BLASTX nr result

ID: Ephedra26_contig00018837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018837
         (2009 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]    62   5e-10
emb|CCI55295.1| PH01B001G05.18 [Phyllostachys edulis]                  46   2e-08
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    42   8e-07

>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
          Length = 1409

 Score = 62.0 bits (149), Expect(2) = 5e-10
 Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
 Frame = -1

Query: 1670 VDEDEGI*SYYRKIKETVGDVKGAGGTLTNLDICRKLVSSLPARFETKAAAYEEVNRVVT 1491
            VDE E I     +  + V  ++  G T    +   K++ SLP+++ TK  A +E   +  
Sbjct: 59   VDETETIVEMITRFIDIVNGLEALGKTYKESEKVMKILRSLPSKWHTKVTAIQEAKDLTK 118

Query: 1490 DPSPDELYGILQAYELQKFPNRTAG-----RNLVLKAQEFPEKKEDHTKVEDTRNDSEAE 1326
             P  +EL G L  YE+        G     +N+ LKA    +++ED   VE+ +   E  
Sbjct: 119  LPM-EELIGSLMTYEINLTKKLQEGEDKNKKNITLKAT--TKEEED---VEEEKPSDEDN 172

Query: 1325 ELALTARRVRNIYVKRRFRG-----------------------------ACFNCGIVSYT 1233
            +LAL  R++       RFR                               CF C    + 
Sbjct: 173  DLALITRKLNKFMRGERFRERKFTSRRDPSKKESLSHGDNEKWEEKRELTCFKCKKSGHI 232

Query: 1232 *DDCRKSPLFEQQEPRRSSCERRDKAYMVHESDIKL*EYRRNSYATTNYLFMTVHDQEKV 1053
              DC   PL++ +  RR       KA M   ++ +      N     N  FM + D ++V
Sbjct: 233  KYDC---PLYKSEAKRRMK-----KAMMATWNESEESSEEENEKEVANMCFMAIDDLDEV 284

Query: 1052 ADNYSSTN---TSEDIHKDAKQRLAITN 978
              N+S  N     E++++D  ++L++ N
Sbjct: 285  NSNFSDENMHDVFEELYEDF-EKLSLKN 311



 Score = 30.8 bits (68), Expect(2) = 5e-10
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 1843 KPPSFDGSHYLQWKFRMRLHLQSLGATVW 1757
            + P F G+ Y  WK RM  +LQS    VW
Sbjct: 17   RAPFFTGTDYPYWKTRMTWYLQSTNLDVW 45


>emb|CCI55295.1| PH01B001G05.18 [Phyllostachys edulis]
          Length = 729

 Score = 45.8 bits (107), Expect(2) = 2e-08
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = -2

Query: 1843 KPPSFDGSHYLQWKFRMRLHLQSLGATVWTATSTPY--PPNPDAAT-IDANNKDMDAIAI 1673
            K P FDGS+Y  WK RM ++L+++  ++W   +  Y  P NP A T  +A+N  +DA A+
Sbjct: 10   KAPLFDGSNYTYWKIRMLIYLKAVSPSIWKIVNEGYIMPLNPLAPTNQEAHNAHLDAQAM 69



 Score = 42.0 bits (97), Expect(2) = 2e-08
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
 Frame = -1

Query: 1640 YRKIKETVGDVKGAGGTLTNLDICRKLVSSLPARFETKAAAY---EEVNRVVTDPSPDEL 1470
            Y  +   V ++KG G  L ++DI RK++ +LP ++ET    +    E+ R+    +P  L
Sbjct: 85   YSGLNNIVNELKGLGTDLLDVDIVRKMLRALPDKYETLVTLFLNSPELPRM----TPTGL 140

Query: 1469 YGILQAYEL-----QKFPNRTAGRNLVLKAQEFPEKKEDHTKVEDTRNDSEAEELALTAR 1305
             G L   EL     ++    ++ +  +   +   E ++D    ED   DS+ EE AL  R
Sbjct: 141  LGNLITNELFKKDKEELLESSSSKKKITAFKAKAESRDD----EDEEEDSD-EEFALLVR 195

Query: 1304 RVRNIYVKR 1278
            R++  ++KR
Sbjct: 196  RMKK-FMKR 203


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 42.0 bits (97), Expect(2) = 8e-07
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 1852 TAKKPPSFDGSHYLQWKFRMRLHLQSLGATVW 1757
            +  +PP FDGS+Y  WK RM+++LQS+   +W
Sbjct: 1070 STSRPPYFDGSNYAYWKARMKIYLQSIDYNLW 1101



 Score = 40.0 bits (92), Expect(2) = 8e-07
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
 Frame = -1

Query: 1670 VDEDEGI*SYYRKIKETVGDVKGAGGTLTNLDICRKLVSSLPARFETKAAAYEEVNRVVT 1491
            +D +E I   + +    +  +KG G   T  +  RK++ SLP  +E K  A +E   +  
Sbjct: 1110 MDANETITDMFTRFTNIINALKGLGKVYTTFENVRKILRSLPKTWEAKVTAIQEAKDLTK 1169

Query: 1490 DPSPDELYGILQAYEL----QKFPNRTAGRNLVLKAQEFPEKKEDHTKVEDTRNDSEAEE 1323
             P  +EL G L  +E+             +++ LK        ED   +++       ++
Sbjct: 1170 LPL-EELIGSLMTHEIIMKEHLEDESKKKKSIALKTISLEVDPEDEDGLDE-------DD 1221

Query: 1322 LALTARRVRNIYVKRR 1275
            +A  +R+ +N ++KR+
Sbjct: 1222 IAYFSRKYKN-FIKRK 1236


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