BLASTX nr result
ID: Ephedra26_contig00018441
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00018441
(516 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22212.1| unknown [Picea sitchensis] 97 3e-18
ref|XP_006836395.1| hypothetical protein AMTR_s00092p00137780 [A... 91 2e-16
ref|XP_002966456.1| hypothetical protein SELMODRAFT_407397 [Sela... 87 2e-15
ref|XP_002982065.1| hypothetical protein SELMODRAFT_115712 [Sela... 87 2e-15
ref|XP_006647179.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RN... 87 3e-15
ref|XP_004954802.1| PREDICTED: ribosomal RNA small subunit methy... 86 7e-15
ref|XP_002454545.1| hypothetical protein SORBIDRAFT_04g033060 [S... 86 7e-15
ref|XP_002451973.1| hypothetical protein SORBIDRAFT_04g011280 [S... 86 7e-15
ref|XP_003572662.1| PREDICTED: ribosomal RNA small subunit methy... 85 9e-15
ref|XP_003572661.1| PREDICTED: ribosomal RNA small subunit methy... 85 9e-15
ref|XP_003572660.1| PREDICTED: ribosomal RNA small subunit methy... 85 9e-15
gb|EMT17450.1| hypothetical protein F775_26793 [Aegilops tauschii] 85 1e-14
gb|EMS59766.1| hypothetical protein TRIUR3_35107 [Triticum urartu] 85 1e-14
gb|AFW72618.1| hypothetical protein ZEAMMB73_890502 [Zea mays] 85 1e-14
dbj|BAK00952.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 1e-14
ref|NP_001148942.1| ribosome biogenesis protein NEP1 [Zea mays] ... 85 1e-14
ref|XP_002307982.2| nucleolar essential family protein [Populus ... 84 2e-14
gb|EMS65995.1| hypothetical protein TRIUR3_34030 [Triticum urartu] 83 3e-14
ref|NP_001046590.1| Os02g0290400 [Oryza sativa Japonica Group] g... 83 3e-14
ref|XP_002322624.2| hypothetical protein POPTR_0016s03700g [Popu... 82 7e-14
>gb|ABK22212.1| unknown [Picea sitchensis]
Length = 250
Score = 96.7 bits (239), Expect = 3e-18
Identities = 42/55 (76%), Positives = 51/55 (92%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKIV 352
++D P+VFVVGAM+HGKI DY++DF+SIS+YPLSAACCIGRICNAVEQKWKI+
Sbjct: 196 SSDKIPLVFVVGAMAHGKINADYIDDFISISEYPLSAACCIGRICNAVEQKWKIL 250
>ref|XP_006836395.1| hypothetical protein AMTR_s00092p00137780 [Amborella trichopoda]
gi|548838913|gb|ERM99248.1| hypothetical protein
AMTR_s00092p00137780 [Amborella trichopoda]
Length = 272
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKIV 352
A DD +VFVVGAM+HGKI DY++DF+S+S+YPLSAACCIGRICN VE+KW I+
Sbjct: 218 AKDDVNLVFVVGAMAHGKITADYIDDFISVSEYPLSAACCIGRICNVVERKWNIL 272
>ref|XP_002966456.1| hypothetical protein SELMODRAFT_407397 [Selaginella moellendorffii]
gi|300165876|gb|EFJ32483.1| hypothetical protein
SELMODRAFT_407397 [Selaginella moellendorffii]
Length = 229
Score = 87.0 bits (214), Expect = 2e-15
Identities = 35/52 (67%), Positives = 48/52 (92%)
Frame = -1
Query: 507 DKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKIV 352
++ +VFVVGAM+HGKIE DY++D +++S+YPLSAACCIGRICNA+EQ W+I+
Sbjct: 178 EETLVFVVGAMAHGKIEADYIDDLVAVSEYPLSAACCIGRICNALEQHWQII 229
>ref|XP_002982065.1| hypothetical protein SELMODRAFT_115712 [Selaginella moellendorffii]
gi|300150081|gb|EFJ16733.1| hypothetical protein
SELMODRAFT_115712 [Selaginella moellendorffii]
Length = 188
Score = 87.0 bits (214), Expect = 2e-15
Identities = 35/52 (67%), Positives = 48/52 (92%)
Frame = -1
Query: 507 DKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKIV 352
++ +VFVVGAM+HGKIE DY++D +++S+YPLSAACCIGRICNA+EQ W+I+
Sbjct: 137 EETLVFVVGAMAHGKIEADYIDDLVAVSEYPLSAACCIGRICNALEQHWQII 188
>ref|XP_006647179.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA small subunit
methyltransferase NEP1-like [Oryza brachyantha]
Length = 284
Score = 86.7 bits (213), Expect = 3e-15
Identities = 35/54 (64%), Positives = 48/54 (88%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKWKI
Sbjct: 230 SSDDEPLVFVVGAMAHGKIDKEYSDDYIQICNYPLSAACCLNRICSALEQKWKI 283
>ref|XP_004954802.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
[Setaria italica]
Length = 302
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/54 (62%), Positives = 47/54 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKW I
Sbjct: 248 SSDDEPLVFVVGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNI 301
>ref|XP_002454545.1| hypothetical protein SORBIDRAFT_04g033060 [Sorghum bicolor]
gi|241934376|gb|EES07521.1| hypothetical protein
SORBIDRAFT_04g033060 [Sorghum bicolor]
Length = 280
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/54 (62%), Positives = 47/54 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKW I
Sbjct: 226 SSDDEPLVFVVGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNI 279
>ref|XP_002451973.1| hypothetical protein SORBIDRAFT_04g011280 [Sorghum bicolor]
gi|241931804|gb|EES04949.1| hypothetical protein
SORBIDRAFT_04g011280 [Sorghum bicolor]
Length = 285
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/54 (62%), Positives = 47/54 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKW I
Sbjct: 231 SSDDEPLVFVVGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNI 284
>ref|XP_003572662.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1-like
isoform 3 [Brachypodium distachyon]
Length = 280
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKIE DY +D++ IS YPLSAACC+ RI +A+EQKW I
Sbjct: 226 SSDDEPLVFVVGAMAHGKIENDYSDDYIQISSYPLSAACCLNRISSALEQKWNI 279
>ref|XP_003572661.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1-like
isoform 2 [Brachypodium distachyon]
Length = 277
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKIE DY +D++ IS YPLSAACC+ RI +A+EQKW I
Sbjct: 223 SSDDEPLVFVVGAMAHGKIENDYSDDYIQISSYPLSAACCLNRISSALEQKWNI 276
>ref|XP_003572660.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1-like
isoform 1 [Brachypodium distachyon]
Length = 275
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+P+VFVVGAM+HGKIE DY +D++ IS YPLSAACC+ RI +A+EQKW I
Sbjct: 221 SSDDEPLVFVVGAMAHGKIENDYSDDYIQISSYPLSAACCLNRISSALEQKWNI 274
>gb|EMT17450.1| hypothetical protein F775_26793 [Aegilops tauschii]
Length = 280
Score = 84.7 bits (208), Expect = 1e-14
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -1
Query: 510 DDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
DD+P+VFVVGAM+HGK++ +Y +D++ IS YPLSAACC+ RIC+A+EQKW I
Sbjct: 228 DDEPLVFVVGAMAHGKVDKEYSDDYIQISGYPLSAACCLNRICSALEQKWNI 279
>gb|EMS59766.1| hypothetical protein TRIUR3_35107 [Triticum urartu]
Length = 280
Score = 84.7 bits (208), Expect = 1e-14
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -1
Query: 510 DDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
DD+P+VFVVGAM+HGK++ +Y +D++ IS YPLSAACC+ RIC+A+EQKW I
Sbjct: 228 DDEPLVFVVGAMAHGKVDKEYSDDYIQISGYPLSAACCLNRICSALEQKWNI 279
>gb|AFW72618.1| hypothetical protein ZEAMMB73_890502 [Zea mays]
Length = 269
Score = 84.7 bits (208), Expect = 1e-14
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = -1
Query: 510 DDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
DD+P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKW I
Sbjct: 217 DDEPLVFVVGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNI 268
>dbj|BAK00952.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 84.7 bits (208), Expect = 1e-14
Identities = 34/52 (65%), Positives = 46/52 (88%)
Frame = -1
Query: 510 DDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
DD+P+VFVVGAM+HGK++ +Y +D++ IS YPLSAACC+ RIC+A+EQKW I
Sbjct: 227 DDEPLVFVVGAMAHGKVDKEYSDDYIQISGYPLSAACCLNRICSALEQKWSI 278
>ref|NP_001148942.1| ribosome biogenesis protein NEP1 [Zea mays]
gi|195623488|gb|ACG33574.1| ribosome biogenesis protein
NEP1 [Zea mays] gi|224033677|gb|ACN35914.1| unknown [Zea
mays] gi|413938066|gb|AFW72617.1| Ribosome biogenesis
protein NEP1 [Zea mays]
Length = 286
Score = 84.7 bits (208), Expect = 1e-14
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = -1
Query: 510 DDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
DD+P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKW I
Sbjct: 234 DDEPLVFVVGAMAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNI 285
>ref|XP_002307982.2| nucleolar essential family protein [Populus trichocarpa]
gi|550335410|gb|EEE91505.2| nucleolar essential family
protein [Populus trichocarpa]
Length = 284
Score = 84.3 bits (207), Expect = 2e-14
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = -1
Query: 510 DDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKIV 352
DD +VFVVGAMSHGKIE DYV+DF+S+S+YPLSAA CI R+C AV +KW+++
Sbjct: 232 DDTDLVFVVGAMSHGKIECDYVDDFISVSEYPLSAAWCIARVCEAVSKKWRVL 284
>gb|EMS65995.1| hypothetical protein TRIUR3_34030 [Triticum urartu]
Length = 276
Score = 83.2 bits (204), Expect = 3e-14
Identities = 34/54 (62%), Positives = 46/54 (85%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD+ +VFVVGAM+HGKI+ Y +D++ IS YPLSAACC+G+IC A+EQKW I
Sbjct: 222 SSDDEALVFVVGAMAHGKIDSAYTDDYIQISSYPLSAACCLGKICTALEQKWDI 275
>ref|NP_001046590.1| Os02g0290400 [Oryza sativa Japonica Group]
gi|47847950|dbj|BAD21740.1| putative nucleolar essential
protein [Oryza sativa Japonica Group]
gi|47847958|dbj|BAD21747.1| putative nucleolar essential
protein [Oryza sativa Japonica Group]
gi|113536121|dbj|BAF08504.1| Os02g0290400 [Oryza sativa
Japonica Group] gi|215678829|dbj|BAG95266.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218190517|gb|EEC72944.1| hypothetical protein
OsI_06808 [Oryza sativa Indica Group]
gi|222622635|gb|EEE56767.1| hypothetical protein
OsJ_06314 [Oryza sativa Japonica Group]
Length = 284
Score = 83.2 bits (204), Expect = 3e-14
Identities = 34/54 (62%), Positives = 46/54 (85%)
Frame = -1
Query: 516 AADDKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKI 355
++DD P+VFVVGAM+HGKI+ +Y +D++ I YPLSAACC+ RIC+A+EQKW I
Sbjct: 230 SSDDVPLVFVVGAMAHGKIDNEYSDDYIQICNYPLSAACCLNRICSALEQKWNI 283
>ref|XP_002322624.2| hypothetical protein POPTR_0016s03700g [Populus trichocarpa]
gi|550320753|gb|EEF04385.2| hypothetical protein
POPTR_0016s03700g [Populus trichocarpa]
Length = 282
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/52 (67%), Positives = 45/52 (86%)
Frame = -1
Query: 507 DKPIVFVVGAMSHGKIEPDYVEDFMSISKYPLSAACCIGRICNAVEQKWKIV 352
D +VFVVGAMSHGKIE DY++DF+S+S+YPLSAA CI RIC AV +KW+++
Sbjct: 231 DTDLVFVVGAMSHGKIECDYIDDFISVSEYPLSAAWCIARICEAVSKKWRVL 282