BLASTX nr result

ID: Ephedra26_contig00018942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018942
         (414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25219.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
 Frame = -3

Query: 406 KISVHC-----IQSFRCLNVSLRFEGEDEKDSNNEVQRILQASNHFQALGVKTXXXXXXX 242
           KIS+H      +   +  NVS+R +  +    N+E++RI  A ++FQ L V         
Sbjct: 280 KISIHVADLEDLGRAQRFNVSVRCDSNEGLLQNSEIKRISGAKDYFQVLDVDRAASDQEL 339

Query: 241 XXAYRKCLVRLRYRDTDWRSTEKAEKVATAALNTLVDPASRALHLKRMKTQEESCRXXXX 62
             AYR+CL+R+++ D     +E A +VA  A   L+DPA R  +L++     ES      
Sbjct: 340 EKAYRRCLIRIQF-DHHGVGSENAIRVAEEAYVNLLDPARRDRYLRKSMEASESVVLNTC 398

Query: 61  XXXXXXXXKRIVVRRVRQ 8
                   ++ V+ RVR+
Sbjct: 399 SKTLISSEQKAVITRVRR 416


Top