BLASTX nr result

ID: Ephedra26_contig00018890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018890
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002088215.1| GE13692 [Drosophila yakuba] gi|194174316|gb|...    58   1e-06
ref|XP_001969986.1| GG25361, isoform A [Drosophila erecta] gi|19...    55   1e-05

>ref|XP_002088215.1| GE13692 [Drosophila yakuba] gi|194174316|gb|EDW87927.1| GE13692
           [Drosophila yakuba]
          Length = 876

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 42/130 (32%), Positives = 57/130 (43%)
 Frame = +1

Query: 10  TELKATTTCHTEWLKSSTKPQELRASTPCHTMWLRATTKAHTELRATTKCHTEWLKATTN 189
           T +  TTTC  E   ++T+  E+  +T C       TT+A  E+  TT C  E    TT 
Sbjct: 272 TLITTTTTCAPEITTTTTRAPEVTTTTTCAPEITTTTTRA-PEVTTTTTCVPEITTTTTC 330

Query: 190 PRTVLIMHLTTGLSVLKLGSNCHSELPAVTMRRPELRTTITCHREVIAATTCHREELFRA 369
              +     TT    +   + C  E+   T R PE+ TT TC  E+   TTC  E     
Sbjct: 331 APEITTT--TTCAPEITTTTTCAPEITTTTTRAPEVTTTTTCAPEITTTTTCAPE--ITT 386

Query: 370 *AICAWVLTT 399
              CA V+TT
Sbjct: 387 TTTCAPVITT 396



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/129 (31%), Positives = 56/129 (43%)
 Frame = +1

Query: 13  ELKATTTCHTEWLKSSTKPQELRASTPCHTMWLRATTKAHTELRATTKCHTEWLKATTNP 192
           E+  TTTC  E   ++T+  E+  +T C    +  TT    E+  TT C    +  TT  
Sbjct: 343 EITTTTTCAPEITTTTTRAPEVTTTTTCAPE-ITTTTTCAPEITTTTTCAP--VITTTTT 399

Query: 193 RTVLIMHLTTGLSVLKLGSNCHSELPAVTMRRPELRTTITCHREVIAATTCHREELFRA* 372
               I   TT    +   + C  E+   T R PE+ TT TC  E+   TTC  E      
Sbjct: 400 CAPEITTTTTCAPEITTTTTCAPEITTTTTRAPEVTTTTTCAPEITTTTTCAPE--ITTT 457

Query: 373 AICAWVLTT 399
             CA V+TT
Sbjct: 458 TTCAPVITT 466



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/129 (31%), Positives = 56/129 (43%)
 Frame = +1

Query: 13  ELKATTTCHTEWLKSSTKPQELRASTPCHTMWLRATTKAHTELRATTKCHTEWLKATTNP 192
           E+  TTTC  E   ++T+  E+  +T C    +  TT    E+  TT C    +  TT  
Sbjct: 536 EITTTTTCAPEITTTTTRAPEVTTTTTCAPE-ITTTTTCAPEITTTTTCAP--VITTTTT 592

Query: 193 RTVLIMHLTTGLSVLKLGSNCHSELPAVTMRRPELRTTITCHREVIAATTCHREELFRA* 372
               I   TT    +   + C  E+   T R PE+ TT TC  E+   TTC  E      
Sbjct: 593 CAPEITTTTTCAPEITTTTTCAPEITTTTTRAPEVTTTTTCAPEITTTTTCAPE--ITTT 650

Query: 373 AICAWVLTT 399
             CA V+TT
Sbjct: 651 TTCAPVITT 659


>ref|XP_001969986.1| GG25361, isoform A [Drosophila erecta] gi|190661853|gb|EDV59045.1|
           GG25361, isoform A [Drosophila erecta]
          Length = 635

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/114 (30%), Positives = 47/114 (41%)
 Frame = +1

Query: 13  ELKATTTCHTEWLKSSTKPQELRASTPCHTMWLRATTKAHTELRATTKCHTEWLKATTNP 192
           E+  TT C  E + ++T  QE+  +T C T      T+  T    TT   T     TT  
Sbjct: 363 EITTTTPCTPEIITTTTCTQEITTTTTCTTTTTTTCTQEITTTTTTTTTTTTTTTTTTCT 422

Query: 193 RTVLIMHLTTGLSVLKLGSNCHSELPAVTMRRPELRTTITCHREVIAATTCHRE 354
            T      TT    +   + C  E+   T   PE+ TT  C  E+I  TTC  E
Sbjct: 423 TTTTCSTTTTCTPEITTTTPCTPEIITTTTCTPEITTTTPCTPEIITTTTCTPE 476


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