BLASTX nr result
ID: Ephedra26_contig00019747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00019747
(446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ89531.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 2e-16
ref|XP_006657768.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 89 6e-16
sp|A2YLX7.1|LTD_ORYSI RecName: Full=Protein LHCP TRANSLOCATION D... 89 6e-16
ref|XP_006406371.1| hypothetical protein EUTSA_v10021639mg [Eutr... 87 2e-15
ref|XP_006298590.1| hypothetical protein CARUB_v10014674mg [Caps... 87 2e-15
ref|XP_002522996.1| conserved hypothetical protein [Ricinus comm... 87 2e-15
ref|XP_006370666.1| hypothetical protein POPTR_0001s44690g [Popu... 86 4e-15
ref|XP_004957877.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 86 4e-15
ref|XP_002460789.1| hypothetical protein SORBIDRAFT_02g034910 [S... 86 4e-15
ref|XP_002319824.1| predicted protein [Populus trichocarpa] 86 4e-15
ref|NP_001144531.1| hypothetical protein [Zea mays] gi|195643508... 86 4e-15
gb|ABK94006.1| unknown [Populus trichocarpa] 86 4e-15
ref|XP_006452238.1| hypothetical protein CICLE_v10009689mg [Citr... 86 5e-15
gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus pe... 86 7e-15
ref|XP_004152919.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 85 9e-15
gb|AFK46964.1| unknown [Lotus japonicus] 85 1e-14
ref|XP_003560142.1| PREDICTED: uncharacterized protein LOC100831... 85 1e-14
ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 85 1e-14
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera] 85 1e-14
ref|XP_004294361.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 84 1e-14
>dbj|BAJ89531.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/73 (61%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Frame = +3
Query: 240 GFFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXX 407
GFF FG + + S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL +SIHP
Sbjct: 61 GFFKFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQSIHPVD 120
Query: 408 XXXXXXXSEGDKP 446
SEGD P
Sbjct: 121 ILLILAASEGDLP 133
>ref|XP_006657768.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Oryza
brachyantha]
Length = 168
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/72 (61%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Frame = +3
Query: 243 FFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXX 410
FF FG + + S+ RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP
Sbjct: 55 FFKFGNKDAEGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDI 114
Query: 411 XXXXXXSEGDKP 446
SEGDKP
Sbjct: 115 LLMLAASEGDKP 126
>sp|A2YLX7.1|LTD_ORYSI RecName: Full=Protein LHCP TRANSLOCATION DEFECT; Flags: Precursor
gi|353558691|sp|A3BKF2.1|LTD_ORYSJ RecName: Full=Protein
LHCP TRANSLOCATION DEFECT; Flags: Precursor
gi|125558552|gb|EAZ04088.1| hypothetical protein
OsI_26226 [Oryza sativa Indica Group]
gi|125600465|gb|EAZ40041.1| hypothetical protein
OsJ_24479 [Oryza sativa Japonica Group]
Length = 172
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/72 (61%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Frame = +3
Query: 243 FFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXX 410
FF FG + + S+ RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP
Sbjct: 58 FFKFGNKDAEGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDI 117
Query: 411 XXXXXXSEGDKP 446
SEGDKP
Sbjct: 118 LLMLAASEGDKP 129
>ref|XP_006406371.1| hypothetical protein EUTSA_v10021639mg [Eutrema salsugineum]
gi|557107517|gb|ESQ47824.1| hypothetical protein
EUTSA_v10021639mg [Eutrema salsugineum]
Length = 174
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGDKP
Sbjct: 76 SQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQNIHPVDILLMLAASEGDKP 131
>ref|XP_006298590.1| hypothetical protein CARUB_v10014674mg [Capsella rubella]
gi|482567299|gb|EOA31488.1| hypothetical protein
CARUB_v10014674mg [Capsella rubella]
Length = 200
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGDKP
Sbjct: 102 SQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQNIHPVDILLMLAASEGDKP 157
>ref|XP_002522996.1| conserved hypothetical protein [Ricinus communis]
gi|223537808|gb|EEF39426.1| conserved hypothetical
protein [Ricinus communis]
Length = 175
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP SEGDKP
Sbjct: 78 SQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHPVDILLMLAASEGDKP 133
>ref|XP_006370666.1| hypothetical protein POPTR_0001s44690g [Populus trichocarpa]
gi|550349872|gb|ERP67235.1| hypothetical protein
POPTR_0001s44690g [Populus trichocarpa]
Length = 171
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGDKP
Sbjct: 74 SQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKP 129
>ref|XP_004957877.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Setaria italica]
Length = 186
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Frame = +3
Query: 243 FFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXX 410
+F FG + + S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP
Sbjct: 73 WFRFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDI 132
Query: 411 XXXXXXSEGDKP 446
SEGD+P
Sbjct: 133 LLMLAASEGDRP 144
>ref|XP_002460789.1| hypothetical protein SORBIDRAFT_02g034910 [Sorghum bicolor]
gi|241924166|gb|EER97310.1| hypothetical protein
SORBIDRAFT_02g034910 [Sorghum bicolor]
Length = 184
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Frame = +3
Query: 243 FFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXX 410
+F FG + + S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP
Sbjct: 71 WFKFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQKIHPVDI 130
Query: 411 XXXXXXSEGDKP 446
SEGD+P
Sbjct: 131 LLMLAASEGDRP 142
>ref|XP_002319824.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGDKP
Sbjct: 74 SQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKP 129
>ref|NP_001144531.1| hypothetical protein [Zea mays] gi|195643508|gb|ACG41222.1|
hypothetical protein [Zea mays]
gi|223946937|gb|ACN27552.1| unknown [Zea mays]
gi|414886920|tpg|DAA62934.1| TPA: hypothetical protein
ZEAMMB73_311368 [Zea mays]
Length = 186
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Frame = +3
Query: 243 FFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXX 410
+F FG + + S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP
Sbjct: 73 WFKFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDI 132
Query: 411 XXXXXXSEGDKP 446
SEGD+P
Sbjct: 133 LLMLAASEGDRP 144
>gb|ABK94006.1| unknown [Populus trichocarpa]
Length = 171
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGDKP
Sbjct: 74 SQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKP 129
>ref|XP_006452238.1| hypothetical protein CICLE_v10009689mg [Citrus clementina]
gi|568882260|ref|XP_006493957.1| PREDICTED: protein LHCP
TRANSLOCATION DEFECT-like [Citrus sinensis]
gi|557555464|gb|ESR65478.1| hypothetical protein
CICLE_v10009689mg [Citrus clementina]
Length = 173
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+ RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGDKP
Sbjct: 75 SQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKP 130
>gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus persica]
Length = 173
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDFDR DVE+YFNYMGMLAVEGTYDKM ALL ++IHP SEGDKP
Sbjct: 75 SQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMNALLSQNIHPVDILLLMAASEGDKP 130
>ref|XP_004152919.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cucumis sativus]
gi|449513487|ref|XP_004164338.1| PREDICTED: protein LHCP
TRANSLOCATION DEFECT-like [Cucumis sativus]
Length = 168
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDF+R DVE+YFNYMGMLAVEGTYDKMEALL + IHP SEGDKP
Sbjct: 70 SQSRDDFNRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHPVDILLMLAASEGDKP 125
>gb|AFK46964.1| unknown [Lotus japonicus]
Length = 175
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + IHP SEGD P
Sbjct: 78 SQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIHPVDILLLLAASEGDMP 133
>ref|XP_003560142.1| PREDICTED: uncharacterized protein LOC100831388 [Brachypodium
distachyon]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14
Identities = 42/72 (58%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Frame = +3
Query: 243 FFNFGRQPPKSV----SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXX 410
FF FG + + S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL + HP
Sbjct: 59 FFKFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQGTHPVDI 118
Query: 411 XXXXXXSEGDKP 446
SEGD P
Sbjct: 119 LLLLAASEGDVP 130
>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
gi|297735982|emb|CBI23956.3| unnamed protein product
[Vitis vinifera]
Length = 172
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGD+P
Sbjct: 74 SQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMMAASEGDQP 129
>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
Length = 172
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S++RDDFDR DVE+YFNYMGMLAVEGTYDKMEALL ++IHP SEGD+P
Sbjct: 74 SQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMMAASEGDQP 129
>ref|XP_004294361.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Fragaria vesca
subsp. vesca]
Length = 175
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +3
Query: 279 SKSRDDFDRTDVEEYFNYMGMLAVEGTYDKMEALLKESIHPXXXXXXXXXSEGDKP 446
S+SRDDFD+ DVE+YFNYMGMLAVEGTYDKM ALL ++IHP SEGDKP
Sbjct: 77 SQSRDDFDKDDVEQYFNYMGMLAVEGTYDKMNALLSQNIHPVDILLLMAASEGDKP 132