BLASTX nr result

ID: Ephedra26_contig00019520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019520
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17741.1| unknown [Picea sitchensis]                              77   2e-12
ref|XP_006838364.1| hypothetical protein AMTR_s00002p00020080 [A...    65   1e-08
ref|XP_006472478.1| PREDICTED: uncharacterized protein LOC102623...    59   5e-07
ref|XP_006433836.1| hypothetical protein CICLE_v10002397mg [Citr...    57   2e-06
ref|XP_006433835.1| hypothetical protein CICLE_v10002397mg [Citr...    57   2e-06

>gb|ABR17741.1| unknown [Picea sitchensis]
          Length = 241

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
 Frame = -3

Query: 333 GTLLWAKLDLANLNLPTWWPVQVVDERVVSEDNIYNEKMDGGILVRYYGSYIYVWMDPVL 154
           G LLWA++D +      WWPVQ+VDE+ +S++ I+N+++ GG+L R+YGS IY W+DP  
Sbjct: 34  GRLLWARMDQS-----PWWPVQIVDEKTISQNCIFNDRIKGGVLARFYGSCIYAWVDPFA 88

Query: 153 SLXXXXXXXXXXXXXXXXXFRALMQE-----DFSGNSMQSNPKSDNQATSSKKRKT 1
            +                  +AL +E         +S++ N KS    TSS+  K+
Sbjct: 89  HVSQFQGSFKEKGSNLRAFQKALEEEMLLRSKIVKSSVEPNGKSKYSETSSQHNKS 144


>ref|XP_006838364.1| hypothetical protein AMTR_s00002p00020080 [Amborella trichopoda]
           gi|548840870|gb|ERN00933.1| hypothetical protein
           AMTR_s00002p00020080 [Amborella trichopoda]
          Length = 185

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = -3

Query: 336 LGTLLWAKLDLANLNLPTWWPVQVVDERVVSEDNIYNEKMDGGILVRYYGSYIYVWMDPV 157
           LG L+W K+         WWP QVVD+++V + N  N+ ++GG LVR YGSY ++W+DP+
Sbjct: 22  LGVLMWVKIHDG-----LWWPAQVVDDKMVCDSNKLNDIIEGGFLVRLYGSYDHLWVDPM 76

Query: 156 L 154
           +
Sbjct: 77  I 77


>ref|XP_006472478.1| PREDICTED: uncharacterized protein LOC102623137 isoform X2 [Citrus
           sinensis]
          Length = 224

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/59 (49%), Positives = 39/59 (66%)
 Frame = -3

Query: 333 GTLLWAKLDLANLNLPTWWPVQVVDERVVSEDNIYNEKMDGGILVRYYGSYIYVWMDPV 157
           G + WAKL   N+    WWP  VVDE  VSE N  +++  GG+LVR YGSY Y+++DP+
Sbjct: 33  GDVTWAKLR-GNI----WWPAVVVDENTVSECNKPSKRASGGVLVRLYGSYEYLYVDPI 86


>ref|XP_006433836.1| hypothetical protein CICLE_v10002397mg [Citrus clementina]
           gi|557535958|gb|ESR47076.1| hypothetical protein
           CICLE_v10002397mg [Citrus clementina]
          Length = 224

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = -3

Query: 333 GTLLWAKLDLANLNLPTWWPVQVVDERVVSEDNIYNEKMDGGILVRYYGSYIYVWMDPV 157
           G + WAKL         WWP  VVDE  VSE N  +++  GG LVR YGSY Y+++DP+
Sbjct: 33  GDVTWAKL-----RGNKWWPAVVVDENTVSECNKPSKRASGGFLVRLYGSYEYLYVDPI 86


>ref|XP_006433835.1| hypothetical protein CICLE_v10002397mg [Citrus clementina]
           gi|557535957|gb|ESR47075.1| hypothetical protein
           CICLE_v10002397mg [Citrus clementina]
          Length = 217

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = -3

Query: 333 GTLLWAKLDLANLNLPTWWPVQVVDERVVSEDNIYNEKMDGGILVRYYGSYIYVWMDPV 157
           G + WAKL         WWP  VVDE  VSE N  +++  GG LVR YGSY Y+++DP+
Sbjct: 33  GDVTWAKL-----RGNKWWPAVVVDENTVSECNKPSKRASGGFLVRLYGSYEYLYVDPI 86


Top