BLASTX nr result
ID: Ephedra26_contig00018315
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00018315
(1097 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 80 6e-49
gb|ABA93730.1| retrotransposon protein, putative, unclassified [... 87 6e-49
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 85 1e-47
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 85 2e-47
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 84 4e-47
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 84 4e-47
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 81 4e-46
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 80 6e-46
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 83 6e-46
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 85 8e-46
emb|CAN67449.1| hypothetical protein VITISV_031400 [Vitis vinifera] 80 7e-45
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis] 83 7e-45
gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposo... 80 1e-44
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 79 1e-44
emb|CAN75973.1| hypothetical protein VITISV_019857 [Vitis vinifera] 82 2e-44
emb|CAN70357.1| hypothetical protein VITISV_013713 [Vitis vinifera] 79 2e-44
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 74 2e-44
ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668... 80 3e-44
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera] 79 4e-44
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 77 7e-44
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 80.1 bits (196), Expect(5) = 6e-49
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = -3
Query: 981 WEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKLE 808
W ++ +DVK+ FLNG++E E+Y+ P G+ E R K++Y LKQAPRAWY +++
Sbjct: 939 WRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERID 998
Query: 807 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+ + GF + D L++K +GE+ +I++ +VD LI
Sbjct: 999 SYFIQNGFARSMNDAALYSK-KKGEDVLIVSLYVDDLI 1035
Score = 70.9 bits (172), Expect(5) = 6e-49
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
+RP++ Y +YL+R+ +P I HY+ A + +Y+KGT ++ Y D+++
Sbjct: 1140 SRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDW 1199
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
S D KST GY+ +G + W S KQ+ VA+ST E EY A
Sbjct: 1200 GGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIA 1242
Score = 60.1 bits (144), Expect(5) = 6e-49
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K +K+ FE+TDLG + ++G+++++ +G L+QE YA KLID++ +K +K + P+
Sbjct: 1048 KKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTP 1107
Query: 481 GGK---FESD--QFVDK**YQAIIRNLIYL--TIPDRTY 386
GK E D +F D Y+ I+ L+YL + PD Y
Sbjct: 1108 QGKRKGVEGDDKEFADPTKYRRIVGGLLYLCASRPDVMY 1146
Score = 42.0 bits (97), Expect(5) = 6e-49
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 987
RLVA+G++Q GIDY +TFAP ++ TIR L++ A +
Sbjct: 900 RLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQ 936
Score = 30.8 bits (68), Expect(5) = 6e-49
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 81 NKLMWLVRLHNEFGVKLQLPININCDN 1
N+ +WL RL +FG+K + I I CDN
Sbjct: 1248 NQAIWLQRLFEDFGLKFKEGIPILCDN 1274
>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 656
Score = 87.0 bits (214), Expect(5) = 6e-49
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = -1
Query: 404 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDAN 225
+TRP+I Y V+ ++R+ H+P H I +Y+KGT +E Y DA+
Sbjct: 446 HTRPDISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDAD 505
Query: 224 FDKSRDGK-STIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
+ S D + ST GY V +GGNL+SW S+KQ VVARST E EYRA
Sbjct: 506 WASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAEYRA 549
Score = 82.0 bits (201), Expect(5) = 6e-49
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Frame = -3
Query: 1002 LNCYKN-NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTNENLS--CRFLKSIYDLKQAP 832
++C N W +H LDVK FL+GD+ E+YM+IP G+ ++ + C+ KS+Y LKQ+P
Sbjct: 241 VSCAVNFGWPLHQLDVKNAFLHGDLHEEVYMEIPPGFGNSQTVGKVCKLKKSLYGLKQSP 300
Query: 831 RAWYTKLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
RAW+ + + + G+ + + D +F K RG N ILA +VD ++
Sbjct: 301 RAWFDRFRHAVCDMGYSQCNGDHTVFYK-HRGTNITILAVYVDDIV 345
Score = 47.4 bits (111), Expect(5) = 6e-49
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+GY+Q GIDY +TFAP AKM +R L+S A
Sbjct: 210 RLVAKGYSQTYGIDYDETFAPVAKMGIVRALVSCA 244
Score = 46.6 bits (109), Expect(5) = 6e-49
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Frame = -2
Query: 667 RC-KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYP 491
RC K RL +FE+ DLG + ++G+++ + G +L+Q Y L+ + + + P
Sbjct: 355 RCLKERLGKAFEVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTDTGMLGCRASTTP 414
Query: 490 MDNGGKF--ESDQFVDK**YQAIIRNLIYL--TIPDRTY 386
+D + +S V+K YQ ++ LIYL T PD +Y
Sbjct: 415 IDRNHQLCAQSGDPVNKEAYQRLVGRLIYLCHTRPDISY 453
Score = 20.8 bits (42), Expect(5) = 6e-49
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -3
Query: 87 SYNKLMWLVRLHNEFGVKLQLPININCDN 1
S ++++W+ L E V + ++CDN
Sbjct: 553 SLSEMLWMRSLLTELRVLRSDTVMLHCDN 581
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 84.7 bits (208), Expect(4) = 1e-47
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = -3
Query: 990 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 817
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K++Y LKQAPRAW T
Sbjct: 905 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 964
Query: 816 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 965 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1004
Score = 70.1 bits (170), Expect(4) = 1e-47
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ K+ Y D+++
Sbjct: 1107 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1166
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
D KST G++ IG +W S+KQ +V ST E EY A
Sbjct: 1167 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1209
Score = 55.5 bits (132), Expect(4) = 1e-47
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1017 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1076
Query: 481 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1077 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1115
Score = 48.9 bits (115), Expect(4) = 1e-47
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 987
RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 869 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQ 905
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 84.7 bits (208), Expect(4) = 2e-47
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = -3
Query: 990 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 817
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K++Y LKQAPRAW T
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 996
Query: 816 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1036
Score = 70.1 bits (170), Expect(4) = 2e-47
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ K+ Y D+++
Sbjct: 1139 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1198
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
D KST G++ IG +W S+KQ +V ST E EY A
Sbjct: 1199 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVA 1241
Score = 55.5 bits (132), Expect(4) = 2e-47
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1049 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1108
Query: 481 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1147
Score = 48.1 bits (113), Expect(4) = 2e-47
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 987
RLVA+GY Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 901 RLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQ 937
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 83.6 bits (205), Expect(4) = 4e-47
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Frame = -3
Query: 990 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 817
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K +Y LKQAPRAW T
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNT 996
Query: 816 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1036
Score = 70.1 bits (170), Expect(4) = 4e-47
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ K+ Y D+++
Sbjct: 1139 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1198
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
D KST G++ IG +W S+KQ +V ST E EY A
Sbjct: 1199 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1241
Score = 55.5 bits (132), Expect(4) = 4e-47
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1049 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMEC 1108
Query: 481 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1147
Score = 48.5 bits (114), Expect(4) = 4e-47
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 987
RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 901 RLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 83.6 bits (205), Expect(4) = 4e-47
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Frame = -3
Query: 990 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 817
+N W+IH +DVK+ FLNGD+E E+Y++ P+GY E+ R K +Y LKQAPRAW T
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNT 996
Query: 816 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 1036
Score = 70.1 bits (170), Expect(4) = 4e-47
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ K+ Y D+++
Sbjct: 1139 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1198
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
D KST G++ IG +W S+KQ +V ST E EY A
Sbjct: 1199 GGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1241
Score = 55.5 bits (132), Expect(4) = 4e-47
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K + FE+TD+G + Y+G+++ + NG + QE YAK+++ ++K+ ++ + PM+
Sbjct: 1049 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1108
Query: 481 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1109 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1147
Score = 48.5 bits (114), Expect(4) = 4e-47
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 987
RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 901 RLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 81.3 bits (199), Expect(4) = 4e-46
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = -3
Query: 990 KNNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYT 817
+N W+IH +D K FLNGD E E+Y++ P+GY E+ R K++Y LKQAPRAW T
Sbjct: 876 QNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 935
Query: 816 KLEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+++ + K F+K + L+ KI + E+ +I +VD LI
Sbjct: 936 RIDKYFKEKDFIKCPYEHALYIKIQK-EDILIACLYVDDLI 975
Score = 71.6 bits (174), Expect(4) = 4e-46
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I Y V ++R+ +P H+KAA I +YIKGT+ K+ Y D+++
Sbjct: 1078 TRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDW 1137
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
+ D KST G++ IG +W S+KQ +V ST E EY A
Sbjct: 1138 GRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1180
Score = 52.4 bits (124), Expect(4) = 4e-46
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K + FE+TD+G + Y+G+++ + N + QE YAK+++ ++K+ ++ + PM+
Sbjct: 988 KKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMEC 1047
Query: 481 G---GKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
G K E + VD +++++ +L YLT PD Y +
Sbjct: 1048 GIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1086
Score = 48.9 bits (115), Expect(4) = 4e-46
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIATK 987
RLVA+GY+Q GIDY + FAP A++ T+RL+IS+A +
Sbjct: 840 RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQ 876
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 80.1 bits (196), Expect(4) = 6e-46
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = -3
Query: 981 WEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKLE 808
W +H LDV FL+GD+ EIYM P G ENL CR KS+Y LKQA R W++K
Sbjct: 1112 WSLHQLDVNNAFLHGDLHEEIYMSPPPGLRRQGEENLVCRLHKSLYGLKQASRQWFSKFS 1171
Query: 807 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 691
+ G+++ AD +LFT+I +L + DILIT
Sbjct: 1172 KAIQAAGYVQSRADYSLFTRIQGKSFTALLIYVDDILIT 1210
Score = 71.6 bits (174), Expect(4) = 6e-46
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
+RP+I Y V+ L+RF H P LH +AA+ + +Y+K ++ AY D+++
Sbjct: 1310 SRPDITYSVHVLSRFMHQPRKLHMEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYCDSDW 1369
Query: 221 DKSR-DGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL*DYIMS 45
+ST GY V +G +L+SW S++QK V+ S+ E EYRA L L +
Sbjct: 1370 AGCPITRRSTTGYCVFLGPSLVSWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLRD 1429
Query: 44 LG 39
LG
Sbjct: 1430 LG 1431
Score = 51.2 bits (121), Expect(4) = 6e-46
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = -2
Query: 652 LKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGGK 473
L + F + DLG++ ++G+++ NG ++Q YA ++I + L I PM+ G +
Sbjct: 1224 LHSQFRLKDLGDLKYFLGIEVSSSKNGIFISQRKYALEIIKDAGLLGAAPIDTPMERGLR 1283
Query: 472 F--ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
+SD D Y+ ++ LIYLT+ PD TY++
Sbjct: 1284 LSDKSDLLKDPGHYRRLVGRLIYLTVSRPDITYSV 1318
Score = 50.4 bits (119), Expect(4) = 6e-46
Identities = 21/35 (60%), Positives = 31/35 (88%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+TQLEG+DY DTF+P AK++T+ L+++A
Sbjct: 1073 RLVAKGFTQLEGVDYQDTFSPIAKIITVCCLLALA 1107
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 82.8 bits (203), Expect(4) = 6e-46
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I + V+ +++F ++P H+ A + I +YIKG+ K+ Y DA++
Sbjct: 1178 TRPDISFAVSVVSQFLNSPCEDHWNAVIRILKYIKGSPGKGLLYGHNNHTKVVCYSDADW 1237
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL 63
S D +ST GY V IG NLISW S+KQ VVARS+ E EYRA T L L
Sbjct: 1238 AGSPSDRRSTSGYCVSIGDNLISWKSKKQSVVARSSAEAEYRAMASATCELIWL 1291
Score = 72.4 bits (176), Expect(4) = 6e-46
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = -3
Query: 981 WEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT---NENLSCRFLKSIYDLKQAPRAWYTKL 811
W ++ LDVK FLNGD++ EIYM+ P G+ + L CR KS+Y LKQ+PRAW+ K
Sbjct: 978 WPLYQLDVKNAFLNGDLQEEIYMEQPPGFVAQGESSGLVCRLRKSLYGLKQSPRAWFGKF 1037
Query: 810 EDFLVNKGFLKLDADLNLF 754
+ + G + +AD ++F
Sbjct: 1038 SNVVQQFGMTRSEADHSVF 1056
Score = 50.8 bits (120), Expect(4) = 6e-46
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+GYTQ+ G+DY DTF+P AKM ++RL I++A
Sbjct: 939 RLVAKGYTQIFGLDYGDTFSPVAKMASVRLFIAMA 973
Score = 47.4 bits (111), Expect(4) = 6e-46
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K L +F+ DLG++ ++G+++ + G +++Q YA +++E L N+K + PMD
Sbjct: 1088 KQHLCQNFQTKDLGKLRYFLGIEVAQSNTGIVISQRKYALDILEEIGLMNSKSVDTPMDP 1147
Query: 481 GGKF---ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
K + + D Y+ ++ L YLT+ PD ++ +
Sbjct: 1148 NVKLLPNQGEPLSDPEKYRRLVGKLNYLTVTRPDISFAV 1186
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 84.7 bits (208), Expect(5) = 8e-46
Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT--NENLSCRFLKSIYDLKQAPRAWYTKL 811
+W++ +DVK FL+G+++ EIYM P G+ + + C+ K++Y LKQAPRAWY K+
Sbjct: 886 DWDLWQMDVKNAFLHGELDREIYMNQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKI 945
Query: 810 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 691
+FL G+ AD +LF K G+ I+L + D++IT
Sbjct: 946 AEFLTQSGYSVTPADSSLFVKANGGKLAIVLVYVDDLIIT 985
Score = 71.2 bits (173), Expect(5) = 8e-46
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
T P+I Y V ++R+ NP H +A I +++KGTI K+ Y DA++
Sbjct: 1086 TXPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADY 1145
Query: 221 DKSRDGK-STIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
D + ST GY+ +G ISW S++Q V+ STTE EYRA
Sbjct: 1146 AGDHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRA 1188
Score = 50.1 bits (118), Expect(5) = 8e-46
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = -2
Query: 667 RCKLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPM 488
R K L FE+ +LG++ ++GL++ + G L Q+ YAK L+ ++ + K I PM
Sbjct: 994 RTKENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLCQQKYAKDLLKKFGMLECKPISTPM 1053
Query: 487 DNGGKF---ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
+ K E D Y+ ++ +L+YLT+ PD +Y +
Sbjct: 1054 EPNAKMCEHEGKDLKDATMYRQLVGSLLYLTLTXPDISYAV 1094
Score = 42.0 bits (97), Expect(5) = 8e-46
Identities = 16/34 (47%), Positives = 28/34 (82%)
Frame = -1
Query: 1094 LVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
LVA+G++Q G+DY +TF+P K+ T+R+L+++A
Sbjct: 849 LVARGFSQQYGLDYDETFSPVXKLTTVRVLLALA 882
Score = 25.0 bits (53), Expect(5) = 8e-46
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 72 MWLVRLHNEFGVKLQLPININCDN 1
MWL+RL N+ + + + CDN
Sbjct: 1197 MWLIRLMNDLHQLVDYAVPLYCDN 1220
>emb|CAN67449.1| hypothetical protein VITISV_031400 [Vitis vinifera]
Length = 1618
Score = 80.1 bits (196), Expect(4) = 7e-45
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKL 811
+W + LD+K FLNGD+E E+YM+IP G+ + N C+ KS+Y LKQ+PRAW+ +
Sbjct: 1208 DWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMANNQVCKLQKSLYGLKQSPRAWFDRF 1267
Query: 810 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
++ G+ + AD LF K +IL +VD +I
Sbjct: 1268 TKAVLKLGYKQGQADHTLFVKKSHAGKMVILIVYVDDII 1306
Score = 74.3 bits (181), Expect(4) = 7e-45
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -1
Query: 404 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDAN 225
+TRP+I + V+ +++F H P H +A I +Y+K T IE Y DA+
Sbjct: 1408 HTRPDIGFXVSAVSQFMHXPTEEHMEAVYRILRYLKMTPGKGLFFRKTENRDIEVYSDAD 1467
Query: 224 FDKSR-DGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
+ ++ D +ST GY + GNL++W S+KQ VVARS+ E EYRA
Sbjct: 1468 WARNIIDRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEYRA 1511
Score = 49.7 bits (117), Expect(4) = 7e-45
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+TQ GIDY TFAP AK+ TIR+L+S+A
Sbjct: 1170 RLVARGFTQSYGIDYQKTFAPVAKLNTIRILLSLA 1204
Score = 45.8 bits (107), Expect(4) = 7e-45
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = -2
Query: 667 RCKLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPM 488
+ K L FE+ DLG + ++G+++ + G +++Q Y L+ E + K I PM
Sbjct: 1317 KLKKYLSEEFEVKDLGNLKYFLGMEVARSRKGIVVSQRKYILDLLKETGMLGCKPIDTPM 1376
Query: 487 DNGGKF---ESDQFVDK**YQAIIRNLIYL--TIPD 395
D+ K + VD+ YQ ++ LIYL T PD
Sbjct: 1377 DSQKKLGIEKESTSVDRGRYQRLVGRLIYLSHTRPD 1412
>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
Length = 1385
Score = 83.2 bits (204), Expect(4) = 7e-45
Identities = 39/98 (39%), Positives = 55/98 (56%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTNENLSCRFLKSIYDLKQAPRAWYTKLED 805
+W + LDVK FLNG++ E+YM P GY E + CR +S+YDLKQAPRAW+ +
Sbjct: 981 HWSVSQLDVKNAFLNGELREEVYMHPPPGYSVPEGMVCRLRRSLYDLKQAPRAWFERFSS 1040
Query: 804 FLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 691
+ GF D D LF ++L + D++IT
Sbjct: 1041 VVTAAGFSASDHDPALFVHTSSRGRTLLLLYVDDMIIT 1078
Score = 76.6 bits (187), Expect(4) = 7e-45
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I YPV+ L++F P +HY + + +Y++GTI +++AY DA +
Sbjct: 1179 TRPDITYPVHILSQFVSAPTQVHYSHLLRVLRYLRGTISRRLFFPRSSSLQLQAYSDATW 1238
Query: 221 -DKSRDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL 63
D +S Y V +GG+LI+W ++KQ V+RS+ E E RA LT + L
Sbjct: 1239 ASDPSDRRSISAYCVFLGGSLIAWKTKKQTAVSRSSAEAELRAMALLTAEITWL 1292
Score = 45.4 bits (106), Expect(4) = 7e-45
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K L F ++DLG + ++G+++ +G+ ++QE Y + L+D L + + + PM+
Sbjct: 1089 KAHLSEQFLMSDLGPLRYFLGIEVTSTPDGFFMSQEKYIQDLLDHASLTDQRTVETPMEL 1148
Query: 481 GGKF---ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
+ + D Y+ ++ +L+YL + PD TY +
Sbjct: 1149 NVHLRPSDGEPLSDPTRYRHLVGSLVYLAVTRPDITYPV 1187
Score = 44.7 bits (104), Expect(4) = 7e-45
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIAT 990
RLVA+G+ Q G DY +TFAP A M T+R L+S+A+
Sbjct: 943 RLVARGFQQEHGRDYDETFAPVAHMTTVRTLLSVAS 978
>gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 3263
Score = 80.5 bits (197), Expect(4) = 1e-44
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKL 811
+W + LD+K FLNGD+E E+YM+IP G+ + +N C+ KS+Y LKQ+PRAW+ +
Sbjct: 1077 DWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEGSMTKNQVCKLRKSLYGLKQSPRAWFDRF 1136
Query: 810 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
++ G+++ +D LF K E IL +VD +I
Sbjct: 1137 TKAVLKLGYVQGQSDHTLFVKKSHAEKIAILIVYVDDII 1175
Score = 72.0 bits (175), Expect(4) = 1e-44
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 404 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDAN 225
+TRP+I + V+ +++F H+P H +A + +Y+K T E Y DA+
Sbjct: 1277 HTRPDIGFAVSVVSQFMHSPTEEHMEAVYRVLRYLKMTPGKGLFFIKTENRNTEVYSDAD 1336
Query: 224 FDKSR-DGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
+ + D +ST GY + GNL++W S+KQ VVARS+ E EYRA
Sbjct: 1337 WAGNLIDRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEYRA 1380
Score = 50.8 bits (120), Expect(4) = 1e-44
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+TQ GIDY +TFAP AK+ TIR+L+S+A
Sbjct: 1039 RLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLA 1073
Score = 45.4 bits (106), Expect(4) = 1e-44
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K L FE+ DLG + ++G+++ + G +++Q Y L+ E + K + PMD+
Sbjct: 1188 KKYLSEEFEVKDLGNLKYFLGMEVARSSKGIVVSQRKYILDLLKETGMLGCKPVDTPMDS 1247
Query: 481 GGKFESDQF---VDK**YQAIIRNLIYL--TIPD 395
K +++ VD+ YQ ++ LIYL T PD
Sbjct: 1248 QKKLGTEKESAPVDRGRYQRLVGRLIYLSHTRPD 1281
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 79.0 bits (193), Expect(4) = 1e-44
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP++ Y +N + +F H P LH+ A I + I+ TI + A+ DA++
Sbjct: 1228 TRPDLSYAINRVCQFLHAPTDLHWTAVKRILRNIQHTIGLGLTIRPSLSLMLSAFSDADW 1287
Query: 221 DKSRDG-KSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL*DYIMS 45
D KST GY + +G NLISW S+KQ V+RS+TE EY+A + T + L +
Sbjct: 1288 AGCPDDRKSTGGYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEVIWLQSLLHE 1347
Query: 44 LG 39
LG
Sbjct: 1348 LG 1349
Score = 78.2 bits (191), Expect(4) = 1e-44
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = -3
Query: 981 WEIHHLDVKTIFLNGDIE*EIYMKIPKGYP--TNENLSCRFLKSIYDLKQAPRAWYTKLE 808
W + LDV+ FL+G +E +YMK P G+ T+ N C KS+Y LKQ PRAWY++L
Sbjct: 1027 WSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLS 1086
Query: 807 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 691
+ L + GF+ AD++LF IL + DI+IT
Sbjct: 1087 EKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIIT 1125
Score = 45.8 bits (107), Expect(4) = 1e-44
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+ Q GIDY DTF+P K TIRL++S+A
Sbjct: 988 RLVAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLA 1022
Score = 45.8 bits (107), Expect(4) = 1e-44
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Frame = -2
Query: 655 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPM---- 488
+LK+ F I DLG++ ++G+++H+ +G +L QE YA+ L+ ++ K + P+
Sbjct: 1138 KLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVATSE 1197
Query: 487 ---DNGGKFESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
+ G S + K Y++++ L YLT+ PD +Y I
Sbjct: 1198 KLSASAGTLLSPEETTK--YRSVVGALQYLTLTRPDLSYAI 1236
>emb|CAN75973.1| hypothetical protein VITISV_019857 [Vitis vinifera]
Length = 687
Score = 82.4 bits (202), Expect(4) = 2e-44
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKL 811
+W + LD+K FLNGD+E E+YM+IP G+ + +N C+ KS+YDLKQ+PRAW+ +
Sbjct: 277 DWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEGSMAKNQVCKLQKSLYDLKQSPRAWFDRF 336
Query: 810 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
++ G+ + AD LF K IL +VD++I
Sbjct: 337 TKAVLKLGYQQGQADHTLFVKKSHVGKMAILIVYVDVII 375
Score = 71.6 bits (174), Expect(4) = 2e-44
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 404 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDAN 225
+TRP+I + V+ +++F H+P H +A I +Y+K T E Y DA+
Sbjct: 477 HTRPDIGFAVSAVSQFMHSPTEEHMEAVYKILRYLKMTPGKGLFFRKTENRDTEVYSDAD 536
Query: 224 FDKSR-DGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
+ + D +ST GY + GNL++W S+KQ VVARS+ E EYRA
Sbjct: 537 WAGNIIDRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEYRA 580
Score = 50.8 bits (120), Expect(4) = 2e-44
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+TQ GIDY +TFAP AK+ TIR+L+S+A
Sbjct: 239 RLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLA 273
Score = 43.5 bits (101), Expect(4) = 2e-44
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K L FE+ DLG + ++G+++ + G +++Q Y L+ E + K I PMD+
Sbjct: 388 KKYLSKEFEVKDLGNLKYFLGMEVARSRKGIVVSQRKYILDLLKETGMLGCKPIDTPMDS 447
Query: 481 GGKF---ESDQFVDK**YQAIIRNLIYL--TIPD 395
K + VD+ YQ + LIYL T PD
Sbjct: 448 QKKLGIEKESTPVDRGRYQRLFGRLIYLSHTRPD 481
>emb|CAN70357.1| hypothetical protein VITISV_013713 [Vitis vinifera]
Length = 1568
Score = 79.0 bits (193), Expect(4) = 2e-44
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKL 811
NW + LD+K FLNGD+E E+YM+IP G+ + +N C+ KS+Y LKQ+PRAW+ +
Sbjct: 1158 NWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEGSMAKNQVCKLQKSLYGLKQSPRAWFDRF 1217
Query: 810 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
++ G+ + D LF K IL +VD +I
Sbjct: 1218 TKAVLKLGYKQGQTDHTLFVKKSHAGKMXILIVYVDDII 1256
Score = 72.4 bits (176), Expect(4) = 2e-44
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -1
Query: 404 NTRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDAN 225
+TRP+I + V+ +++F H+P H +A I +Y+K T E Y DA+
Sbjct: 1358 HTRPDIGFAVSAVSQFMHSPTEEHMEAVYRILRYLKMTPXKGLFFRKIENRDTEVYSDAD 1417
Query: 224 F-DKSRDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
+ + D +ST GY + GNL++W S+KQ V+ARS+ E EYRA
Sbjct: 1418 WVENIIDRRSTFGYCSFVWGNLVTWRSKKQSVLARSSAEAEYRA 1461
Score = 50.8 bits (120), Expect(4) = 2e-44
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+TQ GIDY +TFAP AK+ TIR+L+S+A
Sbjct: 1120 RLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLA 1154
Score = 45.8 bits (107), Expect(4) = 2e-44
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K L FE+ DLG + ++G+++ + G I++Q Y L+ E + K I PMD+
Sbjct: 1269 KKYLSEEFEVKDLGNLKYFLGMEVARSRKGIIVSQRKYILNLLKETGMLGCKPIDXPMDS 1328
Query: 481 GGKF---ESDQFVDK**YQAIIRNLIYL--TIPD 395
K + VD+ YQ ++ LIYL T PD
Sbjct: 1329 QKKLGIEKESTPVDRGRYQRLVGRLIYLSHTRPD 1362
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 73.9 bits (180), Expect(4) = 2e-44
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = -3
Query: 975 IHHLDVKTIFLNGDIE*EIYMKIPKGYPTN--ENLSCRFLKSIYDLKQAPRAWYTKLEDF 802
IH +DV FL+GD+ EIYM P G ENL CR KS+Y LKQA R W+ K +
Sbjct: 1093 IHQMDVNNAFLHGDLHEEIYMSPPLGLRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEA 1152
Query: 801 LVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 691
+ + G+ + AD +LFT+ +L + DILIT
Sbjct: 1153 IQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDILIT 1189
Score = 67.4 bits (163), Expect(4) = 2e-44
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
+RP+I Y V+ L+RF H P H +AA + +Y+K ++ Y D+++
Sbjct: 1289 SRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRXYCDSDW 1348
Query: 221 DKSR-DGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL*DYIMS 45
+ST GY V +G +LISW S++QK V+ S+ E EYRA L L +
Sbjct: 1349 AGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLKD 1408
Query: 44 LG 39
LG
Sbjct: 1409 LG 1410
Score = 54.3 bits (129), Expect(4) = 2e-44
Identities = 22/35 (62%), Positives = 33/35 (94%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+G+TQLEG+DY DTF+PTAK++++R L+++A
Sbjct: 1052 RLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLALA 1086
Score = 52.4 bits (124), Expect(4) = 2e-44
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Frame = -2
Query: 652 LKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGGK 473
L + F + DLG++ ++G+++ NG ++Q YA ++I++ L I PM+ G K
Sbjct: 1203 LHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGLLGAAPIDTPMERGLK 1262
Query: 472 F--ESDQFVDK**YQAIIRNLIYLTI--PDRTYNI 380
+SD D+ Y+ ++ LIYLT+ PD TY +
Sbjct: 1263 LSDKSDLLKDQGRYRRLVGRLIYLTVSRPDITYAV 1297
>ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668041 [Glycine max]
Length = 1176
Score = 79.7 bits (195), Expect(4) = 3e-44
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRP+I + V +++F NP + H+ A M I +Y+K ++ Y DA++
Sbjct: 967 TRPDISFAVGVISQFMQNPHLDHWNAVMRILRYVKRAPGQGLLYEDKGSTQLSGYCDADW 1026
Query: 221 DKS-RDGKSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFGDLTINLCGL*DYIMS 45
D +ST GY V IGGNLISW S+KQ VVA S+ E EYR+ +T L + ++
Sbjct: 1027 AGCPMDRRSTSGYYVFIGGNLISWKSKKQTVVAWSSAEAEYRSMAMVTCELMWIKQFLQE 1086
Query: 44 L 42
L
Sbjct: 1087 L 1087
Score = 68.6 bits (166), Expect(4) = 3e-44
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = -3
Query: 984 NWEIHHLDVKTIFLNGDIE*EIYMKIPKGYPT--NENLSCRFLKSIYDLKQAPRAWYTKL 811
+W +H LD+K FL+GD+E +IYM+ P G+ L C+ +S+Y LKQ+PRAW+ K
Sbjct: 766 HWPLHQLDIKNAFLHGDLEEDIYMEQPPGFVAQGEYGLVCKLRRSLYGLKQSPRAWFGKF 825
Query: 810 EDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+ G + +AD ++F + L +VD ++
Sbjct: 826 SHVVQMFGLKRSEADHSVFYYHTSPGKCVYLMVYVDDIV 864
Score = 50.1 bits (118), Expect(4) = 3e-44
Identities = 21/35 (60%), Positives = 30/35 (85%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+GYTQ+ GI+Y DTF+P AK+ T+RL +++A
Sbjct: 728 RLVAKGYTQVYGIEYCDTFSPVAKLTTVRLFLAMA 762
Score = 49.3 bits (116), Expect(4) = 3e-44
Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = -2
Query: 661 KLRLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDN 482
K L + F+ DLG + ++G+++ + +G +++Q+ YA +++E ++N + + PMD
Sbjct: 877 KEHLFSHFQTKDLGSLKYFLGIEVAQSGDGIVISQKKYALDILEETGMQNCRPVESPMDP 936
Query: 481 GGKFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 380
K +DQ + D Y+ ++ LIYLTI PD ++ +
Sbjct: 937 NLKLMADQSEAYPDPERYRRLVGKLIYLTITRPDISFAV 975
>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
Length = 1379
Score = 79.0 bits (193), Expect(4) = 4e-44
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
TRPN+ + +N +++F H P +H++A I +Y++GT+ + AY DA++
Sbjct: 578 TRPNLAHSINSVSQFLHAPTEVHFQAVKRILRYVQGTLHFGLKFTSCSSMGLVAYSDADW 637
Query: 221 DKSRDGK-STIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRA 96
D + ST GY + +G NL+SW+++KQ V+RS+ E EYRA
Sbjct: 638 AGCPDTRRSTSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRA 680
Score = 73.9 bits (180), Expect(4) = 4e-44
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = -3
Query: 987 NNWEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTK 814
+ W + LDVK FLNG + +YM+ P GY P + C+ K++Y LKQAPRAW+ +
Sbjct: 378 HKWPLRQLDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVCKLKKALYGLKQAPRAWFQR 437
Query: 813 LEDFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILIT 691
FL+ GF AD +LF + + +L + DI++T
Sbjct: 438 FSSFLLKLGFFCSRADTSLFVFTKKDDLIYLLLYVDDIILT 478
Score = 50.4 bits (119), Expect(4) = 4e-44
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVA+GYTQL G+DY DTF+P K T+R+++S+A
Sbjct: 341 RLVAKGYTQLPGLDYKDTFSPVVKASTVRVVLSLA 375
Score = 43.9 bits (102), Expect(4) = 4e-44
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = -2
Query: 655 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 476
+L + F + DLG + ++GL++ + +G+ L+Q YA ++ +L ++K + PM
Sbjct: 491 QLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQ 550
Query: 475 KFESD--QFVDK**YQAIIRNLIYLTI 401
+ S+ F D Y++++ L YLTI
Sbjct: 551 RLSSEGTPFADPTLYRSLVGALQYLTI 577
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 77.4 bits (189), Expect(4) = 7e-44
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = -3
Query: 981 WEIHHLDVKTIFLNGDIE*EIYMKIPKGY--PTNENLSCRFLKSIYDLKQAPRAWYTKLE 808
++++ +DVK+ FLNG + E+Y++ PKG+ PT+ + R K++Y LKQAPRAWY +L
Sbjct: 1170 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1229
Query: 807 DFLVNKGFLKLDADLNLFTKILRGENKIILAFHVDILI 694
+FL +G+ K D LF K EN +I +VD ++
Sbjct: 1230 EFLTQQGYRKGGIDKTLFVK-QDAENLMIAQIYVDDIV 1266
Score = 68.2 bits (165), Expect(4) = 7e-44
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = -1
Query: 401 TRPNIQYPVNYLARFKHNPIILHYKAAMMIFQYIKGTIXXXXXXXXXXXXKIEAYYDANF 222
+RP+I Y V AR++ NP I H I +Y+ GT + Y DA++
Sbjct: 1369 SRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADW 1428
Query: 221 DKSRDG-KSTIGYLVKIGGNLISWTSQKQKVVARSTTEEEYRAFG 90
S D KST G +G NLISW S+KQ V+ ST E EY A G
Sbjct: 1429 AGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1473
Score = 53.1 bits (126), Expect(4) = 7e-44
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = -1
Query: 1097 RLVAQGYTQLEGIDYTDTFAPTAKMMTIRLLISIA 993
RLVAQGYTQ+EG+D+ +TFAP A++ +IRLL+ +A
Sbjct: 1131 RLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVA 1165
Score = 47.8 bits (112), Expect(4) = 7e-44
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = -2
Query: 655 RLKNSFEITDLGEVFCYVGLQLHKVLNGYILNQEAYAKKLIDEYKLKNNKGIIYPMDNGG 476
++++ FE++ +GE+ ++GLQ+ ++ + L+Q YAK ++ ++ ++N P
Sbjct: 1281 QMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHL 1340
Query: 475 KFESDQ---FVDK**YQAIIRNLIYLTI--PDRTYNI 380
K D+ VD+ Y+++I +L+YLT PD TY +
Sbjct: 1341 KLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAV 1377