BLASTX nr result

ID: Ephedra26_contig00019000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00019000
         (710 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006424696.1| hypothetical protein CICLE_v10027794mg [Citr...    57   8e-06
ref|XP_006424695.1| hypothetical protein CICLE_v10027794mg [Citr...    57   8e-06

>ref|XP_006424696.1| hypothetical protein CICLE_v10027794mg [Citrus clementina]
           gi|557526630|gb|ESR37936.1| hypothetical protein
           CICLE_v10027794mg [Citrus clementina]
          Length = 718

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 22/248 (8%)
 Frame = -2

Query: 709 RKNELQNIWQHVWRRLRRSTYNGSGSKRKSDIRLR---KSMHGNG---ETIKKGYLPRAN 548
           RKNEL+N+WQHVWRR   S+ +GSGS  +S  + +   KS   NG   ++     L   +
Sbjct: 27  RKNELKNLWQHVWRRCHSSSGSGSGSGSESGTQTKKSAKSKSNNGSENDSSSGDELENGS 86

Query: 547 NVIEIDCDED---------VPKA----SPHNVS---KGIPGSLGANNIAAKEHDYSLFDL 416
           N + I    D           KA    SP  +S   +    S+ A  I  K   +S   +
Sbjct: 87  NGLSIRDGSDNGSGTQSSWTKKAAEVDSPQPISPRYQSADDSICAQVIHTKPESFSNGWV 146

Query: 415 NRSENVCSTRRKDKESPFSVSFNISKAGSNEPDSKIAIQLDKKSVLQDGKSQGSIARKEA 236
           + +E      + ++    ++   +    S   D K   Q +KKS  Q  K +  +   ++
Sbjct: 147 HLNEPKDGLEQDEQPDGVAMHKGLEMQVSENADLKCDCQHEKKSTQQTSKKKIKLPEVDS 206

Query: 235 NALKSKKFEAIKVGSEEDEDDNFGNRRFLQQNRPSAFSWYNSCNENEMVEHVKDNAKPDG 56
               +K+ E        D ++  G RR    ++ ++ S  N+ + N   E ++D   P G
Sbjct: 207 KPFDNKQLEV-------DNENICGKRR----DQATSTSSANANHANPHAE-IRDFDTPSG 254

Query: 55  SCDSSMNK 32
             D S+ K
Sbjct: 255 PSDISLVK 262


>ref|XP_006424695.1| hypothetical protein CICLE_v10027794mg [Citrus clementina]
           gi|557526629|gb|ESR37935.1| hypothetical protein
           CICLE_v10027794mg [Citrus clementina]
          Length = 873

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 22/248 (8%)
 Frame = -2

Query: 709 RKNELQNIWQHVWRRLRRSTYNGSGSKRKSDIRLR---KSMHGNG---ETIKKGYLPRAN 548
           RKNEL+N+WQHVWRR   S+ +GSGS  +S  + +   KS   NG   ++     L   +
Sbjct: 180 RKNELKNLWQHVWRRCHSSSGSGSGSGSESGTQTKKSAKSKSNNGSENDSSSGDELENGS 239

Query: 547 NVIEIDCDED---------VPKA----SPHNVS---KGIPGSLGANNIAAKEHDYSLFDL 416
           N + I    D           KA    SP  +S   +    S+ A  I  K   +S   +
Sbjct: 240 NGLSIRDGSDNGSGTQSSWTKKAAEVDSPQPISPRYQSADDSICAQVIHTKPESFSNGWV 299

Query: 415 NRSENVCSTRRKDKESPFSVSFNISKAGSNEPDSKIAIQLDKKSVLQDGKSQGSIARKEA 236
           + +E      + ++    ++   +    S   D K   Q +KKS  Q  K +  +   ++
Sbjct: 300 HLNEPKDGLEQDEQPDGVAMHKGLEMQVSENADLKCDCQHEKKSTQQTSKKKIKLPEVDS 359

Query: 235 NALKSKKFEAIKVGSEEDEDDNFGNRRFLQQNRPSAFSWYNSCNENEMVEHVKDNAKPDG 56
               +K+ E        D ++  G RR    ++ ++ S  N+ + N   E ++D   P G
Sbjct: 360 KPFDNKQLEV-------DNENICGKRR----DQATSTSSANANHANPHAE-IRDFDTPSG 407

Query: 55  SCDSSMNK 32
             D S+ K
Sbjct: 408 PSDISLVK 415


Top