbjct: 540 VTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVL 599
Query: 1129 KKLACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVG 950
K+ CL+AC QLH +GAL+D+L+PD++ + + + EK N ++ P Y P V
Sbjct: 600 KQAVCLKACIQLHKVGALSDHLVPDMV---VAETVSQKLEKIQYNTEQ--PCYFPPELVS 654
Query: 949 KWSILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQ 770
++S +T ++ Y + + + D LL + L D+ T L +G + +
Sbjct: 655 QFS-AQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVT 713
Query: 769 IQFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLV 593
+ + G L+ EV FQ+ +FR+L+ +V++ L+G L + + YL++P
Sbjct: 714 LSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVENLMEA-LNGLHLRDGVALDYLLVPST 772
Query: 592 ED-GSNRVDWECINKVGCDK----VSNNDCIQN-SEHLLNTGSGDISAELLVDTVVETPH 431
++ +DWE I V + +C N + +L+T G ++ + +V TPH
Sbjct: 773 HSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPH 832
Query: 430 NKILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKN 251
N +Y + +L +LN +S + N TY +Y+ ++H I++ F ++PLL+ + +F + +
Sbjct: 833 NGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHS 892
Query: 250 YL-LQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQL 74
YL + ++K+K D+ F VELPPELC ++ + ++YS++F+PSVM RIESLL A L
Sbjct: 893 YLHMAKKKKEKEHDREF-VELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNL 951
Query: 73 KSRISSSVKVDISTIKVLEALTRK 2
K I KV+I TIKVLEA+T K
Sbjct: 952 KKSIP---KVNIPTIKVLEAITTK 972
Score = 38.1 bits (87), Expect(2) = e-118
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + L+++ S+ DS E+++ ++ S L +C++++GI A A +
Sbjct: 243 KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQ 296
>gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
Length = 1374
Score = 416 bits (1070), Expect(2) = e-118
Identities = 248/684 (36%), Positives = 392/684 (57%), Gaps = 12/684 (1%)
Frame = -1
Query: 2017 NLASILGKKNIIVTNAVKHFLQDSLSTCQQALPSEMTWHSEDDIEKAVKAGFLSLKVKRL 1838
N + + G+ N+ VK F D+ +P + W S +I +AG L+LK L
Sbjct: 303 NDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW-SVANINGNAEAGLLTLKTVCL 361
Query: 1837 VDTLQAFRDWKKQRCIIFVERKITSVVISKILQSM--DCFTHLTIEYMVGNTATVQEKSQ 1664
++TL + + RCIIFV+R IT++V+ +L + +C T +Y+ GN + +Q +++
Sbjct: 362 IETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKT-KYVAGNNSGLQNQTR 420
Query: 1663 RDQKKIIEDFRNGKVNIIVATQVLEEGLDIQGCNIVVRYDLPKTICSFIQSRGRARMKDS 1484
+ Q +I+EDFR G VNIIVAT +LEEGLD+Q CN+V+R+D ICSFIQSRGRARM++S
Sbjct: 421 KKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNS 480
Query: 1483 HYLLLVRDGEQLAQVN--RLLGGEKQMREAALQNDRVKSVSKSVLLDPESYYTVEKTGAV 1310
YL++V G+ L Q + L G K+MRE +L + V D E + VE TGA
Sbjct: 481 DYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHSLVPCPPLPDDSD-EPLFRVESTGAT 539
Query: 1309 VTSNSSVALLYHYCSQLPCDRYYKSQPIFQIDKEGGQCLLKLPTNCPIPRVIVHECGIPL 1130
VT +SSV+L+YHYCS+LP D Y+K P F ++K+ G C L LP +CP+ V L
Sbjct: 540 VTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGSCTLYLPKSCPVKEVKAEANNKVL 599
Query: 1129 KKLACLEACKQLHTIGALNDNLLPDVIHEDINDYEDGEKEKGTKNQKESYPLYIPNSFVG 950
K+ CL+AC QLH +GAL+D+L+PD++ + + + EK N ++ P Y P V
Sbjct: 600 KQAVCLKACIQLHKVGALSDHLVPDMV---VAETVSQKLEKIQYNTEQ--PCYFPPELVS 654
Query: 949 KWSILSKQTRFYGYRLSFQQEVSSDVRFRDTLLLVKEALGSDLTKTKINLNSPKGVVRLQ 770
++S +T ++ Y + + ++ D LL + L D+ T L +G + +
Sbjct: 655 QFS-AQPETTYHFYLIRMKPNSPRNLHLNDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVT 713
Query: 769 IQFTGPLELSSHEVKLAVLFQVKIFRLLISRTVDSFDHTNLDGSDLLNKTIM-YLILPLV 593
+ + G L+ EV FQ+ +FR+L+ +V++ L+G L + + YL++P
Sbjct: 714 LSYVGAFHLTREEVLFCRRFQITLFRVLLDHSVENLMEA-LNGLHLRDGVALDYLLVPST 772
Query: 592 ED-GSNRVDWECINKVGCDK----VSNNDCIQN-SEHLLNTGSGDISAELLVDTVVETPH 431
++ +DWE I V + +C N + +L+T G ++ + +V TPH
Sbjct: 773 HSHETSLIDWEVIRSVNLTSHEVLEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPH 832
Query: 430 NKILYYVRNILRDLNASSHMLSGNLSHGTYSDYFHKKHQIEILFKEQPLLSAKKLFKVKN 251
N +Y + +L +LN +S + N TY +Y+ ++H I++ F ++PLL+ + +F + +
Sbjct: 833 NGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHS 892
Query: 250 YL-LQYQEKKKVPDKSFNVELPPELCRIVCFGVPESVLYSFSFLPSVMHRIESLLRASQL 74
YL + ++K+K D+ F VELPPELC ++ + ++YS++F+PSVM RIESLL A L
Sbjct: 893 YLHMAKKKKEKEHDREF-VELPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNL 951
Query: 73 KSRISSSVKVDISTIKVLEALTRK 2
K I KV+I TIKVLEA+T K
Sbjct: 952 KKSIP---KVNIPTIKVLEAITTK 972
Score = 38.1 bits (87), Expect(2) = e-118
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = -3
Query: 2204 KLYYLKEKHMQFIENLEMDESSADSAERKIRKLYSLLLFCIEEMGIWAAAIACE 2043
KL L KH + L+++ S+ DS E+++ ++ S L +C++++GI A A +
Sbjct: 243 KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQ 296