BLASTX nr result

ID: Ephedra26_contig00018954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018954
         (1344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16125.1| unknown [Picea sitchensis]                             117   1e-23
ref|XP_006345055.1| PREDICTED: kinesin light chain-like [Solanum...    64   1e-07
ref|XP_006844980.1| hypothetical protein AMTR_s00058p00186720 [A...    60   3e-06

>gb|ABR16125.1| unknown [Picea sitchensis]
          Length = 824

 Score =  117 bits (292), Expect = 1e-23
 Identities = 108/327 (33%), Positives = 138/327 (42%), Gaps = 57/327 (17%)
 Frame = +3

Query: 534  MPGLVSSETMEA----------GVKSDVEIGNGENHKSPRSPLSPRG------------- 644
            MPGLVS++ ME            +KS+      EN+KSPRSPLSP+              
Sbjct: 1    MPGLVSADAMEEEQQQQRSPVKNIKSE-----SENNKSPRSPLSPKSPTSMSKSPNSPHQ 55

Query: 645  -----NNTNNSGENEIPQASIEQLYENVRGMKSPGD-XXXXXXXXXXXXXDDSRIDSELQ 806
                 NN+N          SIE+LYENV  MKS GD              +D RI+SELQ
Sbjct: 56   QNSVDNNSNRENGAGNANTSIEELYENVCQMKSSGDQSPSRPSSTEQSEVEDFRIESELQ 115

Query: 807  HLAGVEK---------------------GKDRXXXXXXXXXXXXXXXXIAKSSGKETQTP 923
             L G E                       K                   A+S GKE  + 
Sbjct: 116  QLVGGENPSKPSSSSKPVKEEEKPIKEGEKPIKDGRTPRKDNKIVSNGAARSGGKEISSE 175

Query: 924  SKITSSADKSKNAPERSSRPVTINQPKKPPKLVVNSD---KGTPSPNKVTPKSLLNTPTS 1094
            SK  SS DK+K   +R +R V+  Q +KP KLV++SD   K +PSP+KV+ ++  NTP  
Sbjct: 176  SKKASSLDKNKIVQDRPTRSVSSIQSRKPIKLVISSDVPTKASPSPSKVSGRNTPNTPAK 235

Query: 1095 KPKLDDTPKXXXXXXXXXXXXXTPEETXXXXXXXXXXTPLQKKLFGSPRK---STTPSPV 1265
                    +              P +              QKKLF SP K     +PSP+
Sbjct: 236  TSSKQQQQQSKSSSDQNSERNPNPRD-------ENSPAVTQKKLFVSPDKPPRKLSPSPM 288

Query: 1266 PKRRLSSP-GLSKLQKSADSDINDMSE 1343
             +RRLSSP GLSK Q  AD    +MSE
Sbjct: 289  ARRRLSSPSGLSKAQSEAD----EMSE 311


>ref|XP_006345055.1| PREDICTED: kinesin light chain-like [Solanum tuberosum]
          Length = 730

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 58/183 (31%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
 Frame = +3

Query: 534  MPGLVSSETMEAG-VKSDVEIGNGENHK-SPRSPLSPRGNNTNNSGENEIPQASIEQLYE 707
            MPG+V  E  E G +K   E GN  + K +    L+PR     + G+  + + SIE+LYE
Sbjct: 1    MPGVVMDEIHEVGEIKELKENGNSTSCKENEEGGLAPRNGGEEHVGDGVV-EPSIEELYE 59

Query: 708  NVRGMKSPGDXXXXXXXXXXXXXDDSRIDSELQHLAGVEKGKDRXXXXXXXXXXXXXXXX 887
            NV  M+S                D+SRIDSEL+HL G E  +                  
Sbjct: 60   NVCEMQSSDQSPSRHSFGSDG--DESRIDSELRHLVGGEMREVEIIEEDEEVQKPETEDS 117

Query: 888  IAKSSGKETQTPSKITSSADKSKNAPERSSRPVTINQPKKPPKLVVNSDKGTPSPNKVTP 1067
             + S  K      K TS   K  N+P  S +  +  QPK P +LV+ S+    S  K   
Sbjct: 118  RSDSGSK------KETSDDVKLDNSPSSSMKDPSSGQPKTPSQLVLESETSAKSNTKGRR 171

Query: 1068 KSL 1076
             SL
Sbjct: 172  ASL 174


>ref|XP_006844980.1| hypothetical protein AMTR_s00058p00186720 [Amborella trichopoda]
            gi|548847471|gb|ERN06655.1| hypothetical protein
            AMTR_s00058p00186720 [Amborella trichopoda]
          Length = 785

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 71/232 (30%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
 Frame = +3

Query: 525  VGKMPGLVS------SETMEAGVKSDVEIGNGENHKSPRSPLSPRGNNTN--------NS 662
            V  MPGLV       S   E G+  D ++     +KS RSPLSPR    +          
Sbjct: 6    VRSMPGLVMDVADKMSPVKEEGM--DHKVVGSSGNKSLRSPLSPRSPRIDALDLPMEGTP 63

Query: 663  GENEIPQASIEQLYENVRGMKSPGDXXXXXXXXXXXXX-DDSRIDSELQHLAGV----EK 827
                +   SIEQLY+NV  M+S GD              ++SRIDSEL HL GV    E+
Sbjct: 64   THECMIDTSIEQLYDNVCQMRSSGDQSPSRQSFGDGSDGNESRIDSELGHLVGVEIREEE 123

Query: 828  GKDRXXXXXXXXXXXXXXXXI--AKSSG-----KETQTPSKITSSADKSKNAPERSSRPV 986
            G++                 I   K +G     KE  + SK +   +K ++    SS P 
Sbjct: 124  GENIEEETKKLEKLKTENGSIYDQKENGSIIGQKENGSTSKKSGKEEKMRSG---SSTPS 180

Query: 987  TINQPKKPPKLVV----NSDKGTPSPNKVTPKSL----LNTPTSKPKLDDTP 1118
               QPKKP +LV+     S K +   N VT +++    LN  ++  K+   P
Sbjct: 181  MKIQPKKPSQLVLKNSPKSSKTSSRENNVTNENVDSKQLNEVSTSQKISFNP 232


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