BLASTX nr result

ID: Ephedra26_contig00019698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019698
         (1490 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16449.1| unknown [Picea sitchensis]                             149   3e-33

>gb|ABR16449.1| unknown [Picea sitchensis]
          Length = 490

 Score =  149 bits (376), Expect = 3e-33
 Identities = 137/493 (27%), Positives = 209/493 (42%), Gaps = 50/493 (10%)
 Frame = +1

Query: 79   MAMDARS--LLQKLRGDLLKNAGLXXXXXXXXXXXXXXXXVPTLEEIVRNAIKGPFRCEY 252
            MA++  S  LLQK+R  LL+ AG                 +PTLEE+V NA  GPFRC  
Sbjct: 1    MAVEGASTLLLQKIRSHLLEVAG--------SNPSTSTNPLPTLEEVVANAGSGPFRCHK 52

Query: 253  CRSGLLLGPKSRLCATCGALRDGDASSYKVXXXXXXXXXXXXXXXDSQAT---TSTDKKY 423
            CR+ LLLGP SR+CA CG  RD  ASS+++                 Q +   T     Y
Sbjct: 53   CRASLLLGPNSRICAACGTPRDEAASSFRLSFASTLAYQLLTASFQPQGSDVPTGKPIPY 112

Query: 424  AEPDS-RTNSYDQNE-VLAEDFSKLELRWCEEDLRAPDLERKQ------KPVNPLKIDLE 579
            AE  S  T   +Q + ++A D S LEL+W E+ LR  +  + +       P   L +DLE
Sbjct: 113  AEATSVWTEKTEQKDGLIACDISSLELKWPEDKLRGSNQHKSKAQTTNANPSYRLGVDLE 172

Query: 580  ALFNKSDPQKASINAKESSAARSQETVIKYDVPGDNLSSFIQNDNAIDLFSGNSSINKTH 759
              F KS  QK S   KE      Q   +      + +    +ND+ IDLF+   S  K  
Sbjct: 173  DFFGKSKSQKGSDIHKEYIITTGQVQDVGQHASAELVPPASENDSHIDLFATQPSRQKIQ 232

Query: 760  NNIAEASFTASWKAEFENAEDSFHDF-----NNAALQSVDEKQQLA-KRESSLSAIDSHE 921
             ++ +      W+A+F++A+   +       + +A+ S D    L  + + S+ AI S  
Sbjct: 233  TDVGDDDSFLPWEADFQSAKPELNVLGLKSPDTSAVPSADFPFHLTEENKGSVLAIFSQS 292

Query: 922  SSGNPNKAGD---------FFTNDLDPDDFWSGMALKEDKSERPAVNSNKT-LEPDWPEA 1071
            +      +GD            N    DD WS +  KE       +    T  +  WPEA
Sbjct: 293  TVNGKGMSGDQKSGAKSTMHVQNSWLQDDPWSSIMTKEAYGGSSQIPEESTDFQAGWPEA 352

Query: 1072 Y-------NWXXXXXXXXXQKKETNNGDAMCFGMNGTDKLDIFQVNHFAEEMKDKGKTFE 1230
            Y        W         +    N  + +       +   +FQ N  ++ ++    T  
Sbjct: 353  YQDSFSVSTWQQGDNFQNNKLTAGNVKNHIAVENEMVEFDTLFQSNPTSQILRVDEATSA 412

Query: 1231 KVNSPGTNIYARIEEEGVSPSPH--------------HDGYNASSDSERIVESLLSNAKD 1368
                   +++  +E++ V+                      +++ DS++ V+SLLS   D
Sbjct: 413  NTTLTEFDLFNGVEDKKVNVQAKALSASLNMGNSTIAMPQVSSNDDSKQRVDSLLSEMHD 472

Query: 1369 LSFMLSDNLVIPD 1407
            LSFML+D+LVIPD
Sbjct: 473  LSFMLADHLVIPD 485


Top