BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019426
         (1371 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002142439.1| RNA recognition motif. family protein [Crypt...    59   6e-06
ref|YP_803612.1| subtilisin-like serine protease [Pediococcus pe...    58   8e-06

>ref|XP_002142439.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
            gi|209558045|gb|EEA08090.1| RNA recognition motif. family
            protein [Cryptosporidium muris RN66]
          Length = 1078

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 14/406 (3%)
 Frame = +1

Query: 1    SDDKDISVMNKQSDEFPVNNIQTTVTSIEPAFHDKNIDNSLPSASNDKLPSTHIVAESSS 180
            S D D     K+      N  ++  +S   +  + N D+   S S  K P+T +   S  
Sbjct: 372  SSDSDSDSKIKKPTTIKSNLKKSMSSSDSESSSNTNSDSDSDSNSRIKKPTT-VKLNSKK 430

Query: 181  NTSNFDSIRSEENTKNFDKSKDHSLGEQGREPNAVSGITTRVTGEVSLPSSVPDENDAGF 360
             T+   S   +  + +  +S  ++  +   +P++ S I    T + S   S+   +    
Sbjct: 431  PTTTIKSNLKKYMSSSDSESSSNTSSDSDSDPDSDSKIKKPTTIKSSSKKSMSSSDSESS 490

Query: 361  PQSSLAATSLEDIKIDLPT----SRKPVLHPNGETCISTE---ENDSREIQPS--EDHVV 513
              +S  + S   IK    T    S+K +   + E+  +T    ++DSR  +P+  + +  
Sbjct: 491  SNTSSDSDSNSRIKKPTTTIKSNSKKSMSSSDSESSSNTSSDSDSDSRIKKPTTIKSNSK 550

Query: 514  VAKFSASSEEKATDVHEGHINSKVHSSNITRSNIESDIKLADKEISENSKKELDETVDLK 693
             +  S+ SE  +    +   +SK+      +SN++  +  +D E S N+  + D    +K
Sbjct: 551  KSMSSSDSESSSNTSSDSDSDSKIKKPTTIKSNLKKSMSSSDSESSSNTSSDSDSDSRIK 610

Query: 694  PQTDQVGGGQRIIISKNEAVVTPIASGLECANDVTXXXXXXXXXXPLHAENIKKGFSFTK 873
              T      ++ + S +    +  +S  +  + +                N+KK  S + 
Sbjct: 611  KPTTIKSNSKKSMSSSDSESSSNTSSDSDSDSKIKKPTTI--------KSNLKKSMSSSD 662

Query: 874  SGTKENTIRDNSI-----KTASFRRHLNASFSGGFSEIPPVGDRRNHMNRRSADNIGSNV 1038
            S +  NT  D+       K  + + +L  S S   SE        +  N  S  +  SN 
Sbjct: 663  SESSSNTSSDSDSDSRIKKPTTIKSNLKKSMSSSDSE--------SSSNTSSDSDSYSNS 714

Query: 1039 REVKKKTTEAEQSQEKKTLSKEVINSASKTIAPTVEAGSILLKPDT 1176
            R +KK  T  + + +K   S +  +S+S       ++ S + KP T
Sbjct: 715  R-IKKPITTVKSNLKKSMSSSDSESSSSTNSDSDSDSNSRIKKPTT 759


>ref|YP_803612.1| subtilisin-like serine protease [Pediococcus pentosaceus ATCC 25745]
            gi|499992083|ref|WP_011672801.1| subtilisin-like serine
            protease [Pediococcus pentosaceus]
            gi|116102027|gb|ABJ67170.1| Subtilisin-like serine
            protease [Pediococcus pentosaceus ATCC 25745]
          Length = 2334

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 79/405 (19%), Positives = 152/405 (37%), Gaps = 31/405 (7%)
 Frame = +1

Query: 1    SDDKDISVMNKQSDEFPVNNIQTTVTSIEPAFHDKNIDNSLP--SASNDKLPSTHIVAES 174
            S    +S  N  SD    +  ++T TSI  +  D N  ++    S S     S    A  
Sbjct: 806  STSDSVSTSNSNSDSKSKSESRSTSTSISDSISDSNSKSTSESRSTSTSSSDSKSDSASK 865

Query: 175  SSNTSNFDSIRSEENTKNFDKSKDHSLGEQGREPNAVSGITTRVTGEVSLPSSVPDENDA 354
            S + S  DSI S   +++   S   S  +   +  + S  T+      S+  S+ D N  
Sbjct: 866  SDSISKSDSITSNSISESISTSNSDSSSKSDSKSTSESRSTS-----TSVSDSISDSNSK 920

Query: 355  GFPQSSLAATSLEDIKIDLPTSRKPVLHPNGETCISTEENDSREIQPSEDHVVVAKFSAS 534
               +S   +TS+ D   D  ++     H   ++ +ST  +DS     SE        S S
Sbjct: 921  STSESRSTSTSVSDSTSDSTSTS----HSTSDS-VSTSNSDSNSKSTSESRSTSTSISDS 975

Query: 535  SEEKATDVHEGHINSKVHSSNITRSNIESDIKLADKEISEN-------SKKELDETVDLK 693
              + A+       +  + S++I+ S   S    + K +S++       S    D      
Sbjct: 976  KSDSASKSDSVSKSDSITSNSISESISTSKSDSSSKSMSDSRSASTSVSDSTSDSASTSH 1035

Query: 694  PQTDQVGGGQRIIISKNEAVVT------------PIASGLECANDVTXXXXXXXXXXPLH 837
             ++D V        SK+++V T             I+  +  +   +             
Sbjct: 1036 SKSDSVSTSNSDSSSKSDSVSTSDSRSTSTSVSDSISKSMSDSRSTSTSVSDSKSDSESK 1095

Query: 838  AENIKKGFSFTKSGTKE-------NTIRDNSIKTASFRRHLNASFSGGFSEIPPVGDRRN 996
            +++I K  S T +   E       ++I D++ K+ S  R  + S S   S+     D  +
Sbjct: 1096 SDSISKSDSITSNSISESISTSNSDSISDSNSKSTSDSRSTSTSISDSKSDSASKSDSVS 1155

Query: 997  HMNRRSADNIGSNVREVKKKT---TEAEQSQEKKTLSKEVINSAS 1122
              +  ++D+I  ++      +   + ++ + + ++ S  V +S S
Sbjct: 1156 KSDSITSDSISESISTSNSDSISDSNSKSTSDSRSTSTSVSDSKS 1200