BLASTX nr result

ID: Ephedra26_contig00018513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018513
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006625663.1| PREDICTED: neurofilament medium polypeptide-...    56   8e-06

>ref|XP_006625663.1| PREDICTED: neurofilament medium polypeptide-like [Lepisosteus
           oculatus]
          Length = 812

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
 Frame = +3

Query: 81  VEETKIEDDSGEGNDLSRSVFQTAAEVISERIAEFNNGGQQINHQEIDMLNQQEAEKVEE 260
           +EETK+ED+  E +D   +V +  A  + E         ++   +E+    + E E  EE
Sbjct: 447 IEETKVEDEKAEMDDALAAVAEELAADLGEAEEAEEAAAEEEEEEEVKEEGEAEGEAAEE 506

Query: 261 NIIAFSK-EASHCKEDKKSEESVCAETENVKSEQDAGNKGIE-NTEADHLE-KKGEETRS 431
            ++A SK E S    +++  E    E E  ++E+    +G E   E +  E K+GEE   
Sbjct: 507 EVVAASKAEVSAAAPEEEEAEEEGEEKEGEEAEEGEAEEGKEAEEEGEEAEAKEGEEEEG 566

Query: 432 EGDAKNVEVSADKDNIDCESNTQGLAGDFITESKPSENPE 551
           E +A+  + +   +  + E   +G      ++ +P +  E
Sbjct: 567 EAEAEEEKEAEAAEGEEAEQAEEGAESPQASKPEPEKEEE 606


Top