BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018357
         (962 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828392.1| hypothetical protein AMTR_s00060p00030440 [A...    63   2e-07
ref|XP_001771338.1| predicted protein [Physcomitrella patens] gi...    62   4e-07

>ref|XP_006828392.1| hypothetical protein AMTR_s00060p00030440 [Amborella trichopoda]
            gi|548833140|gb|ERM95808.1| hypothetical protein
            AMTR_s00060p00030440 [Amborella trichopoda]
          Length = 2492

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
 Frame = +3

Query: 6    SNRSNNYNSLASTNLKAPKSKSVSRNVRPGGIVSSNDNTGLAQVAIPVVASGSQPLRGSR 185
            + R N YN++      +  S  V+ N       S +  T     +     S  Q + G+ 
Sbjct: 2353 TGRPNAYNTIGGKPQNSKNSPRVNANTSEASGTSMSITTSSNSCSS---GSSQQAIHGNH 2409

Query: 186  TVGSQLHSQSNVQQAGSNQYPHHPIGYTEQRASSHQPAGQKSGGSHDWSGHQHRKGSQGR 365
                Q+      QQ    Q   HPIGY+EQR     P  QK G +++W   Q R G QGR
Sbjct: 2410 GGSGQVFKPQTSQQG---QGYLHPIGYSEQRGGG--PGQQKVGSTNEWQ-QQRRGGFQGR 2463

Query: 366  THIPGEKNF-PVKVKQIYVAKP 428
            +   GEK++ P K+KQIYVAKP
Sbjct: 2464 SQ--GEKSYAPSKMKQIYVAKP 2483


>ref|XP_001771338.1| predicted protein [Physcomitrella patens]
           gi|162677427|gb|EDQ63898.1| predicted protein
           [Physcomitrella patens]
          Length = 263

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
 Frame = +3

Query: 6   SNRSNNYNSLASTNLKAPKSKSVSRNVRPGGIVSSND--NTGLAQVAIPVVASGSQPLRG 179
           +N++ + +S A +N K   ++  SR  R G ++S+ +  NTG   + + V + G      
Sbjct: 81  NNQATSMSSSAQSNAKFRSNRRSSRVTRGGNLMSTGNGTNTGSVNLGMGVNSGG---YNN 137

Query: 180 SRTVGSQLHSQSNVQQAGSNQYP----------HHPIGYTEQRASSHQPAGQKSGGSHDW 329
           + T G ++       Q   + YP          HH I +++QR  S Q + +   GS +W
Sbjct: 138 AGTNGGRVPQNHLQPQPPHHLYPAMGGVGQPHAHHTINHSDQRGPSQQNSPRV--GSSNW 195

Query: 330 SGHQ-HRKG--SQGRTHI-----PGEKNF--PVKVKQIYVAKP 428
           SG Q HRKG  +QGR         GEK F  P K+KQ+YVAKP
Sbjct: 196 SGSQGHRKGVGNQGRPPAGERGSTGEKMFAPPSKLKQVYVAKP 238