BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00018179
         (1541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006281709.1| hypothetical protein CARUB_v10027858mg [Caps...    74   2e-10
ref|XP_006307496.1| hypothetical protein CARUB_v10009120mg [Caps...    63   3e-07
ref|XP_003616427.1| F-box protein [Medicago truncatula] gi|35551...    62   5e-07
ref|XP_004289768.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    61   1e-06
ref|NP_173137.1| F-box/RNI-like/FBD-like domains-containing prot...    60   2e-06

>ref|XP_006281709.1| hypothetical protein CARUB_v10027858mg [Capsella rubella]
            gi|482550413|gb|EOA14607.1| hypothetical protein
            CARUB_v10027858mg [Capsella rubella]
          Length = 427

 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 90/366 (24%), Positives = 147/366 (40%), Gaps = 2/366 (0%)
 Frame = -1

Query: 1430 LDRLSNLPDEILLEILCRTKSYKTCVASSSLSKRWKDLYLHIPDICFEDLMEPQFPKDTK 1251
            +DRLS L DE+LL+IL    S K  V++  LSKRW+ L+  +P + ++D  +        
Sbjct: 1    MDRLSYLHDEVLLDILSFLPSAKEVVSTMVLSKRWRFLWKMVPRLVYDDSYQ-------T 53

Query: 1250 TFKDRIETFNDIIRTAVSRHRTEIRTLSLHELPESVTRDCLRFASSITTIKNLVIDHYLF 1071
            T K    TF D             R+L LH+ P     + L F      +  +    Y  
Sbjct: 54   TEKGNFSTFVD-------------RSLVLHKAP---VLETLHF-----KLGKISGSGYTL 92

Query: 1070 SHNGCYYPLVRSPYTRPNFFPSDDDTPLASFFNNYSNLVTLELSRCTINRATQGLSETFL 891
                 Y   VR      +  PS   TP+   ++ YS + T+  S    N      S   +
Sbjct: 93   VSAADYKSCVRELVVEIDISPSSSQTPVVVPWSLYSRICTMLASLILHNVVLVEFSAP-V 151

Query: 890  GFPCLESCIFKDVDFDGVQWMRKIFVLSPMLRTIKLVRCRFSKL-ELKISCPTVKTMVID 714
             FP L+    K V + G + + K+    P+L  + + +C+   L  L++  P++K + + 
Sbjct: 152  SFPSLKELELKSVKYSGNESVNKLISSCPVLEYLAVEQCKGDNLTTLRVRVPSLKRLSLI 211

Query: 713  GYLFWMCKHLVLQCPNLADLTVDFKFLESLHVSSSLDMLTITSIPKPSASLWNVLT-NTI 537
             +   +    V+  P+L  L +    L S  V S++  +   SI      LW+  T   +
Sbjct: 212  EHENNVVHEFVIDAPSLERLKIVDYSLGSRIVESNMSRIITASI-----DLWSPQTEQLL 266

Query: 536  QSKHLSFNFGDIFPTQVSSVARNKIPVREVLAESVVLCFRKFGEEESQFASHVLGKCPNL 357
             S   + +F    P      +++  PV  +    V L       E       VL   PNL
Sbjct: 267  DSLTSAKSFFLCLPN-----SKDAYPVGRIFRSLVHLTICTCETEWLNVLIRVLRDSPNL 321

Query: 356  SVLFIR 339
              L I+
Sbjct: 322  KSLKIQ 327


>ref|XP_006307496.1| hypothetical protein CARUB_v10009120mg [Capsella rubella]
            gi|482576207|gb|EOA40394.1| hypothetical protein
            CARUB_v10009120mg [Capsella rubella]
          Length = 449

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 7/292 (2%)
 Frame = -1

Query: 1454 SMESKGLVLDRLSNLPDEILLEILCRTKSYKTCVASSSLSKRWKDLYLHIPDICFEDLME 1275
            S++ K    DR+SNLPD +L  IL    S K  V++S LSKRW++L+ H+P +   DL  
Sbjct: 6    SVKEKQRNSDRISNLPDSLLCRILSDL-STKESVSTSVLSKRWRNLWFHVPAL---DLDS 61

Query: 1274 PQFPKDTKTFKDRIETFNDIIRTAVSRHRTEIRTLSLHELPESVTRDCLRFASSITTIKN 1095
              FP D   F   ++ F   + +   +H    + +      E    D  RF S I  +  
Sbjct: 62   GNFPNDDNDFVSFLDKF---LGSENEQHLNRFKLIY-----EVYEHDVSRFNSWINAMVR 113

Query: 1094 LVIDHYLFSHNGCYYPLVRSPYTRPNFFPSDDDTPLASFFNNYSNLVTLELSRCTINRAT 915
              + H+    +     +V+ P   P+ +  +             +LV L L R  +    
Sbjct: 114  RRVCHFDVHSDVDDDEIVKMP---PSLYSCE-------------SLVNLRLYRVVL---- 153

Query: 914  QGLSETFLGFPCLESCIFKDVDFDGVQWMRKIFVLSPMLRTIKLVRCRFSKLELK-ISCP 738
              L    +  PC++      V +D    +  +    P+L+ + +VR     LE+  +   
Sbjct: 154  --LHPESVLLPCVKIMHLDMVKYDADSTLESLISSCPVLQDLTIVRDPNDSLEVVCVRSK 211

Query: 737  TVKTMVIDGYLFWMCKHLV------LQCPNLADLTVDFKFLESLHVSSSLDM 600
            ++K+  ID   +    H+V      L+  NL+D   D   + S+  S+ +D+
Sbjct: 212  SLKSFTIDSERWESENHVVAIDAPRLEYMNLSDHRSDSFIIHSIGPSAKVDI 263


>ref|XP_003616427.1| F-box protein [Medicago truncatula] gi|355517762|gb|AES99385.1| F-box
            protein [Medicago truncatula]
          Length = 391

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 22/285 (7%)
 Frame = -1

Query: 1430 LDRLSNLPDEILLEILCRTKSYKTCVASSSLSKRWKDLYLHIPDICFEDLMEPQFPKDTK 1251
            +DR S L D  LL I+  +  +K  V +S+LSK W+++     +I F +L   +F +  +
Sbjct: 4    IDRFSLLHDS-LLSIIVSSLPFKDAVKTSTLSKDWENVCKLTRNIEFNELFFIKFDQPHE 62

Query: 1250 TFKDRIETFNDIIRTAVSRHRTEI-----RTLSLHELPESVTRDCLRFASSITTIKNLVI 1086
                +   F D ++  +  H          T+S H +       C+RFA     +K+L +
Sbjct: 63   IVHSQRMAFLDFMKKGIENHGENAIDKFSLTMSAHNVFSEDIDRCIRFAIR-NEVKDLEL 121

Query: 1085 DHYLFSHNGCYYPLVRSPYTRPNFFPSDDDTPLASFFNNYSNLVTLELSRCTINRAT--- 915
            D    + N       +  +   NF  S D   L+S+   YS L +L+L  C  + +    
Sbjct: 122  DFTSPTWN-------KDEFYYNNFVASVD---LSSYVYEYSGLQSLKLYSCDFSASEMVN 171

Query: 914  -QGLSETFLGFPCLESC----------IFKDVDFDGVQWMRKIFVLSPM---LRTIKLVR 777
               L E  LGF  +  C          + + ++F    W    F+L      L+ + + R
Sbjct: 172  FHSLKEISLGFMRVSICAIEALLTNCEMLESLNFYKC-WSLDEFILKGEYLGLKKLVINR 230

Query: 776  CRFSKLELKISCPTVKTMVIDGYLFWMCKHLVLQCPNLADLTVDF 642
            C F     +I+ P +K     G LF     + +Q P L ++ +DF
Sbjct: 231  CHFKSSTFRINAPNLKVFDYHGSLF----DIDIQSPALDEVNLDF 271


>ref|XP_004289768.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Fragaria
            vesca subsp. vesca]
          Length = 422

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
 Frame = -1

Query: 1445 SKG-LVLDRLSNLPDEILLEIL-CRTKSYKTCVASSSLSKRWKDLYLHIPDICFEDLMEP 1272
            SKG + LDR+SNLP++++ +IL C T   K  V +S LS  WKD +  +  + F      
Sbjct: 11   SKGEMELDRISNLPNDVIDKILSCLT--LKEAVRTSVLSSMWKDKWAMLSGLVF------ 62

Query: 1271 QFPKDTKTFK-DRIETFNDIIRTAVSRHRTEIRTLSLHELPESVTRDCLRFASSITTIKN 1095
                D K F  D  ETF +I+   +  H   I    L       +RD  R+   ++  +N
Sbjct: 63   ----DGKCFSTDNCETFVNIVYHVLLSHIGPIEKFVLSNTHRIPSRDIDRWILHLS--RN 116

Query: 1094 LVIDHYLFSHNGCYYPLVRSPYTRPNFFPSDDDTPLASFFNNYSNLVTLELSRCTINRAT 915
             +    +F  +   Y +                 PL   F +Y +++ L+LS C +    
Sbjct: 117  CI---KVFELHWARYKM-----------------PLC--FYSYQDMIELKLSWCLLKP-- 152

Query: 914  QGLSETFLGFPCLESCIFKDVDFDGVQWMRKIFVLSPMLRTIKLVRCRFSKLELKISCPT 735
                 TF GF  L+   FK V       +  + + SP+L ++++++C  +   LKI  P 
Sbjct: 153  ---PRTFNGFRTLKRVSFKFVTL-ARDVLENLILSSPLLESLEIIKCA-ACTHLKIDAPN 207

Query: 734  VKTMVIDGYL 705
            ++ +   GYL
Sbjct: 208  LRFLYFSGYL 217


>ref|NP_173137.1| F-box/RNI-like/FBD-like domains-containing protein [Arabidopsis
            thaliana] gi|75263252|sp|Q9FZ52.1|FDL3_ARATH RecName:
            Full=F-box/FBD/LRR-repeat protein At1g16930
            gi|9802769|gb|AAF99838.1|AC051629_5 Hypothetical protein
            [Arabidopsis thaliana] gi|332191402|gb|AEE29523.1|
            F-box/RNI-like/FBD-like domains-containing protein
            [Arabidopsis thaliana]
          Length = 449

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 9/300 (3%)
 Frame = -1

Query: 1454 SMESKGLVLDRLSNLPDEILLEILCRTKSYKTCVASSSLSKRWKDLYLHIPDICFEDLME 1275
            S++ K    DR+SNLPD +L +IL    S K  V +S LSKRW++L+LH+P +   DL  
Sbjct: 6    SVKEKQRNSDRISNLPDSLLCQILSDL-STKESVCTSVLSKRWRNLWLHVPVL---DLDS 61

Query: 1274 PQFPKDTKTFKDRIETFNDIIRTAVSRHRTEIRTLSLHELPESVTRDCLRFASSITTIKN 1095
              FP D       +   N  + +   +H    +   ++E+ E    D  RF S I  +  
Sbjct: 62   NNFPDDDVF----VSFVNRFLGSENEQHLERFKL--IYEVNE---HDASRFKSWINAVIK 112

Query: 1094 LVIDHYLFSHNGCYYPLVRSPYTRPNFFPSDDDTPLASFFNNYS--NLVTLELSRCTINR 921
              + H+   HN                   DDD  +    + YS   LV L+L R  ++ 
Sbjct: 113  RRVCHFNV-HNEV----------------DDDDELVKMPLSLYSCERLVNLQLYRVALDH 155

Query: 920  ATQGLSETFLGFPCLESCIFKDVDFDGVQWMRKIFVLSPMLRTIKLVRCRFSKLELK-IS 744
                     +  PC++      V +D    +  +    P+L  + +VR     LE+  + 
Sbjct: 156  PES------VSLPCVKIMHLDMVKYDADSTLEILISGCPVLEELTIVRDPNDSLEVVCVR 209

Query: 743  CPTVKTMVIDGYLFWMCKHLV------LQCPNLADLTVDFKFLESLHVSSSLDMLTITSI 582
              ++K+  ID   +    H+V      L+  NL D   D   + ++   + +D+  I ++
Sbjct: 210  SQSLKSFKIDSERYESQNHVVTIDAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDVIFNV 269