BLASTX nr result
ID: Ephedra26_contig00018920
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00018920
(452 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004291655.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 61 2e-19
ref|XP_006827796.1| hypothetical protein AMTR_s00009p00266800 [A... 64 5e-19
gb|EXB76306.1| hypothetical protein L484_025664 [Morus notabilis] 59 8e-19
gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indi... 69 4e-18
ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group] g... 69 4e-18
gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japo... 69 4e-18
ref|XP_006658533.1| PREDICTED: ultraviolet-B receptor UVR8-like ... 74 4e-18
ref|XP_006348235.1| PREDICTED: probable E3 ubiquitin-protein lig... 59 5e-18
ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein lig... 60 5e-18
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu... 60 3e-17
ref|XP_006464721.1| PREDICTED: probable E3 ubiquitin-protein lig... 60 3e-17
ref|XP_006451921.1| hypothetical protein CICLE_v10008120mg [Citr... 60 3e-17
ref|XP_006464722.1| PREDICTED: probable E3 ubiquitin-protein lig... 60 3e-17
ref|XP_006297528.1| hypothetical protein CARUB_v10013551mg [Caps... 57 4e-17
ref|NP_566512.1| regulator of chromosome condensation 1 [Arabido... 57 4e-17
ref|XP_002882943.1| regulator of chromosome condensation family ... 57 4e-17
gb|AAK59406.1| unknown protein [Arabidopsis thaliana] 57 4e-17
ref|NP_001168691.1| putative regulator of chromosome condensatio... 69 4e-17
ref|XP_004244214.1| PREDICTED: probable E3 ubiquitin-protein lig... 59 6e-17
ref|XP_004244215.1| PREDICTED: probable E3 ubiquitin-protein lig... 59 6e-17
>ref|XP_004291655.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Fragaria vesca
subsp. vesca]
Length = 491
Score = 61.2 bits (147), Expect(3) = 2e-19
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVL DDGLV+ GWMGFGSLG TD
Sbjct: 379 VCARKRKTFVLMDDGLVYGCGWMGFGSLGFTD 410
Score = 53.1 bits (126), Expect(3) = 2e-19
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT P+ LS +
Sbjct: 338 DSSGFVYTWGKGYCGALGHGDEIDKTTPELLSRV 371
Score = 26.9 bits (58), Expect(3) = 2e-19
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQV 320
V+++G S++C GHGE F+P +++ KGI +V
Sbjct: 289 VYSFGTGSNFCLGHGEQHHE-FQPRAIQSFRRKGIHVVRV 327
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVL 317
VFT GDNSS CCGH + R IF+P VEA+KGI CKQV+
Sbjct: 183 VFTCGDNSSSCCGHKDTNRPIFRPRLVEAMKGIPCKQVV 221
>ref|XP_006827796.1| hypothetical protein AMTR_s00009p00266800 [Amborella trichopoda]
gi|548832416|gb|ERM95212.1| hypothetical protein
AMTR_s00009p00266800 [Amborella trichopoda]
Length = 486
Score = 63.5 bits (153), Expect(2) = 5e-19
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCARKRKTFVL DDG VFAFGWMGFGSLG +D
Sbjct: 373 HRAVQVCARKRKTFVLLDDGSVFAFGWMGFGSLGFSD 409
Score = 56.2 bits (134), Expect(2) = 5e-19
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDENDKT P+ L+++
Sbjct: 337 DSSGYVYTWGKGYCGALGHGDENDKTTPELLTSL 370
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS CCGHGEV IF+PT+V ALKGI CK+V
Sbjct: 182 VFTCGDNSSICCGHGEVRNAIFRPTQVVALKGIPCKEV 219
>gb|EXB76306.1| hypothetical protein L484_025664 [Morus notabilis]
Length = 492
Score = 57.8 bits (138), Expect(3) = 8e-19
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVL D G V+ FGWMGFGSLG D
Sbjct: 380 VCARKRKTFVLVDSGSVYGFGWMGFGSLGFPD 411
Score = 52.8 bits (125), Expect(3) = 8e-19
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT P+ LS++
Sbjct: 339 DSSGCVYTWGKGYCGALGHGDEIDKTKPELLSSL 372
Score = 28.5 bits (62), Expect(3) = 8e-19
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQV 320
V+++G S++C GHGE + F+P ++A KGI +V
Sbjct: 290 VYSFGSGSNFCLGHGE-QQAEFQPRIIQAFRRKGIHVVRV 328
Score = 58.9 bits (141), Expect(2) = 3e-07
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS CCGH + R IF+P VEALKG+ CKQV
Sbjct: 184 VFTCGDNSSSCCGHKDTSRPIFRPRLVEALKGVHCKQV 221
Score = 21.2 bits (43), Expect(2) = 3e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 452 GAETTQCIHMGRQFF 408
G+ETTQC+ R F
Sbjct: 145 GSETTQCVTFSRISF 159
>gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
Length = 907
Score = 63.2 bits (152), Expect(2) = 4e-18
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVLTD+G VFAFGWMGFGSLG D
Sbjct: 372 VCARKRKTFVLTDEGSVFAFGWMGFGSLGFPD 403
Score = 53.5 bits (127), Expect(2) = 4e-18
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D VYTWG+GYCGALG GDENDKT P+ +S++
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSL 364
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS CCGHGEVGR IF+PT ++ALKGI CKQV
Sbjct: 176 VFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQV 213
>ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|28564665|dbj|BAC57847.1| putative UVB-resistance
protein UVR8 [Oryza sativa Japonica Group]
gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa
Japonica Group] gi|215678781|dbj|BAG95218.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 484
Score = 63.2 bits (152), Expect(2) = 4e-18
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVLTD+G VFAFGWMGFGSLG D
Sbjct: 372 VCARKRKTFVLTDEGSVFAFGWMGFGSLGFPD 403
Score = 53.5 bits (127), Expect(2) = 4e-18
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D VYTWG+GYCGALG GDENDKT P+ +S++
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSL 364
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS CCGHGEVGR IF+PT ++ALKGI CKQV
Sbjct: 176 VFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQV 213
>gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
Length = 484
Score = 63.2 bits (152), Expect(2) = 4e-18
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVLTD+G VFAFGWMGFGSLG D
Sbjct: 372 VCARKRKTFVLTDEGSVFAFGWMGFGSLGFPD 403
Score = 53.5 bits (127), Expect(2) = 4e-18
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D VYTWG+GYCGALG GDENDKT P+ +S++
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSL 364
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS CCGHGEVGR IF+PT ++ALKGI CKQV
Sbjct: 176 VFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQV 213
>ref|XP_006658533.1| PREDICTED: ultraviolet-B receptor UVR8-like [Oryza brachyantha]
Length = 435
Score = 62.4 bits (150), Expect(2) = 4e-18
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFV+TD+G VFAFGWMGFGSLG D
Sbjct: 323 VCARKRKTFVITDEGSVFAFGWMGFGSLGFPD 354
Score = 54.3 bits (129), Expect(2) = 4e-18
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D VYTWG+GYCGALG GDENDKT P+ +S++
Sbjct: 282 DALGHVYTWGRGYCGALGHGDENDKTSPELISSL 315
Score = 73.6 bits (179), Expect = 3e-11
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGHGEVGR +F+PT++ ALKGIFCKQV
Sbjct: 126 VFTCGDNSSFCCGHGEVGRTVFRPTQINALKGIFCKQV 163
>ref|XP_006348235.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Solanum
tuberosum]
Length = 533
Score = 58.5 bits (140), Expect(3) = 5e-18
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCA KRKTFVL DDG V+ FGWMGFGSLG D
Sbjct: 426 HLAVQVCASKRKTFVLVDDGSVYGFGWMGFGSLGFLD 462
Score = 53.1 bits (126), Expect(3) = 5e-18
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT P +L+++
Sbjct: 390 DSTGYVYTWGKGYCGALGHGDEIDKTTPSHLTSL 423
Score = 24.6 bits (52), Expect(3) = 5e-18
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = -2
Query: 436 SVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK 341
+++++G +++C GHGE + +P +++ K
Sbjct: 340 TLYSFGSGTNFCLGHGEQQNEL-QPRAIQSFK 370
Score = 57.8 bits (138), Expect(2) = 1e-06
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSSYCCGH + GR IF P VEALK I KQV
Sbjct: 235 VFTCGDNSSYCCGHSDTGRPIFTPRMVEALKNIPVKQV 272
Score = 20.4 bits (41), Expect(2) = 1e-06
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 452 GAETTQCIHMGRQFF 408
G ETTQC+ R F
Sbjct: 196 GPETTQCVEFTRISF 210
>ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 491
Score = 60.1 bits (144), Expect(2) = 5e-18
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 115 HHWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
+H + VCARKRKTFVL D G+V+ FGWMGFGSLG D
Sbjct: 374 NHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPD 411
Score = 56.2 bits (134), Expect(2) = 5e-18
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKTIPQ L+++
Sbjct: 339 DSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSL 372
>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 497
Score = 59.7 bits (143), Expect(2) = 3e-17
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCARKRKTFVL D G VF FGWMGFGSLG D
Sbjct: 375 HLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPD 411
Score = 53.9 bits (128), Expect(2) = 3e-17
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT+P+ L+++
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSL 372
Score = 59.3 bits (142), Expect(2) = 3e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGH + R IF+P VEALKG+ CKQV
Sbjct: 184 VFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQV 221
Score = 20.8 bits (42), Expect(2) = 3e-07
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 452 GAETTQCIHMGRQFF 408
G ETTQC+ R F
Sbjct: 145 GPETTQCVSFSRITF 159
>ref|XP_006464721.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
X1 [Citrus sinensis]
Length = 489
Score = 58.2 bits (139), Expect(2) = 3e-17
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCARKRKTFVL D G V+ FGWMGFGSLG D
Sbjct: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
Score = 55.5 bits (132), Expect(2) = 3e-17
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT+P+ LS++
Sbjct: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGH + R IF+P VEALKG+ CKQV
Sbjct: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
>ref|XP_006451921.1| hypothetical protein CICLE_v10008120mg [Citrus clementina]
gi|557555147|gb|ESR65161.1| hypothetical protein
CICLE_v10008120mg [Citrus clementina]
Length = 489
Score = 58.2 bits (139), Expect(2) = 3e-17
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCARKRKTFVL D G V+ FGWMGFGSLG D
Sbjct: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
Score = 55.5 bits (132), Expect(2) = 3e-17
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT+P+ LS++
Sbjct: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGH + R IF+P VEALKG+ CKQV
Sbjct: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
>ref|XP_006464722.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
X2 [Citrus sinensis]
Length = 488
Score = 58.2 bits (139), Expect(2) = 3e-17
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCARKRKTFVL D G V+ FGWMGFGSLG D
Sbjct: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
Score = 55.5 bits (132), Expect(2) = 3e-17
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT+P+ LS++
Sbjct: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGH + R IF+P VEALKG+ CKQV
Sbjct: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
>ref|XP_006297528.1| hypothetical protein CARUB_v10013551mg [Capsella rubella]
gi|482566237|gb|EOA30426.1| hypothetical protein
CARUB_v10013551mg [Capsella rubella]
Length = 488
Score = 57.0 bits (136), Expect(2) = 4e-17
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVL + GL++ FGWMGFGSLG D
Sbjct: 380 VCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Score = 56.2 bits (134), Expect(2) = 4e-17
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNL 166
D+ RVYTWGKGYCGALG GDENDK PQ L
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQLL 369
>ref|NP_566512.1| regulator of chromosome condensation 1 [Arabidopsis thaliana]
gi|42572455|ref|NP_974323.1| regulator of chromosome
condensation 1 [Arabidopsis thaliana]
gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis
thaliana] gi|15795108|dbj|BAB02372.1| unnamed protein
product [Arabidopsis thaliana]
gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis
thaliana] gi|332642152|gb|AEE75673.1| regulator of
chromosome condensation 1 [Arabidopsis thaliana]
gi|332642153|gb|AEE75674.1| regulator of chromosome
condensation 1 [Arabidopsis thaliana]
Length = 488
Score = 57.0 bits (136), Expect(2) = 4e-17
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVL + GL++ FGWMGFGSLG D
Sbjct: 380 VCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Score = 56.2 bits (134), Expect(2) = 4e-17
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNL 166
D+ RVYTWGKGYCGALG GDENDK PQ L
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQVL 369
>ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata] gi|297328783|gb|EFH59202.1|
regulator of chromosome condensation family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 57.0 bits (136), Expect(2) = 4e-17
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVL + GL++ FGWMGFGSLG D
Sbjct: 380 VCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Score = 56.2 bits (134), Expect(2) = 4e-17
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNL 166
D+ RVYTWGKGYCGALG GDENDK PQ L
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQVL 369
>gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
Length = 488
Score = 57.0 bits (136), Expect(2) = 4e-17
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVL + GL++ FGWMGFGSLG D
Sbjct: 380 VCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Score = 56.2 bits (134), Expect(2) = 4e-17
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNL 166
D+ RVYTWGKGYCGALG GDENDK PQ L
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQVL 369
>ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays] gi|223950263|gb|ACN29215.1| unknown [Zea
mays] gi|414884497|tpg|DAA60511.1| TPA: putative
regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 483
Score = 60.5 bits (145), Expect(2) = 4e-17
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2
Query: 97 VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
VCARKRKTFVLTD+G V AFGWMGFGSLG D
Sbjct: 371 VCARKRKTFVLTDEGSVVAFGWMGFGSLGFLD 402
Score = 52.8 bits (125), Expect(2) = 4e-17
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D VYTWG+GYCGALG GDENDKT P+ + ++
Sbjct: 330 DALGHVYTWGRGYCGALGHGDENDKTSPELIGSL 363
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS CCGHGEVGR IF+P +VEALKGI CKQV
Sbjct: 175 VFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQV 212
>ref|XP_004244214.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
1 [Solanum lycopersicum]
Length = 539
Score = 58.5 bits (140), Expect(2) = 6e-17
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCA KRKTFVL DDG V+ FGWMGFGSLG D
Sbjct: 428 HLAVQVCASKRKTFVLVDDGSVYGFGWMGFGSLGFLD 464
Score = 54.3 bits (129), Expect(2) = 6e-17
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT P +L+++
Sbjct: 392 DSTGYVYTWGKGYCGALGHGDETDKTTPSHLTSL 425
Score = 56.6 bits (135), Expect(2) = 2e-06
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGH + GR IF+P VEALK I KQV
Sbjct: 237 VFTCGDNSSFCCGHRDTGRPIFRPRMVEALKNIPVKQV 274
Score = 20.4 bits (41), Expect(2) = 2e-06
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 452 GAETTQCIHMGRQFF 408
G ETTQC+ R F
Sbjct: 198 GPETTQCVEFTRISF 212
>ref|XP_004244215.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
2 [Solanum lycopersicum]
Length = 537
Score = 58.5 bits (140), Expect(2) = 6e-17
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2
Query: 112 HWLL*VCARKRKTFVLTDDGLVFAFGWMGFGSLGITD 2
H + VCA KRKTFVL DDG V+ FGWMGFGSLG D
Sbjct: 426 HLAVQVCASKRKTFVLVDDGSVYGFGWMGFGSLGFLD 462
Score = 54.3 bits (129), Expect(2) = 6e-17
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 258 DTEARVYTWGKGYCGALGLGDENDKTIPQNLSAI 157
D+ VYTWGKGYCGALG GDE DKT P +L+++
Sbjct: 390 DSTGYVYTWGKGYCGALGHGDETDKTTPSHLTSL 423
Score = 56.6 bits (135), Expect(2) = 2e-06
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = -2
Query: 433 VFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQV 320
VFT GDNSS+CCGH + GR IF+P VEALK I KQV
Sbjct: 235 VFTCGDNSSFCCGHRDTGRPIFRPRMVEALKNIPVKQV 272
Score = 20.4 bits (41), Expect(2) = 2e-06
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 452 GAETTQCIHMGRQFF 408
G ETTQC+ R F
Sbjct: 196 GPETTQCVEFTRISF 210