BLASTX nr result
ID: Ephedra26_contig00018815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00018815
(425 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 188 6e-46
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 185 5e-45
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 184 8e-45
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 183 2e-44
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 182 3e-44
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 182 5e-44
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 179 4e-43
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 176 2e-42
gb|AFB73911.1| polyprotein [Citrus sinensis] 176 4e-42
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 174 1e-41
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 173 2e-41
gb|AFB73912.1| polyprotein [Citrus sinensis] 173 2e-41
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 171 7e-41
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 171 7e-41
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 170 2e-40
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 170 2e-40
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 170 2e-40
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 170 2e-40
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 170 2e-40
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 169 3e-40
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 188 bits (478), Expect = 6e-46
Identities = 89/124 (71%), Positives = 101/124 (81%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
KYFVSFIDD+SR+ W+Y +K+KSD FA FK FKA VE K IKC RTDNGGE+ S EF
Sbjct: 491 KYFVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEF 550
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D+FCK+ GI RQ TV TPQQNGVAERMNRTL+ER R ML AG+E+SFWAEAVNTACYL
Sbjct: 551 DDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYL 610
Query: 13 VNRS 2
VNR+
Sbjct: 611 VNRA 614
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 185 bits (470), Expect = 5e-45
Identities = 86/132 (65%), Positives = 104/132 (78%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P+L+ +YFVSFIDD+SR++W+Y +K+KSD F FK FKA +E + K IKCLRTDNG
Sbjct: 493 PELSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ GEF FCK+ GI RQ TV TPQQNGVAERMNRTL+ER R ML TAG+ +SFWAE
Sbjct: 553 GEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAE 612
Query: 37 AVNTACYLVNRS 2
AV TACY++NRS
Sbjct: 613 AVKTACYVINRS 624
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 184 bits (468), Expect = 8e-45
Identities = 85/132 (64%), Positives = 104/132 (78%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P+++ +YFVSFIDD+SR++W+Y +K+KSD F FK FKA +E + K IKCLRTDNG
Sbjct: 493 PEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETRKKIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ GEF FCK+ GI RQ TV TPQQNGVAERMNRTL+ER R ML TAG+ +SFWAE
Sbjct: 553 GEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAE 612
Query: 37 AVNTACYLVNRS 2
AV TACY++NRS
Sbjct: 613 AVKTACYVINRS 624
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 183 bits (464), Expect = 2e-44
Identities = 84/132 (63%), Positives = 103/132 (78%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P+++ +YFVSFIDD+SR++W+Y +K+KSD F FK FKA +E + K IKCLRTDNG
Sbjct: 493 PEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETEKKIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ GEF FCK+ GI RQ TV TPQQNGVAERMNRTL+ER R ML TAG+ +SFWAE
Sbjct: 553 GEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAE 612
Query: 37 AVNTACYLVNRS 2
A TACY++NRS
Sbjct: 613 AAKTACYVINRS 624
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 182 bits (463), Expect = 3e-44
Identities = 85/123 (69%), Positives = 101/123 (82%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
++FVS IDD+SR W+YM+K KS+AF FK +K L+ENQ K IK LRTDNG EFC EF
Sbjct: 490 RFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEF 549
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D FCK+ GIAR RTV TPQQNGVAERMN+TL+ERARCMLS AG+++ FWAEAV+TACYL
Sbjct: 550 DQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYL 609
Query: 13 VNR 5
+NR
Sbjct: 610 INR 612
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 182 bits (461), Expect = 5e-44
Identities = 85/132 (64%), Positives = 103/132 (78%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P+L+ +YFVSFIDD+SR++W+Y +K+KSD F FK FKA +E + K IKCLRTDNG
Sbjct: 493 PKLSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ GEF FCK+ GI RQ TV TPQQNGVAERMNRTL+ER R ML TA + +SFWAE
Sbjct: 553 GEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAE 612
Query: 37 AVNTACYLVNRS 2
AV TACY++NRS
Sbjct: 613 AVKTACYVINRS 624
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 179 bits (453), Expect = 4e-43
Identities = 83/132 (62%), Positives = 103/132 (78%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P+++ KYFVSFIDD+SR++W+Y +K+KS ++ FK FKA VE + K IKCLRTDNG
Sbjct: 493 PEVSIGGAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ G+F FCK+ GI RQ TV TPQQNGVAERMNRTL+ER R ML TAG+ +SFWAE
Sbjct: 553 GEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAE 612
Query: 37 AVNTACYLVNRS 2
A TACY++NRS
Sbjct: 613 AAKTACYVINRS 624
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 176 bits (447), Expect = 2e-42
Identities = 81/125 (64%), Positives = 99/125 (79%)
Frame = -2
Query: 376 KKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGE 197
K+YF+S IDD +RKVW+Y LK K + F F +K+LVENQ NK +KCLRTDNG EFC+
Sbjct: 516 KQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSR 575
Query: 196 FDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACY 17
FD++CKEHGI R RT TPQQNGVAERMNRT+ME+ RC+L+ +GVE+ FWAEA TA Y
Sbjct: 576 FDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAY 635
Query: 16 LVNRS 2
L+NRS
Sbjct: 636 LINRS 640
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 176 bits (445), Expect = 4e-42
Identities = 84/132 (63%), Positives = 98/132 (74%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P ++ KY V+FIDD+SR+ W+Y +K+KSD F FK +KA VE + K IKCLRTDNG
Sbjct: 493 PDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ GEF FCK+ GI RQ TV TPQQNGVAERMNRTL ER R ML TAG+ SFWAE
Sbjct: 553 GEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAE 612
Query: 37 AVNTACYLVNRS 2
A TACY+VNRS
Sbjct: 613 AAKTACYIVNRS 624
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 174 bits (441), Expect = 1e-41
Identities = 77/124 (62%), Positives = 95/124 (76%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y ++ IDD+SRKVW Y LK K D FA FK +K +E Q K +K LRTDNGGEFCS F
Sbjct: 505 RYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAF 564
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D++C++ GI R T+P TPQQNGVAERMNRT++ +ARCMLS A + + FWAEA NTACYL
Sbjct: 565 DDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYL 624
Query: 13 VNRS 2
+NRS
Sbjct: 625 INRS 628
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 173 bits (439), Expect = 2e-41
Identities = 76/124 (61%), Positives = 95/124 (76%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y ++ IDD+SRKVW Y LK K D FA FK +K ++E Q K +K LRTDN GEFCS F
Sbjct: 505 RYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAF 564
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D++C++ GI R T+P TPQQNGVAERMNRT++ +ARCMLS A + + FWAEA NTACYL
Sbjct: 565 DDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYL 624
Query: 13 VNRS 2
+NRS
Sbjct: 625 INRS 628
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 173 bits (439), Expect = 2e-41
Identities = 83/132 (62%), Positives = 97/132 (73%)
Frame = -2
Query: 397 PQLTSPYKKYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNG 218
P ++ KY V+FIDD+SR+ W+Y +K+KSD F FK +KA VE + K IKCLRTDNG
Sbjct: 493 PDISMGGAKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNG 552
Query: 217 GEFCSGEFDNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAE 38
GE+ EF FCK+ GI RQ TV TPQQNGVAERMNRTL ER R ML TAG+ SFWAE
Sbjct: 553 GEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAE 612
Query: 37 AVNTACYLVNRS 2
A TACY+VNRS
Sbjct: 613 AAKTACYIVNRS 624
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 171 bits (434), Expect = 7e-41
Identities = 79/124 (63%), Positives = 97/124 (78%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y+V+FIDDFSRKVW+Y LK K + F FK +K +VE + K +K LRTDNG EFC+ +F
Sbjct: 611 RYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDF 670
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D FC++ GI R RTV TPQQNGVAERMN+TL++RARCM AG+ + FWAEAVNTA YL
Sbjct: 671 DEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYL 730
Query: 13 VNRS 2
VNRS
Sbjct: 731 VNRS 734
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 171 bits (434), Expect = 7e-41
Identities = 79/124 (63%), Positives = 97/124 (78%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y+V+FIDDFSRKVW+Y LK K + F FK +K +VE + K +K LRTDNG EFC+ +F
Sbjct: 824 RYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDF 883
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D FC++ GI R RTV TPQQNGVAERMN+TL++RARCM AG+ + FWAEAVNTA YL
Sbjct: 884 DEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYL 943
Query: 13 VNRS 2
VNRS
Sbjct: 944 VNRS 947
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 170 bits (431), Expect = 2e-40
Identities = 80/124 (64%), Positives = 100/124 (80%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+YF+S IDD+SRKVWIY+LK K A FKV+K+LVENQ + +KCLRTDNG EFCS F
Sbjct: 502 RYFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVF 561
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
+ +C++HGI R +TV TPQQNG+AERMNRTL+++ RCML + + +SFWAEAVNTA YL
Sbjct: 562 EEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYL 621
Query: 13 VNRS 2
VNRS
Sbjct: 622 VNRS 625
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 170 bits (430), Expect = 2e-40
Identities = 78/124 (62%), Positives = 97/124 (78%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
KYF+S IDD +RKVW+Y L+ K + F F +K LVENQ+NK +KCLRTDNG EFC+ +F
Sbjct: 527 KYFLSIIDDKTRKVWLYFLRSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLEFCNLKF 586
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
D +CKEHGI R +T TPQQNGVAERMNRT+ME+ RCML+ +G+ + FWAEA TA YL
Sbjct: 587 DAYCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYL 646
Query: 13 VNRS 2
+NRS
Sbjct: 647 INRS 650
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 170 bits (430), Expect = 2e-40
Identities = 74/124 (59%), Positives = 95/124 (76%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y ++ IDD+SRKVW Y LK K D F FK +K ++E Q + +K LRTDNGGEFCS F
Sbjct: 504 RYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAF 563
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
+++C++ GI R T+P TPQQNGVAERMNRT++ RARCMLS A + + FWAEA +TACYL
Sbjct: 564 NDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYL 623
Query: 13 VNRS 2
+NRS
Sbjct: 624 INRS 627
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 170 bits (430), Expect = 2e-40
Identities = 74/124 (59%), Positives = 95/124 (76%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y ++ IDD+SRKVW Y LK K D F FK +K ++E Q + +K LRTDNGGEFCS F
Sbjct: 504 RYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAF 563
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
+++C++ GI R T+P TPQQNGVAERMNRT++ RARCMLS A + + FWAEA +TACYL
Sbjct: 564 NDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYL 623
Query: 13 VNRS 2
+NRS
Sbjct: 624 INRS 627
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 170 bits (430), Expect = 2e-40
Identities = 74/123 (60%), Positives = 93/123 (75%)
Frame = -2
Query: 370 YFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEFD 191
Y ++ IDD+SRKVW Y LK K D FA FK +K ++E Q K +K LRTDNGGEFCS FD
Sbjct: 503 YMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQAEKEVKVLRTDNGGEFCSDAFD 562
Query: 190 NFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYLV 11
++C++ GI R T+P TPQQN VAERMNRT++ +ARCMLS A + + +WAEA NT CYL+
Sbjct: 563 DYCRKEGIGRHHTIPYTPQQNSVAERMNRTIISKARCMLSNARMNKHYWAEAANTTCYLI 622
Query: 10 NRS 2
NRS
Sbjct: 623 NRS 625
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 169 bits (429), Expect = 3e-40
Identities = 74/124 (59%), Positives = 95/124 (76%)
Frame = -2
Query: 373 KYFVSFIDDFSRKVWIYMLKRKSDAFACFKVFKALVENQKNKSIKCLRTDNGGEFCSGEF 194
+Y ++ IDD+SRKVW Y LK K D F FK +K ++E Q + +K LRTDNGGEFCS F
Sbjct: 504 RYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAF 563
Query: 193 DNFCKEHGIARQRTVPRTPQQNGVAERMNRTLMERARCMLSTAGVEQSFWAEAVNTACYL 14
+++C++ GI R T+P TPQQNGVAERMNRT++ RARCMLS A + + FWAEA +TACYL
Sbjct: 564 NDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYL 623
Query: 13 VNRS 2
+NRS
Sbjct: 624 INRS 627