BLASTX nr result

ID: Ephedra26_contig00018807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018807
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006826913.1| hypothetical protein AMTR_s00010p00163740 [A...    58   2e-08
gb|ADE77937.1| unknown [Picea sitchensis]                              53   3e-08
ref|XP_004288352.1| PREDICTED: THO complex subunit 4-like [Fraga...    50   8e-07
gb|EMJ16974.1| hypothetical protein PRUPE_ppa009623mg [Prunus pe...    48   4e-06

>ref|XP_006826913.1| hypothetical protein AMTR_s00010p00163740 [Amborella trichopoda]
           gi|548831342|gb|ERM94150.1| hypothetical protein
           AMTR_s00010p00163740 [Amborella trichopoda]
          Length = 269

 Score = 57.8 bits (138), Expect(2) = 2e-08
 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +3

Query: 210 SFNRTKGHIWQSYLLEESLIEMGAGGV-GRAKLYIFNLDYGVSNQDIKEVY 359
           SF+RTK  IWQ  + E+S+I  G  G+    KLYI NLDYGVSN+DI+E++
Sbjct: 64  SFSRTKDMIWQHDMFEDSMIAAGLTGIESGTKLYISNLDYGVSNEDIRELF 114



 Score = 26.6 bits (57), Expect(2) = 2e-08
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 448 ELFLRVGELKISSVHCDRNARSN 516
           ELF  +G +K  +VH DR+ RS+
Sbjct: 112 ELFSEIGPIKRCAVHYDRSGRSS 134


>gb|ADE77937.1| unknown [Picea sitchensis]
          Length = 274

 Score = 53.1 bits (126), Expect(2) = 3e-08
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +3

Query: 210 SFNRTKGHIWQSYLLEESLIEMGA--GGVGRAKLYIFNLDYGVSNQDIKEVY 359
           SFNR KG +WQ  + E+S+  +G   G     KLY+ NLD GVSNQDIKE++
Sbjct: 71  SFNRAKGVVWQHDMFEDSMAAIGMPIGLETGTKLYVSNLDSGVSNQDIKELF 122



 Score = 30.4 bits (67), Expect(2) = 3e-08
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 448 ELFLRVGELKISSVHCDRNARSN 516
           ELF  VG+LK  ++H DR+ RSN
Sbjct: 120 ELFTEVGDLKSCALHYDRSGRSN 142


>ref|XP_004288352.1| PREDICTED: THO complex subunit 4-like [Fragaria vesca subsp. vesca]
          Length = 283

 Score = 50.4 bits (119), Expect(2) = 8e-07
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 210 SFNRTKGHIWQSYLLEESLIEMGAGGVG-RAKLYIFNLDYGVSNQDIKEVY 359
           SF RTK   WQ  L EESL   G  G+    KLY+ NL YGV+N+DI+E++
Sbjct: 70  SFRRTKHFPWQPDLFEESLRAAGISGIEIGTKLYVSNLHYGVTNEDIRELF 120



 Score = 28.1 bits (61), Expect(2) = 8e-07
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 448 ELFLRVGELKISSVHCDRNAR 510
           ELF  +GELK  +VH D+N R
Sbjct: 118 ELFSEIGELKRYAVHFDKNGR 138


>gb|EMJ16974.1| hypothetical protein PRUPE_ppa009623mg [Prunus persica]
          Length = 284

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 210 SFNRTKGHIWQSYLLEESLIEMGAGGVG-RAKLYIFNLDYGVSNQDIKEVY 359
           S  RTK   WQ  L E+S+   G  G+    KLY+ NLDYGV+N+DI+E++
Sbjct: 77  STRRTKRFPWQPDLFEDSIRAAGISGIEIGTKLYVSNLDYGVTNEDIRELF 127



 Score = 28.1 bits (61), Expect(2) = 4e-06
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 448 ELFLRVGELKISSVHCDRNAR 510
           ELF  +GELK  +VH D+N R
Sbjct: 125 ELFSEIGELKRYAVHFDKNGR 145


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