BLASTX nr result

ID: Ephedra26_contig00018885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018885
         (776 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR36911.1| disease resistance gene [Pinus sylvestris]              87   5e-15
gb|ACN40182.1| unknown [Picea sitchensis]                              87   6e-15
gb|ABK26837.1| unknown [Picea sitchensis]                              87   6e-15
gb|ABK23435.1| unknown [Picea sitchensis] gi|116785787|gb|ABK238...    86   1e-14
gb|ABR17176.1| unknown [Picea sitchensis]                              75   3e-11

>gb|AAR36911.1| disease resistance gene [Pinus sylvestris]
          Length = 207

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
 Frame = -2

Query: 664 FMMKRGLLSKQRVLADVNMALRRSKMVGRSLAGTITYFLHGTTKCTXXXXXXXXXXSKRF 485
           FM+++GL+SK+++L D+++ + R K+ GRSL   + +   G                   
Sbjct: 24  FMIRKGLISKRKMLMDMHLMMERGKVYGRSLRNLVFHHSRGNNHGGFG-----------L 72

Query: 484 RDYEFSCSSSPDTHH-NHSPSWFLPSMVLHCMXXXXXXXXXXXXHEWSSRFSAFLQLDYN 308
           +DYEFSCS+SP   H       + P+ +LH               +       F QLDY+
Sbjct: 73  QDYEFSCSNSPAIFHMTKRKHHYFPTHILH----FPCIHPHQVEDKEEPSTPVFPQLDYS 128

Query: 307 GA-------DDHDHNASAPSDEWLTPHCXXXXXXXXXXXXAEEDEEDFHQHAGHVDKLAD 149
                    D +D          L+P C              ED+   HQ    VD+ AD
Sbjct: 129 NEYFSKDCLDQNDLPVLQKLSPLLSPLCRRISNSG-------EDQAYDHQ----VDRRAD 177

Query: 148 EFIAKFYDDIKLQRQSSILQYQEMLARG 65
           EFIAKFY+ ++LQ + S+LQYQEML RG
Sbjct: 178 EFIAKFYEQLRLQNRMSLLQYQEMLERG 205


>gb|ACN40182.1| unknown [Picea sitchensis]
          Length = 208

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
 Frame = -2

Query: 664 FMMKRGLLSKQRVLADVNMALRRSKMVGRSLAGTITYFLHGTTKCTXXXXXXXXXXSKRF 485
           FM+++GL+SK+++L D+++ + R K+ GRSL   + +   G                   
Sbjct: 24  FMIRKGLISKRKMLMDMHLMMERGKVYGRSLRNLVFHHSRGNNHGGFG-----------L 72

Query: 484 RDYEFSCSSSPDTHH-NHSPSWFLPSMVLHCMXXXXXXXXXXXXHEWSSRFSAFLQLDYN 308
           +DYEFSCS+SP   H       + P+ +LH               +     +   QLDY+
Sbjct: 73  QDYEFSCSNSPAIFHMTKRKHHYFPTHILH----FPCINQHQVEDKEEPSTTVLPQLDYS 128

Query: 307 GA-------DDHDHNASAPSDEWLTPHCXXXXXXXXXXXXAEEDEEDFHQHAGHVDKLAD 149
                    D +D  A       L+P C              ED++  HQ    VD+ A+
Sbjct: 129 NEYFSKDCLDQNDLPAIQKLSPLLSPLCRRISNSS------REDQDYGHQ----VDRQAE 178

Query: 148 EFIAKFYDDIKLQRQSSILQYQEMLARG 65
           EFIAKFY+ ++LQ + S+LQYQEML RG
Sbjct: 179 EFIAKFYEQLRLQNRMSLLQYQEMLDRG 206


>gb|ABK26837.1| unknown [Picea sitchensis]
          Length = 208

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
 Frame = -2

Query: 664 FMMKRGLLSKQRVLADVNMALRRSKMVGRSLAGTITYFLHGTTKCTXXXXXXXXXXSKRF 485
           FM+++GL+SK+++L D+++ + R K+ GRSL   + +   G                   
Sbjct: 24  FMIRKGLISKRKMLMDMHLMMERGKVYGRSLRNLVFHHSRGNNHGGFG-----------L 72

Query: 484 RDYEFSCSSSPDTHH-NHSPSWFLPSMVLHCMXXXXXXXXXXXXHEWSSRFSAFLQLDYN 308
           +DYEFSCS+SP   H       + P+ +LH               +     +   QLDY+
Sbjct: 73  QDYEFSCSNSPAIFHMTKRKHHYFPTHILH----FPCINQHQVEDKEEPSTTVLPQLDYS 128

Query: 307 GA-------DDHDHNASAPSDEWLTPHCXXXXXXXXXXXXAEEDEEDFHQHAGHVDKLAD 149
                    D +D  A       L+P C              ED++  HQ    VD+ A+
Sbjct: 129 NEYFSKDCLDQNDLPAIQKLSPLLSPLCRRISNSS------REDQDYGHQ----VDRQAE 178

Query: 148 EFIAKFYDDIKLQRQSSILQYQEMLARG 65
           EFIAKFY+ ++LQ + S+LQYQEML RG
Sbjct: 179 EFIAKFYEQLRLQNRMSLLQYQEMLDRG 206


>gb|ABK23435.1| unknown [Picea sitchensis] gi|116785787|gb|ABK23859.1| unknown
           [Picea sitchensis]
          Length = 208

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
 Frame = -2

Query: 664 FMMKRGLLSKQRVLADVNMALRRSKMVGRSLAGTITYFLHGTTKCTXXXXXXXXXXSKRF 485
           FM+++GL+SK+++L D++  + R K+ GRSL   + +   G                   
Sbjct: 24  FMIRKGLISKRKMLMDMHFMMERGKVYGRSLRNLVFHHSRGNNHGGFG-----------L 72

Query: 484 RDYEFSCSSSPDTHH-NHSPSWFLPSMVLHCMXXXXXXXXXXXXHEWSSRFSAFLQLDYN 308
           +DYEFSCS+SP   H       + P+ +LH               +     +   QLDY+
Sbjct: 73  QDYEFSCSNSPAIFHMTKRKHHYFPTHILH----FPCINQHQVEDKEEPSTTVLPQLDYS 128

Query: 307 GA-------DDHDHNASAPSDEWLTPHCXXXXXXXXXXXXAEEDEEDFHQHAGHVDKLAD 149
                    D +D  A       L+P C              ED++  HQ    VD+ A+
Sbjct: 129 NEYFSKDCLDQNDLPAIQKLSPLLSPLCRRISNSS------REDQDYGHQ----VDRQAE 178

Query: 148 EFIAKFYDDIKLQRQSSILQYQEMLARG 65
           EFIAKFY+ ++LQ + S+LQYQEML RG
Sbjct: 179 EFIAKFYEQLRLQNRMSLLQYQEMLDRG 206


>gb|ABR17176.1| unknown [Picea sitchensis]
          Length = 206

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
 Frame = -2

Query: 661 MMKRGLLSKQRVLADVNMALRRSKMVGRSLAGTITYFLHGTTKCTXXXXXXXXXXSKRFR 482
           ++++G + K++++ D+++ ++R K++  +L   + + LH   + +               
Sbjct: 26  LLRKGSVLKRKMMVDIHLMMKRGKVLLGNLL--LNHSLHSLGRSSMTGFG--------LH 75

Query: 481 DYEFSCSSSP--------DTHHNHSPSWFLPSMVLHCMXXXXXXXXXXXXHEWSSRFSAF 326
           DYEFSCS+SP          HH++ PS  L S +                    S +   
Sbjct: 76  DYEFSCSNSPAPLSFHMRSKHHSYFPSMALFSCIQPRALDEDLDNKSNSVVISQSEYFTK 135

Query: 325 LQLDYNGADDHDHNASAPSDEWLTPHCXXXXXXXXXXXXAEEDEEDFHQHAGH-VDKLAD 149
             +D +     D   S P    L+P C                EE +   A H VDK A+
Sbjct: 136 SNMDLSNLPVVD--GSRP----LSPFC-------------RSKEELYADQADHQVDKQAE 176

Query: 148 EFIAKFYDDIKLQRQSSILQYQEMLARGA 62
           EFI+KFYD I+LQRQ S+L+Y EMLARGA
Sbjct: 177 EFISKFYDQIRLQRQVSLLRYDEMLARGA 205


Top