BLASTX nr result
ID: Ephedra26_contig00018478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00018478
(708 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001777721.1| predicted protein [Physcomitrella patens] gi... 64 5e-08
gb|ABK25455.1| unknown [Picea sitchensis] 62 2e-07
ref|XP_002963662.1| hypothetical protein SELMODRAFT_80248 [Selag... 62 2e-07
ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [A... 61 3e-07
ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-li... 60 5e-07
ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-li... 60 5e-07
gb|EPS67744.1| hypothetical protein M569_07025, partial [Genlise... 60 5e-07
ref|XP_002974750.1| hypothetical protein SELMODRAFT_101808 [Sela... 60 5e-07
ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutr... 60 7e-07
ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Caps... 60 7e-07
ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-li... 60 7e-07
dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila] 60 7e-07
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ... 60 7e-07
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 60 7e-07
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li... 58 3e-06
ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-li... 58 3e-06
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li... 58 3e-06
gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus... 58 3e-06
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li... 57 4e-06
ref|XP_002449727.1| hypothetical protein SORBIDRAFT_05g022200 [S... 57 4e-06
>ref|XP_001777721.1| predicted protein [Physcomitrella patens]
gi|162670941|gb|EDQ57501.1| predicted protein
[Physcomitrella patens]
Length = 850
Score = 63.9 bits (154), Expect = 5e-08
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +3
Query: 120 SGKKSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLT 299
S +K+VLIMDEVDG SGGDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 409 SERKAVLIMDEVDGMSGGDRGGVADLILSIKSSHIPIICICNDKYSQKLKSLINYCLPLP 468
Query: 300 SNMLTSNHI*RMMEKM 347
T + + ++++
Sbjct: 469 FRKPTKQQMAKRLQQI 484
>gb|ABK25455.1| unknown [Picea sitchensis]
Length = 550
Score = 62.0 bits (149), Expect = 2e-07
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
KSVLIMDEVDG SGGDRGG+ D D Y+Q+LK L NYCLPL
Sbjct: 137 KSVLIMDEVDGMSGGDRGGVSDLIASIKISKIPIICICNDRYNQKLKSLVNYCLPL 192
>ref|XP_002963662.1| hypothetical protein SELMODRAFT_80248 [Selaginella moellendorffii]
gi|300168930|gb|EFJ35533.1| hypothetical protein
SELMODRAFT_80248 [Selaginella moellendorffii]
Length = 465
Score = 61.6 bits (148), Expect = 2e-07
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Frame = +3
Query: 120 SGKKSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLT 299
+GK+SVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L+
Sbjct: 42 AGKQSVLIMDEVDGMSAGDRGGVADLIASIKISKVPIICICNDRYSQKLKSLVNYCLLLS 101
Query: 300 SNMLTSNHI*RMM------EKMKI*HLLPQQTSKMT 389
T + + + EK+ I + ++ S+ T
Sbjct: 102 YRKPTKQQMAKRLQDIARSEKLNIDTIALEELSERT 137
>ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [Amborella trichopoda]
gi|548830733|gb|ERM93656.1| hypothetical protein
AMTR_s00004p00160120 [Amborella trichopoda]
Length = 725
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/56 (55%), Positives = 33/56 (58%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
KSVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 495 KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPL 550
>ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Solanum
tuberosum]
Length = 992
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3
Query: 126 KKSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLTSN 305
+K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLP+
Sbjct: 499 QKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPIVFR 558
Query: 306 MLTSNHI*RMMEKM 347
T + + ++++
Sbjct: 559 KPTKQQMAKRLKQV 572
>ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Solanum
tuberosum]
Length = 993
Score = 60.5 bits (145), Expect = 5e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3
Query: 126 KKSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLTSN 305
+K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLP+
Sbjct: 499 QKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPIVFR 558
Query: 306 MLTSNHI*RMMEKM 347
T + + ++++
Sbjct: 559 KPTKQQMAKRLKQV 572
>gb|EPS67744.1| hypothetical protein M569_07025, partial [Genlisea aurea]
Length = 888
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 96 ALCFNILNSGK-KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKI 272
AL N+ S K+VLIMDEVDG SGGDRGG+ D D YSQ+LK
Sbjct: 452 ALSLNMERSDHPKTVLIMDEVDGMSGGDRGGVADLIASIKISKIPIICICNDRYSQKLKS 511
Query: 273 LTNYCLPLTSNMLTSNHI*RMMEKM 347
L NYCL L T I + + ++
Sbjct: 512 LVNYCLLLNYRKPTKQQIAKRLSQI 536
>ref|XP_002974750.1| hypothetical protein SELMODRAFT_101808 [Selaginella moellendorffii]
gi|300157645|gb|EFJ24270.1| hypothetical protein
SELMODRAFT_101808 [Selaginella moellendorffii]
Length = 468
Score = 60.5 bits (145), Expect = 5e-07
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 117 NSGKKSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
N K+SVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L
Sbjct: 44 NKQKQSVLIMDEVDGMSAGDRGGVADLIASIKTSKVPIICICNDRYSQKLKSLVNYCLLL 103
Query: 297 TSNMLTSNHI*RMM------EKMKI*HLLPQQTSKMT 389
+ T + + + EK+ I + ++ S+ T
Sbjct: 104 SYRKPTKQQMAKRLQDIARSEKLNIDTIALEELSERT 140
>ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
gi|557101796|gb|ESQ42159.1| hypothetical protein
EUTSA_v10012587mg [Eutrema salsugineum]
Length = 962
Score = 60.1 bits (144), Expect = 7e-07
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 475 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPL 530
>ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Capsella rubella]
gi|482555714|gb|EOA19906.1| hypothetical protein
CARUB_v10000156mg [Capsella rubella]
Length = 953
Score = 60.1 bits (144), Expect = 7e-07
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 466 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPL 521
>ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-like [Solanum
lycopersicum]
Length = 1012
Score = 60.1 bits (144), Expect = 7e-07
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = +3
Query: 126 KKSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLTSN 305
+K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLP+
Sbjct: 519 QKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPIVFR 578
Query: 306 MLTSNHI*RMMEKM 347
T + + + ++
Sbjct: 579 KPTKQQMAKRLNQV 592
>dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila]
Length = 933
Score = 60.1 bits (144), Expect = 7e-07
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 446 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPL 501
>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319877|gb|EFH50299.1| AAA-type ATPase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 960
Score = 60.1 bits (144), Expect = 7e-07
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 473 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPL 528
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 60.1 bits (144), Expect = 7e-07
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPL 296
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCLPL
Sbjct: 469 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPL 524
>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
max]
Length = 947
Score = 57.8 bits (138), Expect = 3e-06
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLT 299
KSVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L+
Sbjct: 460 KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLS 516
>ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Glycine
max]
Length = 949
Score = 57.8 bits (138), Expect = 3e-06
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLT 299
KSVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L+
Sbjct: 462 KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLS 518
>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 938
Score = 57.8 bits (138), Expect = 3e-06
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLT 299
KSVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L+
Sbjct: 452 KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLS 508
>gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
Length = 938
Score = 57.8 bits (138), Expect = 3e-06
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLT 299
KSVLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L+
Sbjct: 455 KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLS 511
>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
Length = 989
Score = 57.4 bits (137), Expect = 4e-06
Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLTSNM 308
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L
Sbjct: 502 KAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLMLNFRK 561
Query: 309 LTSNHI-*RMMEKMK 350
T + R+ME K
Sbjct: 562 PTKQQMSKRLMEIAK 576
>ref|XP_002449727.1| hypothetical protein SORBIDRAFT_05g022200 [Sorghum bicolor]
gi|241935570|gb|EES08715.1| hypothetical protein
SORBIDRAFT_05g022200 [Sorghum bicolor]
Length = 946
Score = 57.4 bits (137), Expect = 4e-06
Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 129 KSVLIMDEVDGTSGGDRGGILDXXXXXXXXXXXXXXXXXDHYSQELKILTNYCLPLTSNM 308
K+VLIMDEVDG S GDRGG+ D D YSQ+LK L NYCL L
Sbjct: 460 KAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLMLNFRK 519
Query: 309 LTSNHI-*RMMEKMK 350
T + R+ME K
Sbjct: 520 PTKQQMGKRLMEIAK 534