BLASTX nr result

ID: Ephedra26_contig00018640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018640
         (575 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472030.1| PREDICTED: uncharacterized protein LOC102622...    59   1e-06
ref|XP_006433340.1| hypothetical protein CICLE_v10000263mg [Citr...    59   1e-06
ref|XP_002319018.2| hypothetical protein POPTR_0013s02330g [Popu...    56   8e-06
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...    55   1e-05

>ref|XP_006472030.1| PREDICTED: uncharacterized protein LOC102622039 isoform X1 [Citrus
           sinensis]
          Length = 852

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
 Frame = +2

Query: 242 SRNNEQQRDGFNEAKIDTKTTPPQGEAGNDSEKKEN--------DGP--TMVESKEAVAL 391
           S+  +QQ+       ++T     QG+    SE  EN          P    VE KE+V  
Sbjct: 97  SKQQQQQQQQLTHETLETVGAQKQGDPEIVSEVSENPEVVSGSQQNPENVSVEKKESVRK 156

Query: 392 SMRTRNNEILHPWPEWIDLMERLAKQNYFQFKPTDVPLDTRMIKSI 529
            +     E++HPWPEWI+ MERL KQNYF  +  D   + +M+K +
Sbjct: 157 EV-----ELVHPWPEWIEFMERLVKQNYFDHRRKD---EVKMVKDL 194


>ref|XP_006433340.1| hypothetical protein CICLE_v10000263mg [Citrus clementina]
           gi|568835986|ref|XP_006472031.1| PREDICTED:
           uncharacterized protein LOC102622039 isoform X2 [Citrus
           sinensis] gi|557535462|gb|ESR46580.1| hypothetical
           protein CICLE_v10000263mg [Citrus clementina]
          Length = 846

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
 Frame = +2

Query: 242 SRNNEQQRDGFNEAKIDTKTTPPQGEAGNDSEKKEN--------DGP--TMVESKEAVAL 391
           S+  +QQ+       ++T     QG+    SE  EN          P    VE KE+V  
Sbjct: 97  SKQQQQQQQQLTHETLETVGAQKQGDPEIVSEVSENPEVVSGSQQNPENVSVEKKESVRK 156

Query: 392 SMRTRNNEILHPWPEWIDLMERLAKQNYFQFKPTDVPLDTRMIKSI 529
            +     E++HPWPEWI+ MERL KQNYF  +  D   + +M+K +
Sbjct: 157 EV-----ELVHPWPEWIEFMERLVKQNYFDHRRKD---EVKMVKDL 194


>ref|XP_002319018.2| hypothetical protein POPTR_0013s02330g [Populus trichocarpa]
           gi|550324756|gb|EEE94941.2| hypothetical protein
           POPTR_0013s02330g [Populus trichocarpa]
          Length = 960

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 21/47 (44%), Positives = 34/47 (72%)
 Frame = +2

Query: 347 NDGPTMVESKEAVALSMRTRNNEILHPWPEWIDLMERLAKQNYFQFK 487
           +DG + V+ +E   + ++ +  E++HPWPEWI+LMERL +QNYF  +
Sbjct: 135 DDGDSSVDLEEPDMIELKRKEVELVHPWPEWIELMERLVQQNYFDHR 181


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = +2

Query: 368  ESKEAVALSMRTRNNEILHPWPEWIDLMERLAKQNYFQFKPTD 496
            E+ ++V LS +    E++HPWPEWI+LMERL +QNYF  +  D
Sbjct: 1336 EANDSVELSKKKSEVEVVHPWPEWIELMERLVQQNYFDHRRKD 1378


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