BLASTX nr result

ID: Ephedra26_contig00019035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019035
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23801.1| unknown [Picea sitchensis]                              92   5e-17
ref|NP_563854.1| DNA polymerase delta subunit 4  [Arabidopsis th...    92   7e-17
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...    92   7e-17
gb|AAM65969.1| unknown [Arabidopsis thaliana]                          92   7e-17
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...    92   9e-17
ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-li...    91   2e-16
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr...    90   3e-16
ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li...    89   6e-16
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606...    89   8e-16
ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [A...    88   1e-15
ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608...    87   2e-15
ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citr...    87   2e-15
ref|XP_002972420.1| hypothetical protein SELMODRAFT_441751 [Sela...    87   2e-15
ref|XP_002984250.1| hypothetical protein SELMODRAFT_445786 [Sela...    87   2e-15
ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Caps...    87   3e-15
gb|EPS67252.1| hypothetical protein M569_07529, partial [Genlise...    86   4e-15
gb|ESW31010.1| hypothetical protein PHAVU_002G201200g [Phaseolus...    86   7e-15
gb|EOY10253.1| Polymerase delta 4, putative [Theobroma cacao]          86   7e-15
gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao]                    84   1e-14
gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus pe...    84   3e-14

>gb|ABK23801.1| unknown [Picea sitchensis]
          Length = 135

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD D  EE+L+QFDMNMKYGPCIGV R++RW RA+K GL+PP +VK  LE  G   DC+W
Sbjct: 72  DDIDNMEEVLRQFDMNMKYGPCIGVPRLERWERASKLGLDPPQQVKVFLERAGGISDCLW 131

Query: 118 QDRV 107
           + RV
Sbjct: 132 EGRV 135


>ref|NP_563854.1| DNA polymerase delta subunit 4  [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 35/64 (54%), Positives = 55/64 (85%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           +D D+ EE+L+QFDMN+ YGPC+G++R+DRW RA + G+NPP++++ +L++G V+QDC+W
Sbjct: 61  EDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCLW 120

Query: 118 QDRV 107
           Q RV
Sbjct: 121 QGRV 124


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 35/64 (54%), Positives = 55/64 (85%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           +D D+ EE+L+QFDMN+ YGPC+G++R+DRW RA + G+NPP++++ +L++G V+QDC+W
Sbjct: 59  EDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLW 118

Query: 118 QDRV 107
           Q RV
Sbjct: 119 QGRV 122


>gb|AAM65969.1| unknown [Arabidopsis thaliana]
          Length = 124

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 35/64 (54%), Positives = 55/64 (85%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           +D D+ EE+L+QFDMN+ YGPC+G++R+DRW RA + G+NPP++++ +L++G V+QDC+W
Sbjct: 61  EDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKTGKVQQDCLW 120

Query: 118 QDRV 107
           Q RV
Sbjct: 121 QGRV 124


>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 35/64 (54%), Positives = 50/64 (78%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD D+ EE+L+QFDMNM YGPC+G++R+ RW RA + GLNPP +++D+L+ G V  +C+W
Sbjct: 63  DDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLLKGGKVNSECLW 122

Query: 118 QDRV 107
             RV
Sbjct: 123 DGRV 126


>ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum tuberosum]
          Length = 133

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/64 (59%), Positives = 47/64 (73%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD DE EE+L+QFDMNM YGPC+G+SR+DRW RA   GLNPP  V+ IL S  V+ +C+W
Sbjct: 70  DDYDENEELLRQFDMNMTYGPCLGLSRLDRWERAKSFGLNPPRDVEPILRSSKVRNECLW 129

Query: 118 QDRV 107
              V
Sbjct: 130 DGMV 133


>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
           gi|557095301|gb|ESQ35883.1| hypothetical protein
           EUTSA_v10009118mg [Eutrema salsugineum]
          Length = 124

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 36/64 (56%), Positives = 53/64 (82%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           D  D+ EE+L+QFDMNM YGPC+G++R+DRW RA + G+NPPS+++ +L++  V+QDC+W
Sbjct: 61  DAYDKEEEMLRQFDMNMAYGPCLGMTRLDRWERALRLGMNPPSEIERLLKTEKVQQDCLW 120

Query: 118 QDRV 107
           Q RV
Sbjct: 121 QGRV 124


>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
           lycopersicum]
          Length = 120

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 35/64 (54%), Positives = 50/64 (78%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           D+ D+ EE+L+QFDMNM YGPC+G++R+DRW RA K G+NPP+ V+ +L S  V+ +C+W
Sbjct: 57  DNYDQNEEVLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPADVERLLRSNKVRNECLW 116

Query: 118 QDRV 107
             RV
Sbjct: 117 DGRV 120


>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
          Length = 120

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 35/64 (54%), Positives = 49/64 (76%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           D  D+ EE+L+QFDMNM YGPC+G++R+DRW RA K G+NPP+ V+ +L S  V+ +C+W
Sbjct: 57  DSYDQNEEVLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPTDVERLLRSNKVRNECLW 116

Query: 118 QDRV 107
             RV
Sbjct: 117 DGRV 120


>ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [Amborella trichopoda]
           gi|548831999|gb|ERM94801.1| hypothetical protein
           AMTR_s00011p00265890 [Amborella trichopoda]
          Length = 119

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 35/63 (55%), Positives = 49/63 (77%)
 Frame = -1

Query: 295 DNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIWQ 116
           D D+ EE+L++FDMNM YGPCIG++R++RW RANK G+NPP  V+ +L+ G    DC+W+
Sbjct: 57  DFDQCEEVLRRFDMNMSYGPCIGLTRLERWERANKLGMNPPKDVETLLKGGNAGLDCLWE 116

Query: 115 DRV 107
            RV
Sbjct: 117 GRV 119


>ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608934 [Citrus sinensis]
          Length = 122

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 35/63 (55%), Positives = 51/63 (80%)
 Frame = -1

Query: 295 DNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIWQ 116
           D D+ EE+L+QFDMNM YGPCIG+SR+ RW RA + GLNPP +++ +L++  V+ +C+W+
Sbjct: 60  DYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLGLNPPKEIEVLLKTRKVQAECLWE 119

Query: 115 DRV 107
           DRV
Sbjct: 120 DRV 122


>ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citrus clementina]
           gi|557539593|gb|ESR50637.1| hypothetical protein
           CICLE_v10033086mg [Citrus clementina]
          Length = 122

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 35/63 (55%), Positives = 51/63 (80%)
 Frame = -1

Query: 295 DNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIWQ 116
           D D+ EE+L+QFDMNM YGPCIG+SR+ RW RA + GLNPP +++ +L++  V+ +C+W+
Sbjct: 60  DYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLGLNPPKEIEVLLKTRKVQAECLWE 119

Query: 115 DRV 107
           DRV
Sbjct: 120 DRV 122


>ref|XP_002972420.1| hypothetical protein SELMODRAFT_441751 [Selaginella moellendorffii]
           gi|300159887|gb|EFJ26506.1| hypothetical protein
           SELMODRAFT_441751 [Selaginella moellendorffii]
          Length = 489

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 33/64 (51%), Positives = 51/64 (79%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           +D D+ EE+L+QFD++ K+GPC+G+SRI+RW RA +HGL PP  ++D+LE  G + +C+W
Sbjct: 426 EDEDDVEEMLRQFDLDAKFGPCVGLSRIERWERAQRHGLCPPQNIRDVLERVGGEPNCLW 485

Query: 118 QDRV 107
           + RV
Sbjct: 486 EGRV 489


>ref|XP_002984250.1| hypothetical protein SELMODRAFT_445786 [Selaginella moellendorffii]
           gi|300148099|gb|EFJ14760.1| hypothetical protein
           SELMODRAFT_445786 [Selaginella moellendorffii]
          Length = 471

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 33/64 (51%), Positives = 51/64 (79%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           +D D+ EE+L+QFD++ K+GPC+G+SRI+RW RA +HGL PP  ++D+LE  G + +C+W
Sbjct: 408 EDEDDVEEMLRQFDLDAKFGPCVGLSRIERWERAQRHGLCPPQNIRDVLERVGGEPNCLW 467

Query: 118 QDRV 107
           + RV
Sbjct: 468 EGRV 471


>ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Capsella rubella]
           gi|482573010|gb|EOA37197.1| hypothetical protein
           CARUB_v10010654mg [Capsella rubella]
          Length = 124

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 33/63 (52%), Positives = 53/63 (84%)
 Frame = -1

Query: 295 DNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIWQ 116
           D  + EE+L+QFDM++ YGPC+G++R+DRW RA + G+NPP++++ +L++G V+QDC+WQ
Sbjct: 62  DYGKEEEMLRQFDMDIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQDCLWQ 121

Query: 115 DRV 107
            RV
Sbjct: 122 GRV 124


>gb|EPS67252.1| hypothetical protein M569_07529, partial [Genlisea aurea]
          Length = 72

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 35/64 (54%), Positives = 49/64 (76%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD +ERE++L++FDMNM YGPC+G+SR+ RW RA   GL+PP +V ++L SG    DC+W
Sbjct: 9   DDWEEREDVLRRFDMNMAYGPCLGMSRLARWERAVALGLSPPKEVNELLSSGKANADCLW 68

Query: 118 QDRV 107
           + RV
Sbjct: 69  EGRV 72


>gb|ESW31010.1| hypothetical protein PHAVU_002G201200g [Phaseolus vulgaris]
          Length = 118

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 31/64 (48%), Positives = 51/64 (79%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           D+ DE+E +L+QFD+N+ YGPC+G++R+ RW RA + GLNPP +++ +L+SG V+ + +W
Sbjct: 55  DEYDEKETLLRQFDLNIAYGPCVGITRLARWERAQRFGLNPPPEIQSLLKSGNVQTESLW 114

Query: 118 QDRV 107
            DR+
Sbjct: 115 GDRI 118


>gb|EOY10253.1| Polymerase delta 4, putative [Theobroma cacao]
          Length = 127

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 34/64 (53%), Positives = 52/64 (81%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD+DE+EE+L+QFDMNM YGPC+G++R+ RW RA + GLNPP +++++L+ G VK + ++
Sbjct: 64  DDSDEQEEVLRQFDMNMVYGPCLGITRMARWERAQRLGLNPPKEIENLLKGGTVKLESLF 123

Query: 118 QDRV 107
             RV
Sbjct: 124 DGRV 127


>gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao]
          Length = 178

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 34/64 (53%), Positives = 51/64 (79%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD DE+EE+L+QFDMNM YGPC+G++R+ RW RA + GLNPP +++++L+ G VK + ++
Sbjct: 115 DDFDEQEEVLRQFDMNMAYGPCLGITRMARWERAQRLGLNPPKEIENLLKGGKVKLESLF 174

Query: 118 QDRV 107
             RV
Sbjct: 175 DGRV 178


>gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus persica]
          Length = 128

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 34/64 (53%), Positives = 48/64 (75%)
 Frame = -1

Query: 298 DDNDEREEILKQFDMNMKYGPCIGVSRIDRWNRANKHGLNPPSKVKDILESGGVKQDCIW 119
           DD DE+E +L+QFDMNM YGPC+G++R++RW RA   GLNPP +V+ +L  G V  +C+W
Sbjct: 65  DDYDEQEALLRQFDMNMAYGPCVGMTRLERWERACILGLNPPKEVESLLTGGKVCCECLW 124

Query: 118 QDRV 107
             R+
Sbjct: 125 DGRI 128


Top