BLASTX nr result
ID: Ephedra26_contig00019800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00019800
(1468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77866.1| unknown [Picea sitchensis] 459 e-126
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik... 404 e-110
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [... 398 e-108
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik... 398 e-108
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ... 395 e-107
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [... 392 e-106
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin... 390 e-106
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi... 390 e-106
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula] 388 e-105
ref|XP_006858556.1| hypothetical protein AMTR_s00071p00170380 [A... 386 e-104
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu... 385 e-104
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr... 384 e-104
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus... 383 e-104
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ... 381 e-103
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop... 380 e-103
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g... 380 e-103
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana] 380 e-103
ref|XP_002331109.1| predicted protein [Populus trichocarpa] 380 e-103
ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Caps... 380 e-102
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ... 380 e-102
>gb|ADE77866.1| unknown [Picea sitchensis]
Length = 382
Score = 459 bits (1182), Expect = e-126
Identities = 236/357 (66%), Positives = 270/357 (75%), Gaps = 4/357 (1%)
Frame = +1
Query: 91 GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHAL 270
GVQRYLVA++Y GTNFAG QKQP RTVQGVLEDAF KF+GQPVSS SSRTD GVHAL
Sbjct: 27 GVQRYLVAVDYIGTNFAGMQKQPN-FRTVQGVLEDAFNKFIGQPVSSASSSRTDAGVHAL 85
Query: 271 MNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFR 450
NV HVD+ERISKR PGEVLPPHEP+VV++AVNHFLQK GD+ I+DV+ VPM FHAR+R
Sbjct: 86 TNVCHVDVERISKRKPGEVLPPHEPEVVKRAVNHFLQKDAGDISIIDVRFVPMTFHARYR 145
Query: 451 AQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQA 630
AQERTY+YRILSG++PLS+FEKD+AWHV EDL L MQEAC++LVGHHDFSSFRA+GCQA
Sbjct: 146 AQERTYYYRILSGKEPLSIFEKDRAWHVPEDLGLSCMQEACKVLVGHHDFSSFRASGCQA 205
Query: 631 KSPIKTLDELFVCEMPTWPNFSPCM----TANASAAVERKVSISTTERIGDSDSSAVVER 798
KSPIK LDEL VCEMP WP F + N SA + VS +E D+ +E
Sbjct: 206 KSPIKILDELRVCEMPAWPAFPMSIDRTSRVNISATSCKHVS---SEGKASFDNPVEMEG 262
Query: 799 NRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLL 978
F +LCQ NG+ FG ++GHRGYVVVARA+SFLYHQVRLL
Sbjct: 263 QVSLSKERFMNHGQPDMLCQEENGNFGQDEVLEFGHRRGHRGYVVVARAQSFLYHQVRLL 322
Query: 979 VGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYDFRCDETEKSND 1149
VGTLK VGTGK+S DDVE ILKARTIT APPMAP+CGLYLA VKYDF C++ + D
Sbjct: 323 VGTLKCVGTGKLSVDDVESILKARTITVAPPMAPACGLYLAAVKYDFSCNDVNQMED 379
>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
arietinum]
Length = 374
Score = 404 bits (1037), Expect = e-110
Identities = 213/349 (61%), Positives = 254/349 (72%), Gaps = 8/349 (2%)
Frame = +1
Query: 94 VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALM 273
+QRYLVAIEY GT+F+GSQKQ T RTV GVLE+AF KFVGQPVS + SSRTD GVHAL
Sbjct: 54 IQRYLVAIEYIGTHFSGSQKQLTD-RTVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALS 112
Query: 274 NVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRA 453
NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQK GDLM++DV+ VP DFHAR++A
Sbjct: 113 NVCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKA 172
Query: 454 QERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAK 633
QERTYFYR+LSG +PLS EKD+AWHV E+L+LP MQEACR+LVGHHDFSSFRAAGCQAK
Sbjct: 173 QERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSSFRAAGCQAK 232
Query: 634 SPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSI--------STTERIGDSDSSAV 789
SPI+TLDEL V E+ P F M ER++ + S E + SSA
Sbjct: 233 SPIRTLDELSVVEVIQSPYFPSVMDR------ERQIKVADDLHGCGSNAEAVIPVSSSAR 286
Query: 790 VERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQV 969
+++ R + + G GFG+++ HR VV ARAR+FLYHQV
Sbjct: 287 IDKVRASNE------------------------GVGFGKRRYHRCLVVTARARAFLYHQV 322
Query: 970 RLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYD 1116
RLLVG LK+VGTG ++ DVE+IL A+T+T+A PMAP+CGLYL EVKYD
Sbjct: 323 RLLVGVLKAVGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYD 371
>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
Length = 374
Score = 398 bits (1023), Expect = e-108
Identities = 215/368 (58%), Positives = 260/368 (70%)
Frame = +1
Query: 25 EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 204
+E ++D + + ++ P +QRYLVAIEY GT F+GSQ+QP RTV GVLE+AF
Sbjct: 30 QEEEEEDKQQQESSMSKNPR---IQRYLVAIEYIGTRFSGSQQQPNC-RTVVGVLEEAFL 85
Query: 205 KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 384
KF+GQPVS SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQK
Sbjct: 86 KFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQK 145
Query: 385 AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 564
+ GD+ ++DV+ VP DFHAR++AQERTYFYR+LSG +PLS FEK++AWHV E LDL MQ
Sbjct: 146 SEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQ 205
Query: 565 EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 744
EAC++LVGHHDFSSFRAAGCQAKSPI+TLDEL V E P P F + E+K +
Sbjct: 206 EACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYF--------PSISEKKQN 257
Query: 745 ISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRG 924
S+TE DS + + D+ D G S GI GFG ++ H
Sbjct: 258 NSSTE---DSHACSREPEIDLPIDSFSNSDDEVG---------SNGITDLGFGIRRRHHC 305
Query: 925 YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAE 1104
YVV ARARSFLYHQVRLLVG LK VGTG+++ DVE+IL A+T+T+A PMAP+ GLYL
Sbjct: 306 YVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAYGLYLGC 365
Query: 1105 VKYDFRCD 1128
VKYD D
Sbjct: 366 VKYDLPRD 373
>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
vesca]
Length = 350
Score = 398 bits (1023), Expect = e-108
Identities = 216/379 (56%), Positives = 261/379 (68%), Gaps = 8/379 (2%)
Frame = +1
Query: 4 EQTKRSLEEPNKDDHYLSKLART-----QEPPMS---GVQRYLVAIEYDGTNFAGSQKQP 159
E K SLE ++ SK+++T + MS G+QRYL+AIEY GT F+GSQ+Q
Sbjct: 3 ENLKHSLESRSQSPKRPSKISKTTSEEAEAESMSKPQGIQRYLIAIEYIGTRFSGSQQQ- 61
Query: 160 TTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPH 339
+ RTV GVLE+AF KF+GQPVS SSRTD GVHAL NV HVD+ERISKR PGEVLPPH
Sbjct: 62 SNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPH 121
Query: 340 EPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKD 519
EP VV++AVNHFLQK GD+M+VDV+ VP DFHARF+AQERTYFYR+LSG +PLS FEKD
Sbjct: 122 EPIVVQRAVNHFLQKNEGDVMVVDVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEKD 181
Query: 520 KAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSP 699
+AWH+ E+LD+ MQEAC+ILVGHHDFSSFRAAGCQAKSPI+TLDEL V E+ + PNF P
Sbjct: 182 RAWHIPEELDVLAMQEACKILVGHHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNF-P 240
Query: 700 CMTANASAAVERKVSISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSL 879
+ V++ + + N +A NGG
Sbjct: 241 TIAERTRNLVQKDIQCT------------------NNPEADCHSSFNGG----------- 271
Query: 880 GINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTIT 1059
GFG +K HR VV ARAR+FLYHQVRLLVG LK VGTG + DVE+IL A+T+T
Sbjct: 272 --TDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPDVERILNAKTVT 329
Query: 1060 SAPPMAPSCGLYLAEVKYD 1116
+A PMAP+CGLYL V+YD
Sbjct: 330 AASPMAPACGLYLGHVRYD 348
>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
Length = 369
Score = 395 bits (1014), Expect = e-107
Identities = 215/347 (61%), Positives = 249/347 (71%), Gaps = 2/347 (0%)
Frame = +1
Query: 82 PMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGV 261
P +G+QRYLVAIEY GT F+GSQKQ +RTV G LE+AF+KFVGQPVS SSRTD GV
Sbjct: 44 PRNGIQRYLVAIEYIGTLFSGSQKQ-LNVRTVVGALEEAFSKFVGQPVSVSCSSRTDAGV 102
Query: 262 HALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHA 441
HAL NV HVD++RISKR PGEVLPPHEP VV +AVNHFLQK DLM++DV+ VP DFHA
Sbjct: 103 HALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHA 162
Query: 442 RFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAG 621
RF+AQERTYFYR+LSG +PLS FEKD+AWHV E+L LP MQEACR+LVG HDFSSFRAAG
Sbjct: 163 RFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAG 222
Query: 622 CQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAVVERN 801
CQAKSPI+TLDEL V E+ P F M KVS GD S
Sbjct: 223 CQAKSPIRTLDELSVNEVIESPYFPSLMDREQ----HNKVS-------GDLRSC------ 265
Query: 802 RENFDATFTERDNGGILCQNPNGDSL--GINGCGFGRKKGHRGYVVVARARSFLYHQVRL 975
+ TE D I NP+ D + GFG+++ HR VV ARARSFLYHQVRL
Sbjct: 266 -----SNNTETDIPPI--SNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRL 318
Query: 976 LVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYD 1116
LVG LK+ GTG ++ DVE+IL A+T+T+A PMAP+CGLYL EVKYD
Sbjct: 319 LVGVLKAAGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYD 365
>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
Length = 373
Score = 392 bits (1006), Expect = e-106
Identities = 214/368 (58%), Positives = 258/368 (70%)
Frame = +1
Query: 25 EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 204
+E ++D + + ++ P +QRYLVAIEY GT F+GSQ+QP RTV GVLE+AF
Sbjct: 30 QEEEEEDKQQQESSMSKNPR---IQRYLVAIEYIGTRFSGSQQQPNC-RTVVGVLEEAFL 85
Query: 205 KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 384
KF+GQPVS SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQ
Sbjct: 86 KFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQS 145
Query: 385 AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 564
G D+ ++DV+ VP DFHAR++AQERTYFYR+LSG +PLS FEK++AWHV E LDL MQ
Sbjct: 146 EG-DITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQ 204
Query: 565 EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 744
EAC++LVGHHDFSSFRAAGCQAKSPI+TLDEL V E P P F + E+K +
Sbjct: 205 EACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYF--------PSISEKKQN 256
Query: 745 ISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRG 924
S+TE DS + + D+ D G S GI GFG ++ H
Sbjct: 257 NSSTE---DSHACSREPEIDLPIDSFSNSDDEVG---------SNGITDLGFGIRRRHHC 304
Query: 925 YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAE 1104
YVV ARARSFLYHQVRLLVG LK VGTG+++ DVE+IL A+T+T+A PMAP+ GLYL
Sbjct: 305 YVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAYGLYLGC 364
Query: 1105 VKYDFRCD 1128
VKYD D
Sbjct: 365 VKYDLPRD 372
>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
gi|255637177|gb|ACU18919.1| unknown [Glycine max]
Length = 370
Score = 390 bits (1002), Expect = e-106
Identities = 213/347 (61%), Positives = 246/347 (70%), Gaps = 2/347 (0%)
Frame = +1
Query: 82 PMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGV 261
P +G+QRYLVAIEY GT F+GSQKQ +RTV GVLE+AF+KFVGQPVS SSRT GV
Sbjct: 45 PRNGIQRYLVAIEYIGTRFSGSQKQ-LNVRTVVGVLEEAFSKFVGQPVSVSCSSRTVAGV 103
Query: 262 HALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHA 441
HAL NV HVD++RISKR PGEVL PHEP VV +AVNHFLQK DLM++DV+ VP DFHA
Sbjct: 104 HALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVPSDFHA 163
Query: 442 RFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAG 621
RF+AQER YFYR+LSG +PLS FEKD+AWHV E+L LP MQEACR+LVG HDFSSFRAAG
Sbjct: 164 RFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSFRAAG 223
Query: 622 CQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAVVERN 801
CQAKSPI+TLDEL V E+ P F M KVS GD S N
Sbjct: 224 CQAKSPIRTLDELSVNEVIESPYFPSLMDREQ----HNKVS-------GDLRSCP----N 268
Query: 802 RENFDATFTERDNGGILCQNPNGDSL--GINGCGFGRKKGHRGYVVVARARSFLYHQVRL 975
D T NP+ D + GFG+++ HR VV ARAR+FLYHQVRL
Sbjct: 269 NSETDIPPT---------SNPSIDKVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRL 319
Query: 976 LVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYD 1116
LVG LK+VGTG ++ DVE+IL ART+T+A PMAP+CGLYL EVKYD
Sbjct: 320 LVGVLKAVGTGNLTIPDVERILNARTVTAASPMAPACGLYLGEVKYD 366
>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
gi|297739525|emb|CBI29707.3| unnamed protein product
[Vitis vinifera]
Length = 380
Score = 390 bits (1002), Expect = e-106
Identities = 214/369 (57%), Positives = 257/369 (69%), Gaps = 4/369 (1%)
Frame = +1
Query: 22 LEEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAF 201
L + + D SK TQ P VQRYLVA+EY GT F+GSQ+Q RTV G L++AF
Sbjct: 41 LSDGEQQDSVASK-TMTQNPR---VQRYLVAVEYIGTRFSGSQQQ-LNCRTVAGALQEAF 95
Query: 202 TKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQ 381
KF+GQPVS SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQ
Sbjct: 96 HKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQ 155
Query: 382 KAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKM 561
K GD+M++DV+ VP DFHAR++A+ERTYFYR+LSG +PLS FEKD+AWHV EDLDL M
Sbjct: 156 KNEGDVMVIDVRCVPPDFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAM 215
Query: 562 QEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANA--SAAVER 735
Q+ACR+LVG HDFSSFRAAGCQAKSPI+TLDEL V E+ P F P +T A + E
Sbjct: 216 QKACRVLVGCHDFSSFRAAGCQAKSPIRTLDELCVSEVLPTPYF-PSITERAQNNFTEEN 274
Query: 736 KVSISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGC--GFGRK 909
++ S + DS S+A N + D G NG GFG +
Sbjct: 275 PLACSNNAEVPDSPSTA----NHDRLD---------------------GFNGAGQGFGVR 309
Query: 910 KGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCG 1089
+ HR ++V ARARSFLYHQVRLLVG +K VGTG ++ DVE+IL A+T+T+A PMAP+CG
Sbjct: 310 RRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAASPMAPACG 369
Query: 1090 LYLAEVKYD 1116
LYL V YD
Sbjct: 370 LYLGNVNYD 378
>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
Length = 361
Score = 388 bits (997), Expect = e-105
Identities = 207/370 (55%), Positives = 257/370 (69%), Gaps = 6/370 (1%)
Frame = +1
Query: 25 EEPNKDDHYLSKLARTQEPPMSG-----VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVL 189
EE + +++ SK+++ +E +QRYLVA+EY GT F G QKQ T RTV GVL
Sbjct: 13 EECSDNNNRPSKISKIEEEMNQHHHHRKIQRYLVAVEYIGTRFFGFQKQLTD-RTVAGVL 71
Query: 190 EDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVN 369
EDAF KFVGQPVS + SSRTD GVHAL NV HVD+ERISKR PGEVL PHEP VVR+AVN
Sbjct: 72 EDAFCKFVGQPVSVVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVN 131
Query: 370 HFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLD 549
HFLQK GDL ++DV+ VP DFHAR++AQERTYFYR+LSG + LS FEKD+AWH+ E+L+
Sbjct: 132 HFLQKENGDLAVIDVRCVPSDFHARYKAQERTYFYRLLSGPETLSTFEKDRAWHIPEELN 191
Query: 550 LPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAV 729
LP MQEAC++LVGHHDFSSFRA+GCQAKSPI++LDEL V E+ P F M
Sbjct: 192 LPAMQEACKVLVGHHDFSSFRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDR------ 245
Query: 730 ERKVSISTTERIGDSDSSAVVE-RNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGR 906
E ++++ S+S V+ + D +++ GFG+
Sbjct: 246 ENPINVTDDLHCFHSNSETVIPLGSSARIDEVSASKED-----------------VGFGK 288
Query: 907 KKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSC 1086
++ HR VV ARAR+FLYHQVRLLVG LK VGTG I+ DVE+IL A+T+T+ PMAP+C
Sbjct: 289 RRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTVTATSPMAPAC 348
Query: 1087 GLYLAEVKYD 1116
GLYL EVKYD
Sbjct: 349 GLYLGEVKYD 358
>ref|XP_006858556.1| hypothetical protein AMTR_s00071p00170380 [Amborella trichopoda]
gi|548862665|gb|ERN20023.1| hypothetical protein
AMTR_s00071p00170380 [Amborella trichopoda]
Length = 367
Score = 386 bits (992), Expect = e-104
Identities = 212/390 (54%), Positives = 260/390 (66%), Gaps = 16/390 (4%)
Frame = +1
Query: 7 QTKRSLEEPNKDDHYLSKLARTQEPPMSG----------------VQRYLVAIEYDGTNF 138
QTKR+L+ P + K++++QE G VQRYLVA+EY GT F
Sbjct: 9 QTKRTLDSPAHNSK-APKISKSQEEEDEGEEEAEYCREKMTENPRVQRYLVALEYIGTRF 67
Query: 139 AGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNP 318
+GSQKQP RTV G LE+AF KF+GQPVS SSRTD GVHAL NV HVD+ERISKR P
Sbjct: 68 SGSQKQPNC-RTVMGALEEAFHKFIGQPVSIAFSSRTDAGVHALSNVCHVDVERISKRKP 126
Query: 319 GEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDP 498
E+LPPHEP VV++AVNHFLQK GGD+M++DV+ VP DFHARF AQERTYFYR+LS +P
Sbjct: 127 NELLPPHEPGVVKRAVNHFLQKDGGDMMVIDVRFVPPDFHARFMAQERTYFYRLLSSPEP 186
Query: 499 LSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMP 678
LS FEK++AWHV EDLD+ M AC +LVGHHDFSSFRAAGCQAKSP+KTLDEL V E+
Sbjct: 187 LSTFEKERAWHVPEDLDIHAMGAACGVLVGHHDFSSFRAAGCQAKSPVKTLDELHVSEVL 246
Query: 679 TWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQ 858
PNF A ER + ++ + E N DA E NG C+
Sbjct: 247 PSPNF--------PTAFER------------THNNTIEETNASKRDAADEEDLNGSRKCR 286
Query: 859 NPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKI 1038
FG+++ H+ YV+ ARARSFLYHQVRLLVG LK+VG+G ++ DV+ I
Sbjct: 287 Q------------FGQRRTHQCYVITARARSFLYHQVRLLVGVLKAVGSGVLTVADVKCI 334
Query: 1039 LKARTITSAPPMAPSCGLYLAEVKYDFRCD 1128
L+A+ +T+A PMAP+ GLYL VKY+F D
Sbjct: 335 LEAKDVTAASPMAPASGLYLGIVKYNFDSD 364
>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
gi|550312358|gb|ERP48449.1| hypothetical protein
POPTR_0022s00690g [Populus trichocarpa]
Length = 370
Score = 385 bits (988), Expect = e-104
Identities = 211/372 (56%), Positives = 256/372 (68%)
Frame = +1
Query: 1 QEQTKRSLEEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQ 180
QE+ S EE K+ + ++ +P G+QRYLVA+EY GT F GSQ+Q RTV
Sbjct: 26 QEEGDSSEEEEEKE-----AVDKSMKP---GLQRYLVAVEYIGTRFCGSQQQ-LNHRTVV 76
Query: 181 GVLEDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRK 360
GVL++AF KF+GQPV+ +SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVRK
Sbjct: 77 GVLQEAFHKFIGQPVTICLSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRK 136
Query: 361 AVNHFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTE 540
AVNHFLQK GD+M+ DV+ VP FHARF+AQERTYFYR+L G + LS FEKD+AWHV+E
Sbjct: 137 AVNHFLQKKEGDIMVTDVRSVPAHFHARFKAQERTYFYRLLIGPELLSTFEKDRAWHVSE 196
Query: 541 DLDLPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANAS 720
+LDL MQEAC++LVGHHDFSSFRA+GCQAKSP +TL+EL V E+ + P F
Sbjct: 197 ELDLVSMQEACKVLVGHHDFSSFRASGCQAKSPFRTLEELSVLEVVSTPYFP-------- 248
Query: 721 AAVERKVSISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGF 900
S TER +S + E + T G I G S GF
Sbjct: 249 ---------SITEREQNSSNG---EGPHSFHNKCKTGLPTGSISNGFMAGGSNSGTDLGF 296
Query: 901 GRKKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAP 1080
G ++ HR YV+ AR+RSFLYHQVRLLVG LKSVGTG ++ DVE+IL AR+IT+A PMAP
Sbjct: 297 GIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSITAASPMAP 356
Query: 1081 SCGLYLAEVKYD 1116
+CGLYL VKY+
Sbjct: 357 ACGLYLGHVKYE 368
>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
gi|557095305|gb|ESQ35887.1| hypothetical protein
EUTSA_v10007981mg [Eutrema salsugineum]
Length = 368
Score = 384 bits (986), Expect = e-104
Identities = 204/351 (58%), Positives = 251/351 (71%), Gaps = 3/351 (0%)
Frame = +1
Query: 76 EPPMS---GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSR 246
EP +S VQRYLVAIEY GT F+GSQ+Q T RTV GVL++AF KF+GQPV SSR
Sbjct: 49 EPELSMNPRVQRYLVAIEYIGTRFSGSQQQATD-RTVVGVLQEAFHKFIGQPVKIFCSSR 107
Query: 247 TDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVP 426
TD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+ GD+M++DV+ VP
Sbjct: 108 TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVP 167
Query: 427 MDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSS 606
++HAR++A+ERTYFYR+LSG DPLS+ EKD+AWHV E+LDL MQEACR+LVG HDFSS
Sbjct: 168 SNYHARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSS 227
Query: 607 FRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSA 786
FRAAGCQAKSPI++LDEL V E+P+ P F P +T T + + D A
Sbjct: 228 FRAAGCQAKSPIRSLDELNVTEVPSTPYF-PSITER------------TPSYLNNGDPLA 274
Query: 787 VVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQ 966
+ + T+ GD+ FG ++ HR YVV AR R+FLYHQ
Sbjct: 275 CSSQAKTETAGVSTD-----------GGDT-------FGVRRRHRCYVVTARGRAFLYHQ 316
Query: 967 VRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYDF 1119
VRLLV LK VGTG+++ DVE+ILKA+T+T+A PMAP+CGLYLA VKY+F
Sbjct: 317 VRLLVAALKCVGTGELTVSDVERILKAKTVTAAKPMAPACGLYLARVKYEF 367
>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
Length = 373
Score = 383 bits (984), Expect = e-104
Identities = 207/362 (57%), Positives = 251/362 (69%), Gaps = 1/362 (0%)
Frame = +1
Query: 34 NKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFV 213
++DD + TQ P +G+QRY +AIEY GT F+GSQKQ T RTV G LE+AF KFV
Sbjct: 33 HEDDEEEEEKEMTQNP-RNGIQRYFLAIEYIGTRFSGSQKQ-LTCRTVVGALEEAFAKFV 90
Query: 214 GQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGG 393
G PVS SSRTD GVHAL NV HVD++R SKR PGEVLPPHEP VV +AVNHFLQK
Sbjct: 91 GHPVSVSCSSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDS 150
Query: 394 DLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEAC 573
DL ++DV+ VP DFHAR++A ERTYFYR+LSG +PLS FEKD+AWHV+E+L+LP MQEAC
Sbjct: 151 DLTVIDVRCVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEAC 210
Query: 574 RILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSIST 753
R+LVG HDFSSFRAAGCQAKSPI+TLDEL V E+ +F M E +S+
Sbjct: 211 RVLVGSHDFSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDR------EGHDKVSS 264
Query: 754 TERIGDSDSSA-VVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYV 930
R S+S + + D T ++ GFG+++ HR V
Sbjct: 265 DPRSYPSNSETDIPPSSSPCIDKVTTSSED-----------------VGFGKRRRHRCLV 307
Query: 931 VVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVK 1110
V ARARSFLYHQVRLLVG LK+VGTG ++ DVE+IL A+++TSA PMAP+CGLYL EVK
Sbjct: 308 VTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKSVTSASPMAPACGLYLGEVK 367
Query: 1111 YD 1116
YD
Sbjct: 368 YD 369
>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1 [Citrus
sinensis]
Length = 383
Score = 381 bits (978), Expect = e-103
Identities = 205/346 (59%), Positives = 246/346 (71%)
Frame = +1
Query: 94 VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALM 273
+QRYL+A+EY GT F+GSQKQ RTV GVLE+AF KF+GQPVS +SSRTD GVHA
Sbjct: 57 IQRYLIAVEYIGTRFSGSQKQ-LNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHAAS 115
Query: 274 NVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRA 453
NV HVD+ERISKR PGEVLPPH+ VVR+AVNHFLQK+ GD+M+ DV+ VP DFHARFRA
Sbjct: 116 NVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSEGDIMVTDVRCVPSDFHARFRA 175
Query: 454 QERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAK 633
QERTYFYRILSG +PLSVFEKD+AWHVTE+LDL MQEAC++LVG HDFSSFRA+GCQA
Sbjct: 176 QERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFRASGCQAN 235
Query: 634 SPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAVVERNRENF 813
SPI+TLDEL V E+ + F + N + V SI + ++G
Sbjct: 236 SPIRTLDELHVSEVVSTALFP---SINQDSPV--LSSIDNSSKLG--------------- 275
Query: 814 DATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTLK 993
PNG S FG +K HR Y V+ARARSFLYHQVRL+VG LK
Sbjct: 276 ---------------MPNGGS-----NVFGIRKKHRSYEVIARARSFLYHQVRLIVGVLK 315
Query: 994 SVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYDFRCDE 1131
+VGTG+++ DVE+ILKA+T+T+A PMAP+CGL L VKYD D+
Sbjct: 316 AVGTGELTVSDVERILKAKTVTAASPMAPACGLSLGFVKYDLPEDD 361
>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
gi|332190374|gb|AEE28495.1| pseudouridine synthase family
protein [Arabidopsis thaliana]
Length = 372
Score = 380 bits (977), Expect = e-103
Identities = 201/365 (55%), Positives = 259/365 (70%)
Frame = +1
Query: 25 EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 204
+E +++ L+ L + P VQRYLVAIEY GT F+GSQ+Q RTV GVL++AF
Sbjct: 32 DEESEEQQGLADL-ESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKD-RTVVGVLQEAFH 89
Query: 205 KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 384
KF+GQPV SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+
Sbjct: 90 KFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQR 149
Query: 385 AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 564
GD+M++DV+ VP ++HAR++AQERTYFYR+LSG DPLS+ EKD+ WHV E+L+L MQ
Sbjct: 150 KDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQ 209
Query: 565 EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 744
EACR+LVG HDFSSFRAAGCQAKSP+++LDEL + E+P+ P F P +T
Sbjct: 210 EACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYF-PSITER---------- 258
Query: 745 ISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRG 924
T + + D A + + T N G + + GDS FGR++ HR
Sbjct: 259 --TLSNLNNGDPLACSNQPKSETAGVTT---NVGEVEGSTEGDS-------FGRRRRHRC 306
Query: 925 YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAE 1104
YVV AR+R FLYHQVRL+VG LK VGTG+++ DVE+IL+A+T+++A PMAP+ GLYLA
Sbjct: 307 YVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLAR 366
Query: 1105 VKYDF 1119
V+Y+F
Sbjct: 367 VRYEF 371
>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
gi|51971573|dbj|BAD44451.1| unnamed protein product
[Arabidopsis thaliana]
Length = 368
Score = 380 bits (977), Expect = e-103
Identities = 201/365 (55%), Positives = 259/365 (70%)
Frame = +1
Query: 25 EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 204
+E +++ L+ L + P VQRYLVAIEY GT F+GSQ+Q RTV GVL++AF
Sbjct: 28 DEESEEQQGLADL-ESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKD-RTVVGVLQEAFH 85
Query: 205 KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 384
KF+GQPV SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+
Sbjct: 86 KFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQR 145
Query: 385 AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 564
GD+M++DV+ VP ++HAR++AQERTYFYR+LSG DPLS+ EKD+ WHV E+L+L MQ
Sbjct: 146 KDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQ 205
Query: 565 EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 744
EACR+LVG HDFSSFRAAGCQAKSP+++LDEL + E+P+ P F P +T
Sbjct: 206 EACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYF-PSITER---------- 254
Query: 745 ISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRG 924
T + + D A + + T N G + + GDS FGR++ HR
Sbjct: 255 --TLSNLNNGDPLACSNQPKSETAGVTT---NVGEVEGSTGGDS-------FGRRRRHRC 302
Query: 925 YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAE 1104
YVV AR+R FLYHQVRL+VG LK VGTG+++ DVE+IL+A+T+++A PMAP+ GLYLA
Sbjct: 303 YVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLAR 362
Query: 1105 VKYDF 1119
V+Y+F
Sbjct: 363 VRYEF 367
>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
Length = 372
Score = 380 bits (977), Expect = e-103
Identities = 201/365 (55%), Positives = 259/365 (70%)
Frame = +1
Query: 25 EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 204
+E +++ L+ L + P VQRYLVAIEY GT F+GSQ+Q RTV GVL++AF
Sbjct: 32 DEESEEQQGLADL-ESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKD-RTVVGVLQEAFH 89
Query: 205 KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 384
KF+GQPV SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+
Sbjct: 90 KFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQR 149
Query: 385 AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 564
GD+M++DV+ VP ++HAR++AQERTYFYR+LSG DPLS+ EKD+ WHV E+L+L MQ
Sbjct: 150 KDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQ 209
Query: 565 EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 744
EACR+LVG HDFSSFRAAGCQAKSP+++LDEL + E+P+ P F P +T
Sbjct: 210 EACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYF-PSITER---------- 258
Query: 745 ISTTERIGDSDSSAVVERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRG 924
T + + D A + + T N G + + GDS FGR++ HR
Sbjct: 259 --TLSNLNNGDPLACSNQPKSETAGVTT---NVGEVEGSTGGDS-------FGRRRRHRC 306
Query: 925 YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAE 1104
YVV AR+R FLYHQVRL+VG LK VGTG+++ DVE+IL+A+T+++A PMAP+ GLYLA
Sbjct: 307 YVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLYLAR 366
Query: 1105 VKYDF 1119
V+Y+F
Sbjct: 367 VRYEF 371
>ref|XP_002331109.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 380 bits (976), Expect = e-103
Identities = 203/342 (59%), Positives = 242/342 (70%)
Frame = +1
Query: 91 GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHAL 270
G+QRYLVA+EY GT F GSQ+Q RTV GVL++AF KF+GQPV+ +SSRTD GVHAL
Sbjct: 4 GLQRYLVAVEYIGTRFCGSQQQ-LNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHAL 62
Query: 271 MNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFR 450
NV HVD+ERISKR PGEVLPPHEP VVRKAVNHFLQK GD+M+ DV+ V FHARF+
Sbjct: 63 SNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVSAHFHARFK 122
Query: 451 AQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQA 630
AQERTYFYR+L G + LS FEKD+AWHV+E+LDL MQEAC++LVGHHDFSSFRA+GCQA
Sbjct: 123 AQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQA 182
Query: 631 KSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAVVERNREN 810
KSP +TL+EL V E+ + P F S TER +S + E
Sbjct: 183 KSPFRTLEELSVLEVVSTPYFP-----------------SITEREQNSSNG---EGPHSF 222
Query: 811 FDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTL 990
+ T G I G S GFG ++ HR YV+ AR+RSFLYHQVRLLVG L
Sbjct: 223 HNKCKTGLPTGSISNGFMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVL 282
Query: 991 KSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYD 1116
KSVGTG ++ DVE+IL AR+IT+A PMAP+CGLYL VKY+
Sbjct: 283 KSVGTGDLTVSDVERILNARSITAASPMAPACGLYLGHVKYE 324
>ref|XP_006305124.1| hypothetical protein CARUB_v10009493mg [Capsella rubella]
gi|482573835|gb|EOA38022.1| hypothetical protein
CARUB_v10009493mg [Capsella rubella]
Length = 370
Score = 380 bits (975), Expect = e-102
Identities = 200/350 (57%), Positives = 254/350 (72%)
Frame = +1
Query: 70 TQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRT 249
+ P +QRYLVAIEY GT F+GSQ+Q T RTV GVL++AF KF+GQPV SSRT
Sbjct: 45 SMNPGNPRLQRYLVAIEYIGTRFSGSQQQATD-RTVVGVLQEAFHKFIGQPVKIFCSSRT 103
Query: 250 DTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPM 429
D GVHAL NV HVD+ERISKR PGEVLPPHEP VV+KAVNHFLQ+ GD+M++DV+ VP
Sbjct: 104 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQKAVNHFLQRKDGDVMVIDVRCVPS 163
Query: 430 DFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSF 609
++HAR++A+ERTYFYRILSG DPLS+ EKD+ WHV E+L+L MQEAC++LVG HDFSSF
Sbjct: 164 NYHARYKARERTYFYRILSGSDPLSILEKDRCWHVPEELNLRSMQEACKVLVGTHDFSSF 223
Query: 610 RAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAV 789
RAAGCQAKS +++LDEL V E+P+ P F P +T AS + + D A
Sbjct: 224 RAAGCQAKSAMRSLDELSVTEVPSTPYF-PSITERAS-------------NLNNGDPFAC 269
Query: 790 VERNRENFDATFTERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQV 969
+++ T N G + + +GDS FG ++ HR YVV AR+R FLYHQV
Sbjct: 270 SSQHKTETAGVGT---NVGEVEGSTDGDS-------FGARRRHRCYVVTARSRGFLYHQV 319
Query: 970 RLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYDF 1119
RLLVG LKSVGTG+++ DVE+IL+A+T++++ PMAP+ GLYLA VKY+F
Sbjct: 320 RLLVGVLKSVGTGELTVADVERILEAKTVSASKPMAPASGLYLARVKYEF 369
>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 372
Score = 380 bits (975), Expect = e-102
Identities = 206/346 (59%), Positives = 243/346 (70%), Gaps = 5/346 (1%)
Frame = +1
Query: 94 VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALM 273
+QRYL+A+EY GT FAGSQKQ RTV GVLE+AF KF+GQ VS +SSRTD GVHAL
Sbjct: 53 LQRYLIAVEYIGTKFAGSQKQLNG-RTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALS 111
Query: 274 NVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRA 453
NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQK GD+M+ DV+ VP DFHARF+A
Sbjct: 112 NVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKA 171
Query: 454 QERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAK 633
QERTYFYR LSG +PLS FEKD+AWHV EDLD+ MQEAC++LVGHHDFSSFRA+GCQAK
Sbjct: 172 QERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAK 231
Query: 634 SPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSAVVERNRENF 813
SPI+TL E+ V E+ + F S TER E+N EN
Sbjct: 232 SPIRTLAEISVSEVASTLYFP-----------------SITER----------EQNCENG 264
Query: 814 DATF-----TERDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLL 978
+ + T+ G N S G GFG ++ HR +VV ARARSFLYHQVRLL
Sbjct: 265 ENSCCKKFKTDLPMGSHSNTNVAESSFGETDLGFGIRRRHRCFVVTARARSFLYHQVRLL 324
Query: 979 VGTLKSVGTGKISCDDVEKILKARTITSAPPMAPSCGLYLAEVKYD 1116
VG LKSVG G ++ DVE+IL A+++T+A PMAP+ GLYL VKYD
Sbjct: 325 VGVLKSVGIGDLTTSDVERILSAKSVTAASPMAPARGLYLGHVKYD 370