BLASTX nr result

ID: Ephedra26_contig00019629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019629
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006290201.1| hypothetical protein CARUB_v10003887mg [Caps...    56   6e-06
ref|NP_197678.1| late embryogenesis abundant hydroxyproline-rich...    56   6e-06
gb|ABK21301.1| unknown [Picea sitchensis]                              55   7e-06
ref|XP_002874099.1| hypothetical protein ARALYDRAFT_910289 [Arab...    55   9e-06

>ref|XP_006290201.1| hypothetical protein CARUB_v10003887mg [Capsella rubella]
           gi|482558907|gb|EOA23099.1| hypothetical protein
           CARUB_v10003887mg [Capsella rubella]
          Length = 209

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -1

Query: 423 HAKDLRSEQGSGSMDLHVIVEARTRFKVGSWKSEHYLIKVKCRHVSL 283
           +AK LR++  SG +D  V V+AR RFKVG WK+ H+  KVKC HV++
Sbjct: 146 NAKYLRAQTLSGKIDFEVFVKARVRFKVGVWKTAHHTAKVKCSHVTV 192


>ref|NP_197678.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana] gi|10177234|dbj|BAB10608.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332005707|gb|AED93090.1| late embryogenesis abundant
           hydroxyproline-rich glycoprotein [Arabidopsis thaliana]
          Length = 207

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = -1

Query: 423 HAKDLRSEQGSGSMDLHVIVEARTRFKVGSWKSEHYLIKVKCRHVSLPSS 274
           + KDLRS+   G +   V V+AR RFKVG WKS H   K+KC HV++  S
Sbjct: 144 NGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLS 193


>gb|ABK21301.1| unknown [Picea sitchensis]
          Length = 205

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
 Frame = -1

Query: 420 AKDLRSEQGSGSMDLHVIVEARTRFKVGSWKSEHYLIKVKCRHVSLPSSGE----IFPKK 253
           ++DL+ E+ SG +DL   + AR RFKVG+WKS HY + VKC HV L  + +     F + 
Sbjct: 140 SRDLKLERSSGKVDLVFRLYARIRFKVGNWKSGHYTLSVKCGHVVLDVADKGHTGSFQRM 199

Query: 252 KC 247
           KC
Sbjct: 200 KC 201


>ref|XP_002874099.1| hypothetical protein ARALYDRAFT_910289 [Arabidopsis lyrata subsp.
           lyrata] gi|297319936|gb|EFH50358.1| hypothetical protein
           ARALYDRAFT_910289 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = -1

Query: 423 HAKDLRSEQGSGSMDLHVIVEARTRFKVGSWKSEHYLIKVKCRHVSLPSS 274
           + KDLRS+   G ++  V V+AR RFKVG WKS H   K++C HV++  S
Sbjct: 145 NGKDLRSQTSLGKIEFEVFVKARVRFKVGIWKSSHRTAKIECSHVTVSLS 194


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