BLASTX nr result
ID: Ephedra26_contig00018999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00018999
(673 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 87 1e-29
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 77 3e-28
gb|ABW74566.1| integrase [Boechera divaricarpa] 76 6e-28
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 80 6e-28
emb|CBI37296.3| unnamed protein product [Vitis vinifera] 82 2e-27
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ... 77 6e-27
gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ... 84 8e-27
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera] 75 8e-27
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran... 81 1e-26
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera] 76 1e-26
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera] 79 1e-26
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 73 2e-26
emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera] 74 2e-26
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 72 4e-26
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran... 79 5e-26
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669... 72 5e-26
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 80 7e-26
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 74 8e-26
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 72 1e-25
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 72 1e-25
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 87.4 bits (215), Expect(2) = 1e-29
Identities = 49/143 (34%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Frame = -2
Query: 630 KCYLTNLEI-SNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVK-CKKYILAKLQRKP 460
KC N+E ++LWH + GH+ + L+++ + HGL N+ K C++ +L+K R
Sbjct: 476 KCLQVNIEDKASLWHLRFGHLHHGGLKELAKKNMVHGLPNMDYEGKFCEECVLSKHVRTS 535
Query: 459 FNNKTRT-A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEI 283
F K + A + LE+IH+D+CG IT +++ KRY + F +D+S+ T + +K+KS+ FE+
Sbjct: 536 FPKKAQYWAKQPLELIHTDICGPITPESFSGKRYFITFIDDFSRKTWVYFLKEKSEAFEV 595
Query: 282 FVNFRKKVQMEKNLKISCLRTDK 214
F F+ V+ + +I +R+D+
Sbjct: 596 FKKFKVMVERTTDKQIKAVRSDR 618
Score = 68.9 bits (167), Expect(2) = 1e-29
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G E+TS F +C ++ IR LT PYTP NG+AERKNRT+++++RS+L S ++ +W
Sbjct: 619 GGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSMLKSKKMPKEFWA 678
Query: 34 EAAKLVTYLLN 2
EA + Y+ N
Sbjct: 679 EAVQCAIYVQN 689
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 77.4 bits (189), Expect(2) = 3e-28
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Frame = -2
Query: 627 CYLTNL-EISNLWHNQLGHIS-NTYLEKITLAIAHGLKNLVATVK-CKKYILAKLQRKPF 457
C LT + E WH +LGHI+ T + L + GL + K C+ ++ K R F
Sbjct: 322 CLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQTRNSF 381
Query: 456 NNKT-RTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIF 280
+ T + + LE++H+DLCG I+ +T Q RYI +D ++ L+K+KS++FE F
Sbjct: 382 PSATPHRSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMWSILLKEKSEVFEKF 441
Query: 279 VNFRKKVQMEKNLKISCLRTDK 214
F+ V+ E N I LRTD+
Sbjct: 442 KTFKALVEKEVNKVIVTLRTDR 463
Score = 74.3 bits (181), Expect(2) = 3e-28
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS +F +C IR LT PYTP NG+ ER+NRTL+E+ RS+L + + WG
Sbjct: 464 GGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNVPNYMWG 523
Query: 34 EAAKLVTYLLN 2
EA + TYL+N
Sbjct: 524 EAVRHATYLIN 534
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 76.3 bits (186), Expect(2) = 6e-28
Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Frame = -2
Query: 639 LDTKCYLTNL-EISNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVKCKKYILAKLQR 466
++TK + + +IS L H + GH+ L + + GL + A C+ + K R
Sbjct: 265 VETKALVAKVSDISKLLHLRYGHLHENGLRVLNQKDMVIGLPKIGALKLCEGCVYGKQSR 324
Query: 465 KPFN-NKTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIF 289
+ F + R A + LE++H+DLCG + A+ +Y L ++DYS+++ + +K K + F
Sbjct: 325 RSFPVGRARRATQYLEIVHADLCGPMQTASLGGSKYFLMLTDDYSRMSWVYFLKSKGEAF 384
Query: 288 EIFVNFRKKVQMEKNLKISCLRTDK 214
++F NF+ V+ + ++ LRTD+
Sbjct: 385 DMFKNFKALVEKQSEQQVKVLRTDR 409
Score = 74.7 bits (182), Expect(2) = 6e-28
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS +FN FC K+ I ELT YTP NG+AERKN T++E+ RS+L L +W
Sbjct: 410 GGEFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWA 469
Query: 34 EAAKLVTYLLN 2
E+ + YLLN
Sbjct: 470 ESVRTAVYLLN 480
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 80.5 bits (197), Expect(2) = 6e-28
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Frame = -2
Query: 627 CYLTNLEISNLWHNQLGHISNTYLEKITLAIAHGLKNLVATVK----CKKYILAKLQRKP 460
CY + S LWH + GH++ LE+ LA +++L + C++ ++ K RK
Sbjct: 377 CYTDS---SWLWHLRFGHLNFDGLER--LAKKEMVRDLPSINHPDQLCERCLIGKQFRKS 431
Query: 459 FNNKTRT-A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEI 283
F ++ T A + LE+IH+D+CG I ++ + +Y L F +DYS+ T + +K+KS++FE
Sbjct: 432 FPKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTWVYFLKEKSEVFEN 491
Query: 282 FVNFRKKVQMEKNLKISCLRTDK 214
F F+ V+ E L I +R+D+
Sbjct: 492 FKKFKALVEKESGLSIKAMRSDR 514
Score = 70.5 bits (171), Expect(2) = 6e-28
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTSN+FN +C IR LTVP +P NG+AERKNRT++ ++RS+L S ++ +W
Sbjct: 515 GGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRSMLKSKKMLKEFWA 574
Query: 34 EAAKLVTYLLN 2
+A YL N
Sbjct: 575 KAVACAVYLTN 585
>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
Length = 3048
Score = 81.6 bits (200), Expect(2) = 2e-27
Identities = 47/147 (31%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Frame = -2
Query: 642 PLDTKCYLTNLE-ISNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVK-CKKYILAKL 472
P+ + C+ T E I LWH + GH+S L+ + + +GL K CK ++ K
Sbjct: 437 PISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGKQ 496
Query: 471 QRKPFNNKTR-TA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSK 295
R K+ A L+++H+D+CG I + ++KRY+L F++D+S+ T + + +KS+
Sbjct: 497 HRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKSE 556
Query: 294 IFEIFVNFRKKVQMEKNLKISCLRTDK 214
F +F +F+ V+ E + + CLRTD+
Sbjct: 557 AFAVFKSFKTYVEKETSSFLRCLRTDR 583
Score = 67.8 bits (164), Expect(2) = 2e-27
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS EF FC IR +LT YTP NG+AERKNRT++ ++RS+L + +L +W
Sbjct: 584 GGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKLPKTFWP 643
Query: 34 EAAKLVTYLLN 2
EA ++LN
Sbjct: 644 EAVNWTVHVLN 654
>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1150
Score = 76.6 bits (187), Expect(2) = 6e-27
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Frame = -2
Query: 633 TKCYLTNLEISNLWHNQLGHIS-NTYLEKITLAIAHGLKNLVATVK---CKKYILAKLQR 466
T+ +LT + S+ WH +LGH++ +T + + G + ++K C +L K R
Sbjct: 296 TRLHLTTISESSRWHARLGHVNFDTIKSMMQKELVQGFS--LGSIKKELCSSCLLGKQTR 353
Query: 465 KPFNNKTR-TA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIF 289
F T A + LE++H DLCG IT +T RY+ +D+S+ L+K+KS+ F
Sbjct: 354 LAFPKATLFRAAKILELVHGDLCGPITPSTAAGNRYVFVLIDDHSRYMWTILLKEKSEAF 413
Query: 288 EIFVNFRKKVQMEKNLKISCLRTDK 214
F F+ V+ E +I RTD+
Sbjct: 414 NKFRKFKSLVEQESGARIQTFRTDR 438
Score = 70.9 bits (172), Expect(2) = 6e-27
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EF S EFN C + I+ LT PYTP NG+ ER+NRTL+E+ RS++ + WG
Sbjct: 439 GGEFVSQEFNNLCQESGIKRHLTAPYTPQQNGVVERRNRTLLEMTRSIMKHMHVPNYLWG 498
Query: 34 EAAKLVTYLLN 2
E + TYLLN
Sbjct: 499 EGIRHSTYLLN 509
>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
Length = 2375
Score = 83.6 bits (205), Expect(2) = 8e-27
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Frame = -2
Query: 597 LWHNQLGHISNTYLEKITLA---IAHGLK----NLVATVKCKKYILAKLQRKPF----NN 451
LWH +LGH+SN L +TL+ + GL N + C+ + +K+ + PF +N
Sbjct: 407 LWHRRLGHLSNKNL--VTLSKNNMVSGLNIRNSNCNESQICEVCVKSKITKLPFGKRSDN 464
Query: 450 KTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNF 271
KT R LE+IHSDLCG IT T++ KRY L F +DY+ +L+K KS++FE F F
Sbjct: 465 KTT---RVLELIHSDLCGPITPETHDGKRYFLTFLDDYTHFCVVYLLKSKSEVFEYFKCF 521
Query: 270 RKKVQMEKNLKISCLRTD 217
V KI+ L+ D
Sbjct: 522 ESMVSAMFGTKIATLKCD 539
Score = 63.5 bits (153), Expect(2) = 8e-27
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G+E+ N+ FC K I + T+PYTP NG AER NRTL+E R+++ S+LS WG
Sbjct: 541 GREYLPNDLVSFCKGKGIIIKTTIPYTPEQNGKAERLNRTLLEKARAMILESELSKDLWG 600
Query: 34 EAAKLVTYLLN 2
EA Y+ N
Sbjct: 601 EAILCAAYVTN 611
>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 74.7 bits (182), Expect(2) = 8e-27
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Frame = -2
Query: 633 TKCYLTNLEISNLWHNQLGHISNTYLEKITLA--IAHGLKNLVATVKCKKYILAKLQRKP 460
T Y+ + LWHN+L H+ + +++I IA K KC+ + +K+ +KP
Sbjct: 320 TSAYMCDSNSLILWHNRLAHVGLSTIKRIVKCGLIACDTKKFE---KCEICVKSKMIKKP 376
Query: 459 FNNKTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIF 280
F++ R++ L++IHSDLC T RY L F +D S+ T FL+K KS+ F F
Sbjct: 377 FHSVERSS-NLLDLIHSDLCELNGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAF 435
Query: 279 VNFRKKVQMEKNLKISCLRTDK 214
++ +V+ + I LR+D+
Sbjct: 436 KVYKAEVENQLGKNIKVLRSDR 457
Score = 72.4 bits (176), Expect(2) = 8e-27
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G E+ S+EFN FC + I E T PYTP NGIAERKNRT +E++ ++L ++L+ WG
Sbjct: 458 GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWG 517
Query: 34 EAAKLVTYLLN 2
EA + Y+LN
Sbjct: 518 EALLIACYILN 528
>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974954|gb|EFV58419.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1003
Score = 81.3 bits (199), Expect(2) = 1e-26
Identities = 45/154 (29%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Frame = -2
Query: 672 SKHNGLFVM*PLDTKCYLTNLEISNLWHNQLGHISNTYLEKITLAIAHGL-KNLVATVKC 496
+++NGL+ + D + +T ++ +LWH QLGH+S ++ + A G+ + + C
Sbjct: 92 TQYNGLYRLNRCD-QWAMTVHDVPDLWHRQLGHLSRGSMKLLQDGQATGIPSDAITKTDC 150
Query: 495 KKYILAKLQRKPF-NNKTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*C 319
+ K R PF + T+ + LE++HSD+CG + A+ RY L F +D+S+ +
Sbjct: 151 VTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFV 210
Query: 318 FLIKKKSKIFEIFVNFRKKVQMEKNLKISCLRTD 217
+ +K K+++ F +F V+ + + ++ CLRTD
Sbjct: 211 YFLKHKNEVLSKFKDFIAMVERQTSKRVKCLRTD 244
Score = 65.1 bits (157), Expect(2) = 1e-26
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G+E+ +N F F +K IR E T+P TP NG+AER NRTL+E R++L + LS W
Sbjct: 246 GREYVNNMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWA 305
Query: 34 EAAKLVTYLLN 2
EA YL N
Sbjct: 306 EAVGTANYLRN 316
>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
Length = 791
Score = 75.9 bits (185), Expect(2) = 1e-26
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Frame = -2
Query: 633 TKCYLTNLEISNLWHNQLGHISNTYLEKITLA--IAHGLKNLVATVKCKKYILAKLQRKP 460
T Y+ + LWHN+L H+ + +++I IA K KC+ + +K+ +KP
Sbjct: 408 TSAYMCDSNSLILWHNRLAHVGLSIIKRIVKCGLIACDTKKFE---KCEICVKSKMIKKP 464
Query: 459 FNNKTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIF 280
F++ R++ L++IHSDLC T RY L F +D S+ T FL+K KS+ F F
Sbjct: 465 FHSVERSS-NLLDLIHSDLCELNGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAF 523
Query: 279 VNFRKKVQMEKNLKISCLRTDK 214
+ KV+ + I LR+D+
Sbjct: 524 KVYNAKVENQLGKNIKVLRSDR 545
Score = 70.5 bits (171), Expect(2) = 1e-26
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G E+ S+EFN FC + I E T PYTP NGIAERKNRT +E++ ++L ++L+ WG
Sbjct: 546 GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWG 605
Query: 34 EAAKLVTYLLN 2
EA + ++LN
Sbjct: 606 EALLIACHILN 616
>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 79.0 bits (193), Expect(2) = 1e-26
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Frame = -2
Query: 609 EISNLWHNQLGHISNTYLEKITLAIAHGLKNL----VATVKCKKYILAKLQRKPF-NNKT 445
++S LWH + GH++ L+ TL H + L + + C++ ++ K R F K+
Sbjct: 313 DLSWLWHLRYGHLNFGGLK--TLQQKHMVTGLPQISIPSQVCEECVVGKQHRSQFPQGKS 370
Query: 444 RTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNFRK 265
R A LE++HSD+CG I + K+Y++ F +DYS+ T +++KS+ F F +F+
Sbjct: 371 RRAKNVLELVHSDICGLINPTSNGGKKYLIIFIDDYSRKTWVSFLQEKSEAFSAFKSFKA 430
Query: 264 KVQMEKNLKISCLRTDK 214
+V+ E I LRTD+
Sbjct: 431 RVEKETGRSIKILRTDR 447
Score = 67.4 bits (163), Expect(2) = 1e-26
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G E+ SNEF FC + IR ELT YTP NG++ERKNRT++ ++RSLL ++ +W
Sbjct: 448 GGEYCSNEFEHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNMVRSLLARGKIPKSFWP 507
Query: 34 EAAKLVTYLLN 2
EA ++LN
Sbjct: 508 EAINWSIHVLN 518
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 73.2 bits (178), Expect(2) = 2e-26
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Frame = -2
Query: 609 EISNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVK-CKKYILAKLQRKPFNNKTRT- 439
E S LWH + GH++ LE ++ + GL + + C+ +L K + F ++ +
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 438 A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNFRKKV 259
A + LE+IH+D+CG I + + Y L F +D+S+ T + +K+KS++FEIF F+ V
Sbjct: 523 AQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 258 QMEKNLKISCLRTDK 214
+ E L I +R+D+
Sbjct: 583 EKESGLVIKTMRSDR 597
Score = 72.4 bits (176), Expect(2) = 2e-26
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS EF +C IR +LTVP +P NG+AERKNRT++E+ RS+L S +L W
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWA 657
Query: 34 EAAKLVTYLLN 2
EA YLLN
Sbjct: 658 EAVACAVYLLN 668
>emb|CAN76379.1| hypothetical protein VITISV_017862 [Vitis vinifera]
Length = 639
Score = 73.6 bits (179), Expect(2) = 2e-26
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Frame = -2
Query: 627 CYLTNLE-ISNLWHNQLGHISNTYLEKI-TLAIAHGLKNLVAT-VKCKKYILAKLQRKPF 457
C+ T +E +S+LW+ + GH+S+ L + + +GL A+ C ++ R P
Sbjct: 404 CFHTTIEDLSHLWYCRYGHLSHKGLRTLQNNKMVNGLPQFEASKTVCTDCMVGTQHRNPI 463
Query: 456 NNK-TRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIF 280
K T A L++IH+D+CG IT ++KRY++ F +D+S+ +L+ +KSK IF
Sbjct: 464 PKKSTWRACSKLQLIHADICGPITPILNSKKRYLISFIDDFSRKAWIYLLVEKSKALVIF 523
Query: 279 VNFRKKVQMEKNLKISCLRTDK 214
++ V+ E + I CLR ++
Sbjct: 524 KQYKSCVEKETSSYIKCLRINR 545
Score = 72.0 bits (175), Expect(2) = 2e-26
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS +FN FC + I+ +L V YTP NG+AERKNRT++ ++RS+L +L +W
Sbjct: 546 GGEFTSQDFNEFCKENGIKRQLIVAYTPQQNGVAERKNRTIMNMVRSMLSKKKLPKTFWP 605
Query: 34 EAAKLVTYLLN 2
EA Y+LN
Sbjct: 606 EAVNWTVYILN 616
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 72.4 bits (176), Expect(2) = 4e-26
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Frame = -2
Query: 609 EISNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVK-CKKYILAKLQRKPFNNKTRT- 439
E S LWH + GH++ LE ++ + GL + + C+ +L K + F ++ +
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 438 A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNFRKKV 259
A + LE+IH+D+CG I + + Y L F +D+S+ T + +K+KS++FEIF F+ V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 258 QMEKNLKISCLRTDK 214
+ E L I +R+D+
Sbjct: 583 EKESGLVIKTMRSDR 597
Score = 72.4 bits (176), Expect(2) = 4e-26
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS EF +C IR +LTVP +P NG+AERKNRT++E+ RS+L S +L W
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWA 657
Query: 34 EAAKLVTYLLN 2
EA YLLN
Sbjct: 658 EAVACAVYLLN 668
>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974460|gb|EFV57947.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1324
Score = 79.3 bits (194), Expect(2) = 5e-26
Identities = 44/154 (28%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Frame = -2
Query: 672 SKHNGLFVM*PLDTKCYLTNLEISNLWHNQLGHISNTYLEKITLAIAHGL-KNLVATVKC 496
+++NGL+ + D + +T ++ +LWH +LGH+S ++ + A G+ + + C
Sbjct: 399 TQYNGLYRLNRCD-QWAMTVHDVPDLWHRRLGHLSRGSMKLLQDGQATGIPSDAITKTDC 457
Query: 495 KKYILAKLQRKPF-NNKTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*C 319
+ K R PF + T+ + LE++HSD+CG + A+ RY L F +D+S+ +
Sbjct: 458 VTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFV 517
Query: 318 FLIKKKSKIFEIFVNFRKKVQMEKNLKISCLRTD 217
+ +K K+++ F +F V+ + + ++ CLRTD
Sbjct: 518 YFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTD 551
Score = 65.1 bits (157), Expect(2) = 5e-26
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G+E+ +N F F +K IR E T+P TP NG+AER NRTL+E R++L + LS W
Sbjct: 553 GREYVNNMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWA 612
Query: 34 EAAKLVTYLLN 2
EA YL N
Sbjct: 613 EAVGTANYLRN 623
>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
Length = 711
Score = 72.4 bits (176), Expect(2) = 5e-26
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTSN+FN +C IR LTVP +P NG+AERKNRT++ ++RS+L S ++ +W
Sbjct: 471 GGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRSMLKSKKMPKEFWA 530
Query: 34 EAAKLVTYLLN 2
EA YL N
Sbjct: 531 EAVACAVYLTN 541
Score = 72.0 bits (175), Expect(2) = 5e-26
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = -2
Query: 498 CKKYILAKLQRKPFNNKTRT-A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT* 322
C+ ++ K RK F ++ T A + LE+IH+D+CG I ++ + +Y L F +DYS+ T
Sbjct: 375 CEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTW 434
Query: 321 CFLIKKKSKIFEIFVNFRKKVQMEKNLKISCLRTDK 214
+ +K+KS++FE F F+ V+ E L I +R+D+
Sbjct: 435 VYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDR 470
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 79.7 bits (195), Expect(2) = 7e-26
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Frame = -2
Query: 663 NGLFVM*PLDTKCYLTN----LEISNLWHNQLGHISNTYLEKITLAIAHGLKNLVATVKC 496
NGLFV+ + ++ +E +NLWH +LGH++ + K+ T KC
Sbjct: 441 NGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKC 500
Query: 495 KKYILAKLQRKPFNNKTRTA*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CF 316
I +K +KPF LE+I+SDL T A+ K Y + F +DYS+ T +
Sbjct: 501 PVCIESKFHKKPFKPVEYRTTELLELIYSDLADFRTTASRGGKNYYVSFVDDYSRFTKIY 560
Query: 315 LIKKKSKIFEIFVNFRKKVQMEKNLKISCLRTDK 214
LIK K++ +FV F+ + + + +I LR+D+
Sbjct: 561 LIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDR 594
Score = 64.3 bits (155), Expect(2) = 7e-26
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G E++ FC I E T PY+P NGIAERKNRTL E++ ++L SS LS WG
Sbjct: 595 GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWG 654
Query: 34 EAAKLVTYLLN 2
EA ++LN
Sbjct: 655 EAVLSACFILN 665
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 73.9 bits (180), Expect(2) = 8e-26
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Frame = -2
Query: 609 EISNLWHNQLGHISNTYLEKI-TLAIAHGLKNL-VATVKCKKYILAKLQRKPFNNKTRT- 439
E ++LWH + GH++ +E + TL I L V C + K R+ F K+++
Sbjct: 452 EQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEVIKGICAACEMGKQSRRSFPKKSQSN 511
Query: 438 A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNFRKKV 259
+ LE+IHSD+CG + + N RY L F +D+S++T + +K KS++ F F+ V
Sbjct: 512 TNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYV 571
Query: 258 QMEKNLKISCLRTD 217
+ + +I LRTD
Sbjct: 572 ENQSESRIKRLRTD 585
Score = 69.7 bits (169), Expect(2) = 8e-26
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EF S EF C + I E+T PY+P NG+AER+NRTL+E+ RS++ +LS +W
Sbjct: 587 GGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSNKFWA 646
Query: 34 EAAKLVTYLLN 2
EA TYL N
Sbjct: 647 EAIATSTYLQN 657
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 72.4 bits (176), Expect(2) = 1e-25
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Frame = -2
Query: 609 EISNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVK-CKKYILAKLQRKPFNNKTRT- 439
E S LWH + GH++ LE ++ + GL + + C+ +L K + F ++ +
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 438 A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNFRKKV 259
A + LE+IH+D+CG I + + Y L F +D+S+ T + +K+KS++FEIF F+ V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 258 QMEKNLKISCLRTDK 214
+ E L I +R+D+
Sbjct: 583 EKESGLVIKTMRSDR 597
Score = 70.9 bits (172), Expect(2) = 1e-25
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS EF +C IR +LTVP +P NG+ ERKNRT++E+ RS+L S +L W
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWA 657
Query: 34 EAAKLVTYLLN 2
EA YLLN
Sbjct: 658 EAVACAVYLLN 668
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 72.4 bits (176), Expect(2) = 1e-25
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Frame = -2
Query: 609 EISNLWHNQLGHISNTYLEKITLA-IAHGLKNLVATVK-CKKYILAKLQRKPFNNKTRT- 439
E S LWH + GH++ LE ++ + GL + + C+ +L K + F ++ +
Sbjct: 463 EESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 438 A*RCLEMIHSDLCGSITHATYNQKRYILFFSNDYSKLT*CFLIKKKSKIFEIFVNFRKKV 259
A + LE+IH+D+CG I + + Y L F +D+S+ T + +K+KS++FEIF F+ V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 258 QMEKNLKISCLRTDK 214
+ E L I +R+D+
Sbjct: 583 EKESGLVIKTMRSDR 597
Score = 70.9 bits (172), Expect(2) = 1e-25
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = -1
Query: 214 GKEFTSNEFNGFC*KKKIRGELTVPYTP**NGIAERKNRTLIEILRSLLFSSQLSTPWWG 35
G EFTS EF +C IR +LTVP +P NG+ ERKNRT++E+ RS+L S +L W
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWA 657
Query: 34 EAAKLVTYLLN 2
EA YLLN
Sbjct: 658 EAVACAVYLLN 668