BLASTX nr result
ID: Ephedra26_contig00019303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00019303
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica] 78 2e-12
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 76 5e-12
emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera] 76 6e-12
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera] 76 6e-12
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 75 8e-12
emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera] 75 8e-12
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera] 75 8e-12
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 75 1e-11
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 75 1e-11
ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854... 75 1e-11
emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera] 75 1e-11
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 75 1e-11
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi... 75 1e-11
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera] 74 2e-11
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 74 2e-11
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 73 3e-11
gb|AAT38797.2| Polyprotein, putative [Solanum demissum] 74 3e-11
dbj|BAA22288.1| polyprotein [Oryza australiensis] 72 7e-11
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 72 7e-11
emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera] 72 7e-11
>gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]
Length = 1249
Score = 77.8 bits (190), Expect = 2e-12
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +1
Query: 286 TINVNLAYMKKSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRM 465
T + + + K +++PF + K+ K E++HSD+ GP P + F YF+TF+DD SR
Sbjct: 467 TQDCEVCHFSKQTRLPFDVSSTKSCKPFEIVHSDVWGPAPLVSFDGFRYFVTFVDDFSRC 526
Query: 466 NWIYFFEGKIEAFDKFKEFHKLVHNE 543
W+Y + K E + F+EFH LV N+
Sbjct: 527 TWLYLLKSKDEVINVFQEFHSLVTNQ 552
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 76.3 bits (186), Expect = 5e-12
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
K +K PF + + ++ L L+H+D+CGP+ FGYF TF DD SR ++Y K
Sbjct: 455 KMTKAPFTGQSERASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKS 514
Query: 496 EAFDKFKEFHKLVHN 540
E+F+KFKEFH V N
Sbjct: 515 ESFEKFKEFHNEVQN 529
>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
Length = 1355
Score = 75.9 bits (185), Expect = 6e-12
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 223 IWITLKGH---IIL*KIAQKNFK*TINVNLAYMKKSSKIPFKHHTNKNNKRLELIHSDIC 393
+W GH + KI K T ++ + KS+++PF +K+++ EL+HSD+
Sbjct: 499 LWHQRLGHPSESVFNKIHPSLPKGTDGCDICHYSKSTRLPFNLSLSKSSEMFELVHSDVW 558
Query: 394 GPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKIEAFDKFKEFHKLV 534
GP + F YF+TFIDD S++ W+Y + K E F+ FK+FH+LV
Sbjct: 559 GPFS-LSIDGFKYFVTFIDDFSKVTWVYLLKSKSEVFECFKDFHRLV 604
>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
KS +PF H ++ + +LIHSD+ GP P H+ F Y++TFIDD SR W+YF K
Sbjct: 512 KSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKS 571
Query: 496 EAFDKFKEFHKLVHNE 543
E F F EF V N+
Sbjct: 572 EVFXTFTEFLAYVDNQ 587
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 75.5 bits (184), Expect = 8e-12
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 310 MKKSSKIPFKHHTNKN-NKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFE 486
M K S+ F + N NK LELIHSD+CGP+ YFLTFIDD SRM W+YF +
Sbjct: 496 MGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLK 555
Query: 487 GKIEAFDKFKEFHKLVHNEKK 549
K E KFK F V N+ +
Sbjct: 556 NKSEVITKFKIFKPYVENQSE 576
>emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera]
Length = 1303
Score = 75.5 bits (184), Expect = 8e-12
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
KS +PF H ++ + +LIHSD+ GP P H+ F Y++TFIDD SR W+YF K
Sbjct: 655 KSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKS 714
Query: 496 EAFDKFKEFHKLVHNE 543
E F F EF V N+
Sbjct: 715 EVFRTFTEFLAYVDNQ 730
>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 75.5 bits (184), Expect = 8e-12
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
KS +PF H ++ + +LIHSD+ GP P H+ F Y++TFIDD SR W+YF K
Sbjct: 677 KSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKS 736
Query: 496 EAFDKFKEFHKLVHNE 543
E F F EF V N+
Sbjct: 737 EVFRTFTEFLAYVDNQ 752
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
K +K PF + + ++ L L+H+D+CGP+ FGYF+ F DD SR ++Y K
Sbjct: 28 KITKAPFTGQSERASELLRLVHTDVCGPMSSTARGGFGYFIIFTDDFSRYGYVYLMRHKS 87
Query: 496 EAFDKFKEFHKLVHN--EKKVK 555
E+F+KFKEFH V N +K +K
Sbjct: 88 ESFEKFKEFHNEVQNHLDKTIK 109
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
K +K PF + + ++ L L+H+D+CGP+ FGYF+ F DD SR ++Y K
Sbjct: 28 KITKAPFTGQSERASELLRLVHTDVCGPMSSTARGGFGYFIIFTDDFSRYGYVYLMRHKS 87
Query: 496 EAFDKFKEFHKLVHN--EKKVK 555
E+F+KFKEFH V N +K +K
Sbjct: 88 ESFEKFKEFHNEVQNHLDKTIK 109
>ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
Length = 1689
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
KS +PF H ++ + L+LIHSD+ GP P ++ F Y++TFIDD SR W+YF K
Sbjct: 402 KSKTLPFPLHASRASHCLDLIHSDVWGPSPISSYEKFKYYVTFIDDHSRFTWVYFLRSKS 461
Query: 496 EAFDKFKEFHKLVHNE 543
E F F EF V N+
Sbjct: 462 EVFRTFTEFLAYVDNQ 477
>emb|CAN67970.1| hypothetical protein VITISV_025093 [Vitis vinifera]
Length = 1023
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
KS +PF H ++ + +LIHSD+ GP P H+ F Y++TFIDD SR W+YF K
Sbjct: 431 KSKTLPFPLHASRASHCFDLIHSDVWGPSPISSHEKFKYYVTFIDDHSRFTWVYFLRSKS 490
Query: 496 EAFDKFKEFHKLVHNE 543
E F F EF V N+
Sbjct: 491 EVFRTFIEFLAYVDNQ 506
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
K +K PF + + ++ L L+H+D+CGP+ FGYF+TF DD SR ++Y K
Sbjct: 474 KMTKAPFTGQSERASELLALVHTDVCGPMSSTARSGFGYFITFTDDFSRYGYVYLMRHKS 533
Query: 496 EAFDKFKEFHKLVHN 540
E+F+KFKEF V N
Sbjct: 534 ESFEKFKEFQNEVQN 548
>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 822
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 310 MKKSSKIPF-KHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFE 486
+ K S+ PF K + +LELIHSD+CGP+ + Y LTFIDD +RM W+YF +
Sbjct: 199 LSKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLK 258
Query: 487 GKIEAFDKFKEFHKLVHN 540
K E F FK+F LV N
Sbjct: 259 AKSEVFQTFKKFKNLVEN 276
>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
Length = 808
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = +1
Query: 352 KNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKIEAFDKFKEFHKL 531
K NK LEL+HSDICGP+ + YF+TFIDD SR W+YF + K EAF FK F L
Sbjct: 35 KANKVLELVHSDICGPINPTSNGGKRYFITFIDDYSRKTWVYFLQEKSEAFSTFKSFKML 94
Query: 532 VHNE 543
V E
Sbjct: 95 VEKE 98
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
K +K PF + + ++ L L+H+D+CGP+ FGYF+TF DD SR ++Y K
Sbjct: 955 KMTKAPFTGQSERTSELLVLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKS 1014
Query: 496 EAFDKFKEFHKLVHN 540
E+F+KFKEF V N
Sbjct: 1015 ESFEKFKEFQNEVQN 1029
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101216349 [Cucumis sativus]
Length = 1830
Score = 72.8 bits (177), Expect(2) = 3e-11
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Frame = +1
Query: 337 KHHTN--------KNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGK 492
KHH N + +K LEL+H+D+CGP+ H YFLTFIDD SR WIY + K
Sbjct: 480 KHHRNSFPTGGSWRASKPLELVHTDLCGPMRTTTHGGNRYFLTFIDDYSRKTWIYLLKEK 539
Query: 493 IEAFDKFKEFHKLVHNEKKVK 555
F+ FK F +V NE +K
Sbjct: 540 SATFECFKTFKAMVENESNLK 560
Score = 21.2 bits (43), Expect(2) = 3e-11
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 294 CEPCIYEKIF*NSFQT 341
CE C++ K NSF T
Sbjct: 473 CEACVFGKHHRNSFPT 488
>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
Length = 1793
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +1
Query: 316 KSSKIPFK-HHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGK 492
K +K+PF+ + + N++L+LIH+D+CGP+ YFL FIDD +RM W+YF K
Sbjct: 610 KQTKLPFQANQVWRANQKLQLIHTDVCGPIKTDSLSGNKYFLLFIDDYTRMCWVYFIRLK 669
Query: 493 IEAFDKFKEFHKLVHNE 543
E FD FK+F LV N+
Sbjct: 670 SEVFDVFKQFKALVENQ 686
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 72.4 bits (176), Expect = 7e-11
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
K +K PF H+ + + L L+H+D+CGP+ + YF+TF DD SR +IY K
Sbjct: 479 KMTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKS 538
Query: 496 EAFDKFKEFHKLVHN 540
E+F+KFKEF V N
Sbjct: 539 ESFEKFKEFQNEVQN 553
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 72.4 bits (176), Expect = 7e-11
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 316 KSSKIPFKHHT-NKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGK 492
K +++ FK H +K ++ LEL+HSD+CGPL YF+TFIDD SR W+Y + K
Sbjct: 456 KQTRVSFKKHPPSKKSELLELVHSDVCGPLKVKSFTGTIYFVTFIDDCSRKLWVYALKTK 515
Query: 493 IEAFDKFKEFHKLVHNE--KKVK 555
+ KFKEFH LV + KK+K
Sbjct: 516 DQVLAKFKEFHVLVERQSGKKLK 538
>emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera]
Length = 1652
Score = 72.4 bits (176), Expect = 7e-11
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +1
Query: 316 KSSKIPFKHHTNKNNKRLELIHSDICGPLPHIPHKDFGYFLTFIDDKSRMNWIYFFEGKI 495
KS + F H ++ + +LIHSD+ GP P H+ F Y++TFIDD SR W+YF K
Sbjct: 596 KSKTLLFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRSKF 655
Query: 496 EAFDKFKEFHKLVHNE 543
E F F EF V N+
Sbjct: 656 EVFRTFTEFLAYVDNQ 671